RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 JPH4Q96JJ6 628 aa25.21■■□□□ 1.63
TGFBR1-201ENST00000374990 U2SURPO15042 1029 aaKnown RBP25.21■■□□□ 1.63
TGFBR1-201ENST00000374990 ARXQ96QS3 562 aa25.21■■□□□ 1.63
TGFBR1-201ENST00000374990 NLRP13Q86W25 1043 aa25.19■■□□□ 1.62
TGFBR1-201ENST00000374990 C14orf37Q86TY3 774 aa25.19■■□□□ 1.62
TGFBR1-201ENST00000374990 RCAN3Q9UKA8 241 aa25.19■■□□□ 1.62
TGFBR1-201ENST00000374990 NCAPD3P42695 1498 aa25.18■■□□□ 1.62
TGFBR1-201ENST00000374990 ARID4BQ4LE39 1312 aaPredicted RBP25.18■■□□□ 1.62
TGFBR1-201ENST00000374990 CASC1Q6TDU7 716 aa25.17■■□□□ 1.62
TGFBR1-201ENST00000374990 PDE3BQ13370 1112 aa25.16■■□□□ 1.62
TGFBR1-201ENST00000374990 HDGFP51858 240 aaKnown RBP25.15■■□□□ 1.62
TGFBR1-201ENST00000374990 LAS1LQ9Y4W2 734 aaKnown RBP25.14■■□□□ 1.61
TGFBR1-201ENST00000374990 NCLP19338 710 aaKnown RBP25.13■■□□□ 1.61
TGFBR1-201ENST00000374990 HAP1P54257 671 aaPredicted RBP25.13■■□□□ 1.61
TGFBR1-201ENST00000374990 SRPK2P78362 688 aaKnown RBP25.12■■□□□ 1.61
TGFBR1-201ENST00000374990 GGT6Q6P531 493 aa25.12■■□□□ 1.61
TGFBR1-201ENST00000374990 FGD5Q6ZNL6 1462 aa25.12■■□□□ 1.61
TGFBR1-201ENST00000374990 GLIPR1L2Q4G1C9 344 aa25.11■■□□□ 1.61
TGFBR1-201ENST00000374990 HNRNPMP52272 730 aaKnown RBP eCLIP25.11■■□□□ 1.619e-7■■□□□ 14.5
TGFBR1-201ENST00000374990 KIF21BO75037 1637 aa25.1■■□□□ 1.61
TGFBR1-201ENST00000374990 TRIM44Q96DX7 344 aaPredicted RBP25.1■■□□□ 1.61
TGFBR1-201ENST00000374990 TCERG1O14776 1098 aaKnown RBP25.1■■□□□ 1.61
TGFBR1-201ENST00000374990 EIF3AQ14152 1382 aaKnown RBP25.09■■□□□ 1.61
TGFBR1-201ENST00000374990 TSHZ2Q9NRE2 1034 aa25.07■■□□□ 1.6
TGFBR1-201ENST00000374990 PHLDB1Q86UU1 1377 aa25.07■■□□□ 1.6
TGFBR1-201ENST00000374990 PRKRIP1Q9H875 184 aaPredicted RBP25.06■■□□□ 1.6
TGFBR1-201ENST00000374990 SPAG9O60271 1321 aaKnown RBP25.05■■□□□ 1.6
TGFBR1-201ENST00000374990 ZBTB7CA1YPR0 619 aa25.04■■□□□ 1.6
TGFBR1-201ENST00000374990 KIF3BO15066 747 aa25.03■■□□□ 1.6
TGFBR1-201ENST00000374990 FGD6Q6ZV73 1430 aa25.03■■□□□ 1.6
TGFBR1-201ENST00000374990 KIF15Q9NS87 1388 aa25.03■■□□□ 1.6
TGFBR1-201ENST00000374990 GAPVD1Q14C86 1478 aa25.02■■□□□ 1.6
TGFBR1-201ENST00000374990 ERICH3Q5RHP9 1530 aa25.02■■□□□ 1.6
TGFBR1-201ENST00000374990 HDGFL2Q7Z4V5 671 aaPredicted RBP25.01■■□□□ 1.59
TGFBR1-201ENST00000374990 IPO8O15397 1037 aaKnown RBP25.01■■□□□ 1.59
TGFBR1-201ENST00000374990 ST20-MTHFSA0A0A6YYL1 179 aa25■■□□□ 1.59
TGFBR1-201ENST00000374990 GOLGA2Q08379 1002 aa24.99■■□□□ 1.59
TGFBR1-201ENST00000374990 MYOM3Q5VTT5 1437 aa24.99■■□□□ 1.59
TGFBR1-201ENST00000374990 CCDC144AA2RUR9 1427 aa24.99■■□□□ 1.59
TGFBR1-201ENST00000374990 CFAP44Q96MT7 982 aa24.98■■□□□ 1.59
TGFBR1-201ENST00000374990 MYBBP1AQ9BQG0 1328 aaKnown RBP24.98■■□□□ 1.59
TGFBR1-201ENST00000374990 LRRC9Q6ZRR7 1453 aa24.98■■□□□ 1.59
TGFBR1-201ENST00000374990 UACAQ9BZF9 1416 aa24.97■■□□□ 1.59
TGFBR1-201ENST00000374990 U2AF1L5P0DN76 240 aaPredicted RBP24.97■■□□□ 1.59
TGFBR1-201ENST00000374990 U2AF1Q01081 240 aaKnown RBP eCLIP24.97■■□□□ 1.59
TGFBR1-201ENST00000374990 CALD1Q05682 793 aaKnown RBP24.95■■□□□ 1.59
TGFBR1-201ENST00000374990 SAFB2Q14151 953 aaKnown RBP eCLIP24.95■■□□□ 1.58
TGFBR1-201ENST00000374990 ZBED9Q6R2W3 1325 aa24.95■■□□□ 1.58
TGFBR1-201ENST00000374990 CUX1P39880 1505 aa24.93■■□□□ 1.58
TGFBR1-201ENST00000374990 PTPRGP23470 1445 aa24.92■■□□□ 1.58
TGFBR1-201ENST00000374990 CASKIN1Q8WXD9 1431 aa24.92■■□□□ 1.58
TGFBR1-201ENST00000374990 USP47Q96K76 1375 aa24.92■■□□□ 1.58
TGFBR1-201ENST00000374990 RWDD1Q9H446 243 aaPredicted RBP24.91■■□□□ 1.58
TGFBR1-201ENST00000374990 STK26Q9P289 416 aa24.91■■□□□ 1.58
TGFBR1-201ENST00000374990 RRBP1Q9P2E9 1410 aaKnown RBP24.91■■□□□ 1.58
TGFBR1-201ENST00000374990 HSP90AB1P08238 724 aaKnown RBP24.91■■□□□ 1.58
TGFBR1-201ENST00000374990 RAD54L2Q9Y4B4 1467 aa24.9■■□□□ 1.58
TGFBR1-201ENST00000374990 PLEKHG5O94827 1062 aa24.9■■□□□ 1.58
TGFBR1-201ENST00000374990 HSCBQ8IWL3 235 aa24.9■■□□□ 1.58
TGFBR1-201ENST00000374990 CFTRP13569 1480 aa24.9■■□□□ 1.58
TGFBR1-201ENST00000374990 ARAP1Q96P48 1450 aa24.88■■□□□ 1.57
TGFBR1-201ENST00000374990 PRXQ9BXM0 1461 aa24.88■■□□□ 1.57
TGFBR1-201ENST00000374990 TERF2IPQ9NYB0 399 aa24.87■■□□□ 1.57
TGFBR1-201ENST00000374990 MLECQ14165 292 aa24.84■■□□□ 1.57
TGFBR1-201ENST00000374990 PMFBP1Q8TBY8 1022 aa24.84■■□□□ 1.57
TGFBR1-201ENST00000374990 SYNJ1O43426 1573 aa24.83■■□□□ 1.57
TGFBR1-201ENST00000374990 PANK3Q9H999 370 aa24.83■■□□□ 1.56
TGFBR1-201ENST00000374990 STAC3Q96MF2 364 aa24.82■■□□□ 1.56
TGFBR1-201ENST00000374990 IPO9Q96P70 1041 aaKnown RBP24.81■■□□□ 1.56
TGFBR1-201ENST00000374990 WASHC2CQ9Y4E1 1318 aa24.81■■□□□ 1.56
TGFBR1-201ENST00000374990 FYCO1Q9BQS8 1478 aa24.81■■□□□ 1.56
TGFBR1-201ENST00000374990 LMOD2Q6P5Q4 547 aa24.8■■□□□ 1.56
TGFBR1-201ENST00000374990 DEKP35659 375 aaKnown RBP24.8■■□□□ 1.56
TGFBR1-201ENST00000374990 RTF1Q92541 710 aaKnown RBP24.8■■□□□ 1.56
TGFBR1-201ENST00000374990 PTMAP06454 111 aaKnown RBP24.79■■□□□ 1.56
TGFBR1-201ENST00000374990 NGEFQ8N5V2 710 aa24.78■■□□□ 1.56
TGFBR1-201ENST00000374990 CENPJQ9HC77 1338 aaPredicted RBP24.78■■□□□ 1.56
TGFBR1-201ENST00000374990 OS9Q13438 667 aaPredicted RBP24.77■■□□□ 1.56
TGFBR1-201ENST00000374990 CCDC7Q96M83 1385 aa24.77■■□□□ 1.56
TGFBR1-201ENST00000374990 NCOA2Q15596 1464 aa24.77■■□□□ 1.56
TGFBR1-201ENST00000374990 CHMP4AQ9BY43 222 aa24.76■■□□□ 1.55
TGFBR1-201ENST00000374990 L1TD1Q5T7N2 865 aaKnown RBP24.76■■□□□ 1.55
TGFBR1-201ENST00000374990 A0A0G2JS52 829 aa24.75■■□□□ 1.55
TGFBR1-201ENST00000374990 ZRSR1Q15695 479 aaKnown RBP24.75■■□□□ 1.55
TGFBR1-201ENST00000374990 MCCP23508 829 aa24.73■■□□□ 1.55
TGFBR1-201ENST00000374990 ITPRIPQ8IWB1 547 aa24.73■■□□□ 1.55
TGFBR1-201ENST00000374990 SMC4Q9NTJ3 1288 aa24.72■■□□□ 1.55
TGFBR1-201ENST00000374990 TOP2BQ02880 1626 aa24.72■■□□□ 1.55
TGFBR1-201ENST00000374990 SOX12O15370 315 aa24.71■■□□□ 1.55
TGFBR1-201ENST00000374990 KIF7Q2M1P5 1343 aa24.7■■□□□ 1.55
TGFBR1-201ENST00000374990 ZNF644Q9H582 1327 aaPredicted RBP24.7■■□□□ 1.55
TGFBR1-201ENST00000374990 TRAK1Q9UPV9 953 aa24.7■■□□□ 1.54
TGFBR1-201ENST00000374990 KCNJ4P48050 445 aa24.69■■□□□ 1.54
TGFBR1-201ENST00000374990 CCDC146Q8IYE0 955 aa24.69■■□□□ 1.54
TGFBR1-201ENST00000374990 ANKRD50Q9ULJ7 1429 aa24.69■■□□□ 1.54
TGFBR1-201ENST00000374990 VGFO15240 615 aaPredicted RBP24.69■■□□□ 1.54
TGFBR1-201ENST00000374990 RRP1P56182 461 aaKnown RBP24.69■■□□□ 1.54
TGFBR1-201ENST00000374990 EFCAB5A4FU69 1503 aa24.68■■□□□ 1.54
TGFBR1-201ENST00000374990 LMOD3Q0VAK6 560 aa24.68■■□□□ 1.54
TGFBR1-201ENST00000374990 MIA2Q96PC5 1412 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms