RNA–Protein interactions for RNA: ENST00000373381.8

CSMD2-205, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSMD2, Length 13,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-205ENST00000373381 HDAC5Q9UQL6 1122 aa11.47□□□□□ -0.57
CSMD2-205ENST00000373381 FRAT1Q92837 279 aaPredicted RBP11.47□□□□□ -0.57
CSMD2-205ENST00000373381 GTF2E1P29083 439 aaPredicted RBP11.46□□□□□ -0.57
CSMD2-205ENST00000373381 SETQ01105 290 aaPredicted RBP11.46□□□□□ -0.57
CSMD2-205ENST00000373381 SRPK2P78362 688 aaKnown RBP11.45□□□□□ -0.58
CSMD2-205ENST00000373381 SYAP1Q96A49 352 aaPredicted RBP11.45□□□□□ -0.58
CSMD2-205ENST00000373381 CHMP3Q9Y3E7 222 aa11.45□□□□□ -0.58
CSMD2-205ENST00000373381 SOX12O15370 315 aa11.45□□□□□ -0.58
CSMD2-205ENST00000373381 PTMSP20962 102 aa11.44□□□□□ -0.58
CSMD2-205ENST00000373381 CREBRFQ8IUR6 639 aa11.44□□□□□ -0.58
CSMD2-205ENST00000373381 PAK3O75914 559 aaPredicted RBP11.44□□□□□ -0.58
CSMD2-205ENST00000373381 TSR1Q2NL82 804 aaKnown RBP11.44□□□□□ -0.58
CSMD2-205ENST00000373381 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.43□□□□□ -0.58
CSMD2-205ENST00000373381 RSF1Q96T23 1441 aaPredicted RBP11.43□□□□□ -0.58
CSMD2-205ENST00000373381 AMER1Q5JTC6 1135 aaPredicted RBP11.43□□□□□ -0.58
CSMD2-205ENST00000373381 CALD1Q05682 793 aaKnown RBP11.43□□□□□ -0.58
CSMD2-205ENST00000373381 TPM2P07951 284 aa11.43□□□□□ -0.58
CSMD2-205ENST00000373381 AEBP2Q6ZN18 517 aaPredicted RBP11.43□□□□□ -0.58
CSMD2-205ENST00000373381 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.43□□□□□ -0.58
CSMD2-205ENST00000373381 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.43□□□□□ -0.58
CSMD2-205ENST00000373381 CALRP27797 417 aaKnown RBP11.42□□□□□ -0.58
CSMD2-205ENST00000373381 ANO8Q9HCE9 1232 aaPredicted RBP11.42□□□□□ -0.58
CSMD2-205ENST00000373381 HSP90B1P14625 803 aaKnown RBP11.42□□□□□ -0.58
CSMD2-205ENST00000373381 NOL10Q9BSC4 688 aaKnown RBP11.42□□□□□ -0.58
CSMD2-205ENST00000373381 CSPP1Q1MSJ5 1256 aa11.42□□□□□ -0.58
CSMD2-205ENST00000373381 AMOTL1Q8IY63 956 aa11.41□□□□□ -0.58
CSMD2-205ENST00000373381 RRP12Q5JTH9 1297 aaKnown RBP11.41□□□□□ -0.58
CSMD2-205ENST00000373381 WWC1Q8IX03 1113 aa11.41□□□□□ -0.58
CSMD2-205ENST00000373381 RGS3P49796 1198 aa11.4□□□□□ -0.58
CSMD2-205ENST00000373381 CCDC70Q6NSX1 233 aa11.4□□□□□ -0.58
CSMD2-205ENST00000373381 IRX6P78412 446 aaPredicted RBP11.4□□□□□ -0.58
CSMD2-205ENST00000373381 KIF3AQ9Y496 699 aa11.4□□□□□ -0.58
CSMD2-205ENST00000373381 IPO8O15397 1037 aaKnown RBP11.4□□□□□ -0.59
CSMD2-205ENST00000373381 RRP7BPQ9NSQ0 103 aa11.39□□□□□ -0.59
CSMD2-205ENST00000373381 SPAG9O60271 1321 aaKnown RBP11.39□□□□□ -0.59
CSMD2-205ENST00000373381 CARD11Q9BXL7 1154 aa11.39□□□□□ -0.59
CSMD2-205ENST00000373381 PES1O00541 588 aaKnown RBP11.39□□□□□ -0.59
CSMD2-205ENST00000373381 MEX3CQ5U5Q3 659 aaKnown RBP11.39□□□□□ -0.59
CSMD2-205ENST00000373381 PPP4R2Q9NY27 417 aa11.39□□□□□ -0.59
CSMD2-205ENST00000373381 TOMM22Q9NS69 142 aa11.38□□□□□ -0.59
CSMD2-205ENST00000373381 FOXD1Q16676 465 aa11.38□□□□□ -0.59
CSMD2-205ENST00000373381 MSH5O43196 834 aa11.38□□□□□ -0.59
CSMD2-205ENST00000373381 R3HCC1Q9Y3T6 440 aaKnown RBP11.37□□□□□ -0.59
CSMD2-205ENST00000373381 AKAP17AQ02040 695 aaKnown RBP11.37□□□□□ -0.59
CSMD2-205ENST00000373381 TPD52L1Q16890 204 aaPredicted RBP11.37□□□□□ -0.59
CSMD2-205ENST00000373381 MLECQ14165 292 aa11.37□□□□□ -0.59
CSMD2-205ENST00000373381 HDGFL2Q7Z4V5 671 aaPredicted RBP11.36□□□□□ -0.59
CSMD2-205ENST00000373381 GBP4Q96PP9 640 aa11.36□□□□□ -0.59
CSMD2-205ENST00000373381 CCDC43Q96MW1 224 aaKnown RBP11.36□□□□□ -0.59
CSMD2-205ENST00000373381 ERCC6Q03468 1493 aa11.35□□□□□ -0.59
CSMD2-205ENST00000373381 TPM1P09493 284 aa11.35□□□□□ -0.59
CSMD2-205ENST00000373381 CFDP1Q9UEE9 299 aaPredicted RBP11.35□□□□□ -0.59
CSMD2-205ENST00000373381 PHF14O94880 888 aa11.35□□□□□ -0.59
CSMD2-205ENST00000373381 STK31Q9BXU1 1019 aa11.35□□□□□ -0.59
CSMD2-205ENST00000373381 PAF1Q8N7H5 531 aa11.34□□□□□ -0.59
CSMD2-205ENST00000373381 PHF23Q9BUL5 403 aaPredicted RBP11.34□□□□□ -0.59
CSMD2-205ENST00000373381 WWC2Q6AWC2 1192 aa11.34□□□□□ -0.59
CSMD2-205ENST00000373381 CHMP4CQ96CF2 233 aa11.34□□□□□ -0.59
CSMD2-205ENST00000373381 RDXP35241 583 aaKnown RBP11.34□□□□□ -0.59
CSMD2-205ENST00000373381 CCAR1Q8IX12 1150 aaKnown RBP11.33□□□□□ -0.6
CSMD2-205ENST00000373381 ODF2Q5BJF6 829 aa11.32□□□□□ -0.6
CSMD2-205ENST00000373381 RAD21O60216 631 aa11.32□□□□□ -0.6
CSMD2-205ENST00000373381 KLHL34Q8N239 644 aa11.32□□□□□ -0.6
CSMD2-205ENST00000373381 WASHC2AQ641Q2 1341 aa11.31□□□□□ -0.6
CSMD2-205ENST00000373381 HMMRO75330 724 aa11.31□□□□□ -0.6
CSMD2-205ENST00000373381 IPO7O95373 1038 aaKnown RBP11.31□□□□□ -0.6
CSMD2-205ENST00000373381 TMF1P82094 1093 aa11.31□□□□□ -0.6
CSMD2-205ENST00000373381 LRRFIP1Q32MZ4 808 aaKnown RBP11.3□□□□□ -0.6
CSMD2-205ENST00000373381 MORC1Q86VD1 984 aa11.3□□□□□ -0.6
CSMD2-205ENST00000373381 SF3A1Q15459 793 aaKnown RBP11.3□□□□□ -0.6
CSMD2-205ENST00000373381 PATL2C9JE40 543 aaKnown RBP11.3□□□□□ -0.6
CSMD2-205ENST00000373381 KIF16BQ96L93 1317 aa11.3□□□□□ -0.6
CSMD2-205ENST00000373381 CC2D1BQ5T0F9 858 aaKnown RBP11.29□□□□□ -0.6
CSMD2-205ENST00000373381 EID1Q9Y6B2 187 aa11.29□□□□□ -0.6
CSMD2-205ENST00000373381 APBB1O00213 710 aa11.29□□□□□ -0.6
CSMD2-205ENST00000373381 CCDC47Q96A33 483 aaKnown RBP11.29□□□□□ -0.6
CSMD2-205ENST00000373381 TRIM6-TRIM34B2RNG4 842 aa11.29□□□□□ -0.6
CSMD2-205ENST00000373381 CT47A1Q5JQC4 288 aaPredicted RBP11.29□□□□□ -0.6
CSMD2-205ENST00000373381 SYNE3Q6ZMZ3 975 aa11.28□□□□□ -0.6
CSMD2-205ENST00000373381 VPS37DQ86XT2 251 aa11.28□□□□□ -0.6
CSMD2-205ENST00000373381 ANKRD20A12PQ8NF67 263 aa11.28□□□□□ -0.6
CSMD2-205ENST00000373381 GPS2Q13227 327 aa11.27□□□□□ -0.61
CSMD2-205ENST00000373381 EVA1CP58658 441 aa11.27□□□□□ -0.61
CSMD2-205ENST00000373381 H3BQV1 296 aa11.26□□□□□ -0.61
CSMD2-205ENST00000373381 IFFO2Q5TF58 517 aa11.26□□□□□ -0.61
CSMD2-205ENST00000373381 CDR1P51861 262 aa11.25□□□□□ -0.61
CSMD2-205ENST00000373381 DHX16O60231 1041 aaKnown RBP11.25□□□□□ -0.61
CSMD2-205ENST00000373381 SAFB2Q14151 953 aaKnown RBP eCLIP11.25□□□□□ -0.61
CSMD2-205ENST00000373381 ZRSR2Q15696 482 aaKnown RBP11.25□□□□□ -0.61
CSMD2-205ENST00000373381 SPRYD3Q8NCJ5 442 aa11.25□□□□□ -0.61
CSMD2-205ENST00000373381 HIRIP3Q9BW71 556 aaPredicted RBP11.24□□□□□ -0.61
CSMD2-205ENST00000373381 FBXW7Q969H0 707 aa11.23□□□□□ -0.61
CSMD2-205ENST00000373381 STK26Q9P289 416 aa11.23□□□□□ -0.61
CSMD2-205ENST00000373381 HOOK1Q9UJC3 728 aaKnown RBP11.23□□□□□ -0.61
CSMD2-205ENST00000373381 TMEM132AQ24JP5 1023 aa11.22□□□□□ -0.61
CSMD2-205ENST00000373381 CCAR2Q8N163 923 aaKnown RBP11.22□□□□□ -0.61
CSMD2-205ENST00000373381 SMC4Q9NTJ3 1288 aa11.22□□□□□ -0.61
CSMD2-205ENST00000373381 CLIP1P30622 1438 aa11.22□□□□□ -0.61
CSMD2-205ENST00000373381 LMOD3Q0VAK6 560 aa11.22□□□□□ -0.61
CSMD2-205ENST00000373381 ITPRIPQ8IWB1 547 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms