RNA–Protein interactions for RNA: ENST00000374945.1

LINC01993-201, Transcript of long intergenic non-protein coding RNA 1993, humanhuman

TSL 2 BASIC

Gene LINC01993, Length 2,934 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01993-201ENST00000374945 ARHGEF11O15085 1522 aa18.13■□□□□ 0.49
LINC01993-201ENST00000374945 ZNF777Q9ULD5 760 aaPredicted RBP18.12■□□□□ 0.49
LINC01993-201ENST00000374945 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.12■□□□□ 0.49
LINC01993-201ENST00000374945 CARMIL2Q6F5E8 1435 aa18.11■□□□□ 0.49
LINC01993-201ENST00000374945 ERICH6Q7L0X2 663 aa18.11■□□□□ 0.49
LINC01993-201ENST00000374945 NAIPQ13075 1403 aa18.09■□□□□ 0.49
LINC01993-201ENST00000374945 CDK11AQ9UQ88 783 aaPredicted RBP18.09■□□□□ 0.49
LINC01993-201ENST00000374945 CHD1O14646 1710 aa18.07■□□□□ 0.48
LINC01993-201ENST00000374945 HFM1A2PYH4 1435 aa18.07■□□□□ 0.48
LINC01993-201ENST00000374945 IRX6P78412 446 aaPredicted RBP18.05■□□□□ 0.48
LINC01993-201ENST00000374945 KIF14Q15058 1648 aa18.04■□□□□ 0.48
LINC01993-201ENST00000374945 FOXD1Q16676 465 aa18.03■□□□□ 0.48
LINC01993-201ENST00000374945 KDM6BO15054 1643 aa18.03■□□□□ 0.48
LINC01993-201ENST00000374945 CFDP1Q9UEE9 299 aaPredicted RBP18.02■□□□□ 0.48
LINC01993-201ENST00000374945 HNRNPUQ00839 825 aaKnown RBP eCLIP18.02■□□□□ 0.48
LINC01993-201ENST00000374945 TROQ12816 1431 aaPredicted RBP18.01■□□□□ 0.47
LINC01993-201ENST00000374945 ERCC6L2Q5T890 1561 aa18.01■□□□□ 0.47
LINC01993-201ENST00000374945 KDM5BQ9UGL1 1544 aa18■□□□□ 0.47
LINC01993-201ENST00000374945 PTPRGP23470 1445 aa18■□□□□ 0.47
LINC01993-201ENST00000374945 MYT1LQ9UL68 1186 aa18■□□□□ 0.47
LINC01993-201ENST00000374945 TCOF1Q13428 1488 aaKnown RBP18■□□□□ 0.47
LINC01993-201ENST00000374945 ERICH6BQ5W0A0 696 aa17.99■□□□□ 0.47
LINC01993-201ENST00000374945 PLEKHD1A6NEE1 506 aa17.99■□□□□ 0.47
LINC01993-201ENST00000374945 ATP10BO94823 1461 aa17.98■□□□□ 0.47
LINC01993-201ENST00000374945 MIA2Q96PC5 1412 aa17.98■□□□□ 0.47
LINC01993-201ENST00000374945 TONSLQ96HA7 1378 aa17.98■□□□□ 0.47
LINC01993-201ENST00000374945 UACAQ9BZF9 1416 aa17.97■□□□□ 0.47
LINC01993-201ENST00000374945 DEKP35659 375 aaKnown RBP17.95■□□□□ 0.46
LINC01993-201ENST00000374945 PPP4R2Q9NY27 417 aa17.95■□□□□ 0.46
LINC01993-201ENST00000374945 ABCC5O15440 1437 aa17.95■□□□□ 0.46
LINC01993-201ENST00000374945 DAPK1P53355 1430 aa17.95■□□□□ 0.46
LINC01993-201ENST00000374945 ABCA8O94911 1581 aa17.94■□□□□ 0.46
LINC01993-201ENST00000374945 GPATCH8Q9UKJ3 1502 aaKnown RBP17.94■□□□□ 0.46
LINC01993-201ENST00000374945 CAMSAP2Q08AD1 1489 aa17.91■□□□□ 0.46
LINC01993-201ENST00000374945 DENND4BO75064 1496 aaPredicted RBP17.89■□□□□ 0.46
LINC01993-201ENST00000374945 MPHOSPH9Q99550 1183 aa17.88■□□□□ 0.45
LINC01993-201ENST00000374945 WASHC2AQ641Q2 1341 aa17.88■□□□□ 0.45
LINC01993-201ENST00000374945 HNRNPMP52272 730 aaKnown RBP eCLIP17.87■□□□□ 0.45
LINC01993-201ENST00000374945 GCC2Q8IWJ2 1684 aa17.86■□□□□ 0.45
LINC01993-201ENST00000374945 DNMT1P26358 1616 aaKnown RBP17.86■□□□□ 0.45
LINC01993-201ENST00000374945 SLC24A1O60721 1099 aa17.85■□□□□ 0.45
LINC01993-201ENST00000374945 CCDC184Q52MB2 194 aa17.85■□□□□ 0.45
LINC01993-201ENST00000374945 B4GALNT3Q6L9W6 998 aa17.84■□□□□ 0.45
LINC01993-201ENST00000374945 NOP58Q9Y2X3 529 aaKnown RBP17.83■□□□□ 0.44
LINC01993-201ENST00000374945 CNTLNQ9NXG0 1405 aa17.83■□□□□ 0.44
LINC01993-201ENST00000374945 SLC4A1APQ9BWU0 796 aaKnown RBP17.82■□□□□ 0.44
LINC01993-201ENST00000374945 CDC42BPAQ5VT25 1732 aa17.82■□□□□ 0.44
LINC01993-201ENST00000374945 ABCC10Q5T3U5 1492 aa17.81■□□□□ 0.44
LINC01993-201ENST00000374945 AKNAQ7Z591 1439 aa17.81■□□□□ 0.44
LINC01993-201ENST00000374945 HSPA5P11021 654 aaKnown RBP17.8■□□□□ 0.44
LINC01993-201ENST00000374945 ADCY10Q96PN6 1610 aa17.8■□□□□ 0.44
LINC01993-201ENST00000374945 ITSN2Q9NZM3 1697 aa17.8■□□□□ 0.44
LINC01993-201ENST00000374945 PAK3O75914 559 aaPredicted RBP17.8■□□□□ 0.44
LINC01993-201ENST00000374945 SHROOM2Q13796 1616 aa17.79■□□□□ 0.44
LINC01993-201ENST00000374945 NCOA1Q15788 1441 aa17.79■□□□□ 0.44
LINC01993-201ENST00000374945 ZBED9Q6R2W3 1325 aa17.78■□□□□ 0.44
LINC01993-201ENST00000374945 ROCK1Q13464 1354 aa17.77■□□□□ 0.44
LINC01993-201ENST00000374945 L3MBTL2Q969R5 705 aa17.75■□□□□ 0.43
LINC01993-201ENST00000374945 NBR1Q14596 966 aa17.74■□□□□ 0.43
LINC01993-201ENST00000374945 TSPY4P0CV99 314 aa17.74■□□□□ 0.43
LINC01993-201ENST00000374945 TSPY10P0CW01 314 aa17.74■□□□□ 0.43
LINC01993-201ENST00000374945 CLASP1Q7Z460 1538 aa17.73■□□□□ 0.43
LINC01993-201ENST00000374945 PRKRIP1Q9H875 184 aaPredicted RBP17.73■□□□□ 0.43
LINC01993-201ENST00000374945 TTC37Q6PGP7 1564 aa17.72■□□□□ 0.43
LINC01993-201ENST00000374945 C9orf84Q5VXU9 1444 aa17.72■□□□□ 0.43
LINC01993-201ENST00000374945 ANKRD30AQ9BXX3 1397 aa17.71■□□□□ 0.43
LINC01993-201ENST00000374945 ABCC2Q92887 1545 aa17.71■□□□□ 0.43
LINC01993-201ENST00000374945 FAM9BQ8IZU0 186 aa17.7■□□□□ 0.42
LINC01993-201ENST00000374945 ANKRD50Q9ULJ7 1429 aa17.7■□□□□ 0.42
LINC01993-201ENST00000374945 CDC42BPBQ9Y5S2 1711 aa17.7■□□□□ 0.42
LINC01993-201ENST00000374945 PKD2Q13563 968 aa17.7■□□□□ 0.42
LINC01993-201ENST00000374945 C11orf95C9JLR9 678 aaPredicted RBP17.69■□□□□ 0.42
LINC01993-201ENST00000374945 CCDC7Q96M83 1385 aa17.69■□□□□ 0.42
LINC01993-201ENST00000374945 EIF4G2P78344 907 aaKnown RBP eCLIP17.68■□□□□ 0.42
LINC01993-201ENST00000374945 ANKRD30BQ9BXX2 1392 aa17.68■□□□□ 0.42
LINC01993-201ENST00000374945 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.68■□□□□ 0.42
LINC01993-201ENST00000374945 SAMD9LQ8IVG5 1584 aa17.68■□□□□ 0.42
LINC01993-201ENST00000374945 PZPP20742 1482 aa17.68■□□□□ 0.42
LINC01993-201ENST00000374945 ARHGAP5Q13017 1502 aa17.68■□□□□ 0.42
LINC01993-201ENST00000374945 CROCC2H7BZ55 1655 aa17.68■□□□□ 0.42
LINC01993-201ENST00000374945 ZNF326Q5BKZ1 582 aaKnown RBP17.68■□□□□ 0.42
LINC01993-201ENST00000374945 MRS2Q9HD23 443 aa17.68■□□□□ 0.42
LINC01993-201ENST00000374945 POLR1AO95602 1720 aaPredicted RBP17.67■□□□□ 0.42
LINC01993-201ENST00000374945 MBD5Q9P267 1494 aa17.66■□□□□ 0.42
LINC01993-201ENST00000374945 NUP155O75694 1391 aa17.66■□□□□ 0.42
LINC01993-201ENST00000374945 KIF15Q9NS87 1388 aa17.66■□□□□ 0.42
LINC01993-201ENST00000374945 ADGBQ8N7X0 1667 aa17.66■□□□□ 0.42
LINC01993-201ENST00000374945 SYCP2Q9BX26 1530 aa17.66■□□□□ 0.42
LINC01993-201ENST00000374945 SMG6Q86US8 1419 aaKnown RBP17.66■□□□□ 0.42
LINC01993-201ENST00000374945 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.65■□□□□ 0.42
LINC01993-201ENST00000374945 NBPF8Q3BBV2 869 aa17.65■□□□□ 0.42
LINC01993-201ENST00000374945 IPO9Q96P70 1041 aaKnown RBP17.64■□□□□ 0.41
LINC01993-201ENST00000374945 RNF123Q5XPI4 1314 aa17.64■□□□□ 0.41
LINC01993-201ENST00000374945 ADGRL2O95490 1459 aa17.64■□□□□ 0.41
LINC01993-201ENST00000374945 ZCCHC11Q5TAX3 1644 aaKnown RBP17.64■□□□□ 0.41
LINC01993-201ENST00000374945 PREX2Q70Z35 1606 aa17.63■□□□□ 0.41
LINC01993-201ENST00000374945 ANO8Q9HCE9 1232 aaPredicted RBP17.62■□□□□ 0.41
LINC01993-201ENST00000374945 CCDC141Q6ZP82 1450 aa17.6■□□□□ 0.41
LINC01993-201ENST00000374945 ANP32AP39687 249 aaKnown RBP17.59■□□□□ 0.41
LINC01993-201ENST00000374945 RPRD2Q5VT52 1461 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms