RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 CFDP1Q9UEE9 299 aaPredicted RBP24.87■■□□□ 1.57
PTPN20-203ENST00000374342 ADGBQ8N7X0 1667 aa24.87■■□□□ 1.57
PTPN20-203ENST00000374342 PREX2Q70Z35 1606 aa24.87■■□□□ 1.57
PTPN20-203ENST00000374342 CHIC2Q9UKJ5 165 aa24.86■■□□□ 1.57
PTPN20-203ENST00000374342 ABCC5O15440 1437 aa24.85■■□□□ 1.57
PTPN20-203ENST00000374342 TTC37Q6PGP7 1564 aa24.84■■□□□ 1.57
PTPN20-203ENST00000374342 CDC42BPBQ9Y5S2 1711 aa24.84■■□□□ 1.57
PTPN20-203ENST00000374342 RRP7BPQ9NSQ0 103 aa24.82■■□□□ 1.56
PTPN20-203ENST00000374342 KDM6BO15054 1643 aa24.82■■□□□ 1.56
PTPN20-203ENST00000374342 KDM5BQ9UGL1 1544 aa24.81■■□□□ 1.56
PTPN20-203ENST00000374342 MYO5CQ9NQX4 1742 aa24.81■■□□□ 1.56
PTPN20-203ENST00000374342 ZNF777Q9ULD5 760 aaPredicted RBP24.8■■□□□ 1.56
PTPN20-203ENST00000374342 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.79■■□□□ 1.56
PTPN20-203ENST00000374342 OSCARQ8IYS5 282 aa24.78■■□□□ 1.56
PTPN20-203ENST00000374342 ROCK1Q13464 1354 aa24.77■■□□□ 1.56
PTPN20-203ENST00000374342 SAMD9LQ8IVG5 1584 aa24.75■■□□□ 1.55
PTPN20-203ENST00000374342 ARHGAP5Q13017 1502 aa24.71■■□□□ 1.55
PTPN20-203ENST00000374342 ARHGEF5Q12774 1597 aa24.7■■□□□ 1.54
PTPN20-203ENST00000374342 ADGRL2O95490 1459 aa24.69■■□□□ 1.54
PTPN20-203ENST00000374342 SHANK2Q9UPX8 1470 aa24.69■■□□□ 1.54
PTPN20-203ENST00000374342 KCNH8Q96L42 1107 aa24.64■■□□□ 1.53
PTPN20-203ENST00000374342 SYCP2Q9BX26 1530 aa24.64■■□□□ 1.53
PTPN20-203ENST00000374342 NCOA1Q15788 1441 aa24.63■■□□□ 1.53
PTPN20-203ENST00000374342 C9orf84Q5VXU9 1444 aa24.63■■□□□ 1.53
PTPN20-203ENST00000374342 WDR7Q9Y4E6 1490 aa24.61■■□□□ 1.53
PTPN20-203ENST00000374342 CCDC141Q6ZP82 1450 aa24.61■■□□□ 1.53
PTPN20-203ENST00000374342 MBD5Q9P267 1494 aa24.61■■□□□ 1.53
PTPN20-203ENST00000374342 TRIM52Q96A61 297 aa24.61■■□□□ 1.53
PTPN20-203ENST00000374342 SIN3AQ96ST3 1273 aa24.61■■□□□ 1.53
PTPN20-203ENST00000374342 ANKRD30AQ9BXX3 1397 aa24.6■■□□□ 1.53
PTPN20-203ENST00000374342 NEUROD1Q13562 356 aa24.58■■□□□ 1.53
PTPN20-203ENST00000374342 ZNF316A6NFI3 1004 aaPredicted RBP24.57■■□□□ 1.52
PTPN20-203ENST00000374342 DENND4BO75064 1496 aaPredicted RBP24.57■■□□□ 1.52
PTPN20-203ENST00000374342 HNRNPMP52272 730 aaKnown RBP eCLIP24.56■■□□□ 1.52
PTPN20-203ENST00000374342 PLCH2O75038 1416 aa24.55■■□□□ 1.52
PTPN20-203ENST00000374342 PLEKHH2Q8IVE3 1493 aa24.54■■□□□ 1.52
PTPN20-203ENST00000374342 MAST1Q9Y2H9 1570 aa24.53■■□□□ 1.52
PTPN20-203ENST00000374342 ABCA9Q8IUA7 1624 aa24.53■■□□□ 1.52
PTPN20-203ENST00000374342 ABCC1P33527 1531 aa24.51■■□□□ 1.51
PTPN20-203ENST00000374342 ACIN1Q9UKV3 1341 aaKnown RBP24.51■■□□□ 1.51
PTPN20-203ENST00000374342 ASXL2Q76L83 1435 aa24.51■■□□□ 1.51
PTPN20-203ENST00000374342 TSPY4P0CV99 314 aa24.51■■□□□ 1.51
PTPN20-203ENST00000374342 TSPY10P0CW01 314 aa24.51■■□□□ 1.51
PTPN20-203ENST00000374342 ARAP3Q8WWN8 1544 aa24.5■■□□□ 1.51
PTPN20-203ENST00000374342 ANKRD50Q9ULJ7 1429 aa24.49■■□□□ 1.51
PTPN20-203ENST00000374342 KIAA1107Q9UPP5 1409 aa24.49■■□□□ 1.51
PTPN20-203ENST00000374342 MPHOSPH9Q99550 1183 aa24.47■■□□□ 1.51
PTPN20-203ENST00000374342 KIF15Q9NS87 1388 aa24.47■■□□□ 1.51
PTPN20-203ENST00000374342 ARHGEF12Q9NZN5 1544 aa24.47■■□□□ 1.51
PTPN20-203ENST00000374342 PLXNC1O60486 1568 aa24.46■■□□□ 1.51
PTPN20-203ENST00000374342 PZPP20742 1482 aa24.45■■□□□ 1.51
PTPN20-203ENST00000374342 TONSLQ96HA7 1378 aa24.45■■□□□ 1.5
PTPN20-203ENST00000374342 RSPH4AQ5TD94 716 aa24.45■■□□□ 1.5
PTPN20-203ENST00000374342 TIMELESSQ9UNS1 1208 aa24.44■■□□□ 1.5
PTPN20-203ENST00000374342 EFCAB2Q5VUJ9 269 aa24.43■■□□□ 1.5
PTPN20-203ENST00000374342 DIEXFQ68CQ4 756 aaKnown RBP24.42■■□□□ 1.5
PTPN20-203ENST00000374342 NPM1P06748 294 aaKnown RBP eCLIP24.41■■□□□ 1.5
PTPN20-203ENST00000374342 RIMBP3CA6NJZ7 1639 aa24.39■■□□□ 1.49
PTPN20-203ENST00000374342 RIMBP3BA6NNM3 1639 aa24.39■■□□□ 1.49
PTPN20-203ENST00000374342 RIMBP3Q9UFD9 1639 aa24.39■■□□□ 1.49
PTPN20-203ENST00000374342 KDM5DQ9BY66 1539 aa24.38■■□□□ 1.49
PTPN20-203ENST00000374342 SLC4A1APQ9BWU0 796 aaKnown RBP24.38■■□□□ 1.49
PTPN20-203ENST00000374342 FANCAO15360 1455 aa24.38■■□□□ 1.49
PTPN20-203ENST00000374342 FOXD1Q16676 465 aa24.37■■□□□ 1.49
PTPN20-203ENST00000374342 TRAPPC8Q9Y2L5 1435 aa24.34■■□□□ 1.49
PTPN20-203ENST00000374342 UNC13BO14795 1591 aa24.33■■□□□ 1.49
PTPN20-203ENST00000374342 ANKRD30BQ9BXX2 1392 aa24.33■■□□□ 1.48
PTPN20-203ENST00000374342 DUOX2Q9NRD8 1548 aa24.32■■□□□ 1.48
PTPN20-203ENST00000374342 ZFYVE16Q7Z3T8 1539 aa24.31■■□□□ 1.48
PTPN20-203ENST00000374342 PPP1R15AO75807 674 aaPredicted RBP24.31■■□□□ 1.48
PTPN20-203ENST00000374342 CFAP74Q9C0B2 1584 aa24.3■■□□□ 1.48
PTPN20-203ENST00000374342 NUP155O75694 1391 aa24.3■■□□□ 1.48
PTPN20-203ENST00000374342 ADGRL1O94910 1474 aa24.29■■□□□ 1.48
PTPN20-203ENST00000374342 RPRD2Q5VT52 1461 aaKnown RBP24.29■■□□□ 1.48
PTPN20-203ENST00000374342 INO80Q9ULG1 1556 aaPredicted RBP24.28■■□□□ 1.48
PTPN20-203ENST00000374342 FAM135AQ9P2D6 1515 aa24.25■■□□□ 1.47
PTPN20-203ENST00000374342 ERBINQ96RT1 1412 aa24.24■■□□□ 1.47
PTPN20-203ENST00000374342 ATP7AQ04656 1500 aa24.24■■□□□ 1.47
PTPN20-203ENST00000374342 PKD2Q13563 968 aa24.23■■□□□ 1.47
PTPN20-203ENST00000374342 IQGAP3Q86VI3 1631 aa24.23■■□□□ 1.47
PTPN20-203ENST00000374342 SPAG9O60271 1321 aaKnown RBP24.22■■□□□ 1.47
PTPN20-203ENST00000374342 TEX14Q8IWB6 1497 aa24.22■■□□□ 1.47
PTPN20-203ENST00000374342 RTEL1-TNFRSF6BF6WH68 1400 aa24.21■■□□□ 1.47
PTPN20-203ENST00000374342 CD109Q6YHK3 1445 aa24.21■■□□□ 1.47
PTPN20-203ENST00000374342 SCAPERQ9BY12 1400 aa24.21■■□□□ 1.47
PTPN20-203ENST00000374342 CYB5RLQ6IPT4 315 aa24.2■■□□□ 1.46
PTPN20-203ENST00000374342 AFAP1Q8N556 730 aa24.2■■□□□ 1.46
PTPN20-203ENST00000374342 MAGI2Q86UL8 1455 aa24.18■■□□□ 1.46
PTPN20-203ENST00000374342 MAP3K4Q9Y6R4 1608 aa24.15■■□□□ 1.46
PTPN20-203ENST00000374342 L3MBTL2Q969R5 705 aa24.14■■□□□ 1.45
PTPN20-203ENST00000374342 KIDINS220Q9ULH0 1771 aa24.14■■□□□ 1.45
PTPN20-203ENST00000374342 ZNF518AQ6AHZ1 1483 aa24.13■■□□□ 1.45
PTPN20-203ENST00000374342 DEPDC5O75140 1603 aa24.12■■□□□ 1.45
PTPN20-203ENST00000374342 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.12■■□□□ 1.45
PTPN20-203ENST00000374342 EIF2AK4Q9P2K8 1649 aaKnown RBP24.1■■□□□ 1.45
PTPN20-203ENST00000374342 KDM5CP41229 1560 aa24.1■■□□□ 1.45
PTPN20-203ENST00000374342 POGZQ7Z3K3 1410 aa24.09■■□□□ 1.45
PTPN20-203ENST00000374342 GLI2P10070 1586 aa24.08■■□□□ 1.45
PTPN20-203ENST00000374342 MYT1LQ9UL68 1186 aa24.07■■□□□ 1.44
PTPN20-203ENST00000374342 NEO1Q92859 1461 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms