RNA–Protein interactions for RNA: ENST00000373193.7

PTPRT-205, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-205ENST00000373193 LMOD2Q6P5Q4 547 aa11.65□□□□□ -0.54
PTPRT-205ENST00000373193 ZNF592Q92610 1267 aa11.64□□□□□ -0.55
PTPRT-205ENST00000373193 CCDC180Q9P1Z9 1646 aa11.64□□□□□ -0.55
PTPRT-205ENST00000373193 FAM13BQ9NYF5 915 aa11.64□□□□□ -0.55
PTPRT-205ENST00000373193 TSHZ2Q9NRE2 1034 aa11.63□□□□□ -0.55
PTPRT-205ENST00000373193 APPP05067 770 aa11.63□□□□□ -0.55
PTPRT-205ENST00000373193 CHMP4BQ9H444 224 aaKnown RBP11.62□□□□□ -0.55
PTPRT-205ENST00000373193 TPM3P06753 285 aa11.62□□□□□ -0.55
PTPRT-205ENST00000373193 CALD1Q05682 793 aaKnown RBP11.61□□□□□ -0.55
PTPRT-205ENST00000373193 SOX12O15370 315 aa11.61□□□□□ -0.55
PTPRT-205ENST00000373193 MS4A1P11836 297 aa11.61□□□□□ -0.55
PTPRT-205ENST00000373193 IPO9Q96P70 1041 aaKnown RBP11.61□□□□□ -0.55
PTPRT-205ENST00000373193 CARD11Q9BXL7 1154 aa11.61□□□□□ -0.55
PTPRT-205ENST00000373193 FOXD4L6Q3SYB3 417 aaPredicted RBP11.61□□□□□ -0.55
PTPRT-205ENST00000373193 FOXD4L3Q6VB84 417 aaPredicted RBP11.61□□□□□ -0.55
PTPRT-205ENST00000373193 PES1O00541 588 aaKnown RBP11.6□□□□□ -0.55
PTPRT-205ENST00000373193 TSPY4P0CV99 314 aa11.6□□□□□ -0.55
PTPRT-205ENST00000373193 TSPY10P0CW01 314 aa11.6□□□□□ -0.55
PTPRT-205ENST00000373193 RASSF8Q8NHQ8 419 aa11.6□□□□□ -0.55
PTPRT-205ENST00000373193 WWC1Q8IX03 1113 aa11.6□□□□□ -0.55
PTPRT-205ENST00000373193 MTUS2Q5JR59 1369 aa11.6□□□□□ -0.55
PTPRT-205ENST00000373193 ITPRIPQ8IWB1 547 aa11.59□□□□□ -0.55
PTPRT-205ENST00000373193 NUDCQ9Y266 331 aa11.59□□□□□ -0.55
PTPRT-205ENST00000373193 RRP12Q5JTH9 1297 aaKnown RBP11.58□□□□□ -0.56
PTPRT-205ENST00000373193 SLC4A3P48751 1232 aa11.58□□□□□ -0.56
PTPRT-205ENST00000373193 HTATSF1O43719 755 aaKnown RBP11.57□□□□□ -0.56
PTPRT-205ENST00000373193 USP35Q9P2H5 1018 aa11.57□□□□□ -0.56
PTPRT-205ENST00000373193 PKNOX2Q96KN3 472 aa11.56□□□□□ -0.56
PTPRT-205ENST00000373193 TRIM6-TRIM34B2RNG4 842 aa11.56□□□□□ -0.56
PTPRT-205ENST00000373193 PHF14O94880 888 aa11.56□□□□□ -0.56
PTPRT-205ENST00000373193 CEP89Q96ST8 783 aa11.55□□□□□ -0.56
PTPRT-205ENST00000373193 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.55□□□□□ -0.56
PTPRT-205ENST00000373193 SIN3AQ96ST3 1273 aa11.55□□□□□ -0.56
PTPRT-205ENST00000373193 CDCA8Q53HL2 280 aa11.55□□□□□ -0.56
PTPRT-205ENST00000373193 NPM1P06748 294 aaKnown RBP eCLIP11.54□□□□□ -0.56
PTPRT-205ENST00000373193 MAPK8IP2Q13387 824 aaPredicted RBP11.54□□□□□ -0.56
PTPRT-205ENST00000373193 PODXL2Q9NZ53 605 aa11.53□□□□□ -0.56
PTPRT-205ENST00000373193 POGKQ9P215 609 aa11.53□□□□□ -0.56
PTPRT-205ENST00000373193 VPS53Q5VIR6 699 aa11.53□□□□□ -0.56
PTPRT-205ENST00000373193 TEX35Q5T0J7 233 aa11.52□□□□□ -0.56
PTPRT-205ENST00000373193 GPS2Q13227 327 aa11.52□□□□□ -0.56
PTPRT-205ENST00000373193 TPD52L1Q16890 204 aaPredicted RBP11.52□□□□□ -0.56
PTPRT-205ENST00000373193 PLCD4Q9BRC7 762 aa11.52□□□□□ -0.57
PTPRT-205ENST00000373193 TCERG1O14776 1098 aaKnown RBP11.52□□□□□ -0.57
PTPRT-205ENST00000373193 FBXW7Q969H0 707 aa11.51□□□□□ -0.57
PTPRT-205ENST00000373193 RCAN3Q9UKA8 241 aa11.51□□□□□ -0.57
PTPRT-205ENST00000373193 CSPP1Q1MSJ5 1256 aa11.51□□□□□ -0.57
PTPRT-205ENST00000373193 ZNF330Q9Y3S2 320 aaPredicted RBP11.51□□□□□ -0.57
PTPRT-205ENST00000373193 DDX11L8A8MPP1 907 aa11.5□□□□□ -0.57
PTPRT-205ENST00000373193 GSE1Q14687 1217 aa11.5□□□□□ -0.57
PTPRT-205ENST00000373193 MAP7D2Q96T17 732 aa11.5□□□□□ -0.57
PTPRT-205ENST00000373193 RWDD1Q9H446 243 aaPredicted RBP11.5□□□□□ -0.57
PTPRT-205ENST00000373193 KCNH8Q96L42 1107 aa11.49□□□□□ -0.57
PTPRT-205ENST00000373193 CHMP3Q9Y3E7 222 aa11.49□□□□□ -0.57
PTPRT-205ENST00000373193 CCDC70Q6NSX1 233 aa11.49□□□□□ -0.57
PTPRT-205ENST00000373193 SF3A1Q15459 793 aaKnown RBP11.49□□□□□ -0.57
PTPRT-205ENST00000373193 DHX37Q8IY37 1157 aaKnown RBP11.49□□□□□ -0.57
PTPRT-205ENST00000373193 NOM1Q5C9Z4 860 aaKnown RBP11.48□□□□□ -0.57
PTPRT-205ENST00000373193 TSR1Q2NL82 804 aaKnown RBP11.48□□□□□ -0.57
PTPRT-205ENST00000373193 GOLGA6L19H0YKK7 550 aa11.48□□□□□ -0.57
PTPRT-205ENST00000373193 CFAP44Q96MT7 982 aa11.48□□□□□ -0.57
PTPRT-205ENST00000373193 CCDC34Q96HJ3 373 aa11.47□□□□□ -0.57
PTPRT-205ENST00000373193 CCDC9Q9Y3X0 531 aaKnown RBP11.47□□□□□ -0.57
PTPRT-205ENST00000373193 CLIP1P30622 1438 aa11.47□□□□□ -0.57
PTPRT-205ENST00000373193 SAFB2Q14151 953 aaKnown RBP eCLIP11.47□□□□□ -0.57
PTPRT-205ENST00000373193 KIF16BQ96L93 1317 aa11.47□□□□□ -0.57
PTPRT-205ENST00000373193 DDX49Q9Y6V7 483 aaKnown RBP11.47□□□□□ -0.57
PTPRT-205ENST00000373193 MYO15BQ96JP2 1530 aa11.46□□□□□ -0.57
PTPRT-205ENST00000373193 MORC1Q86VD1 984 aa11.46□□□□□ -0.57
PTPRT-205ENST00000373193 HOMER1Q86YM7 354 aa11.46□□□□□ -0.58
PTPRT-205ENST00000373193 H3BQV1 296 aa11.46□□□□□ -0.58
PTPRT-205ENST00000373193 HSP90AB3PQ58FF7 597 aa11.46□□□□□ -0.58
PTPRT-205ENST00000373193 IFFO2Q5TF58 517 aa11.46□□□□□ -0.58
PTPRT-205ENST00000373193 GORABQ5T7V8 394 aa11.45□□□□□ -0.58
PTPRT-205ENST00000373193 PCMTD1Q96MG8 357 aaPredicted RBP11.45□□□□□ -0.58
PTPRT-205ENST00000373193 GPATCH3Q96I76 525 aa11.45□□□□□ -0.58
PTPRT-205ENST00000373193 IPO8O15397 1037 aaKnown RBP11.45□□□□□ -0.58
PTPRT-205ENST00000373193 RTF1Q92541 710 aaKnown RBP11.45□□□□□ -0.58
PTPRT-205ENST00000373193 BECN2A8MW95 431 aa11.45□□□□□ -0.58
PTPRT-205ENST00000373193 ABCC9O60706 1549 aa11.45□□□□□ -0.58
PTPRT-205ENST00000373193 TOMM22Q9NS69 142 aa11.44□□□□□ -0.58
PTPRT-205ENST00000373193 ZCCHC6Q5VYS8 1495 aaKnown RBP11.44□□□□□ -0.58
PTPRT-205ENST00000373193 MARCH6O60337 910 aa11.44□□□□□ -0.58
PTPRT-205ENST00000373193 MCTP1Q6DN14 999 aa11.44□□□□□ -0.58
PTPRT-205ENST00000373193 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.43□□□□□ -0.58
PTPRT-205ENST00000373193 TPM1P09493 284 aa11.43□□□□□ -0.58
PTPRT-205ENST00000373193 ST18O60284 1047 aa11.43□□□□□ -0.58
PTPRT-205ENST00000373193 SKIDA1Q1XH10 827 aa11.43□□□□□ -0.58
PTPRT-205ENST00000373193 RUFY1Q96T51 708 aa11.43□□□□□ -0.58
PTPRT-205ENST00000373193 CLUAP1Q96AJ1 413 aa11.42□□□□□ -0.58
PTPRT-205ENST00000373193 AK7Q96M32 723 aa11.42□□□□□ -0.58
PTPRT-205ENST00000373193 R3HCC1Q9Y3T6 440 aaKnown RBP11.42□□□□□ -0.58
PTPRT-205ENST00000373193 H0YHG0 523 aa11.42□□□□□ -0.58
PTPRT-205ENST00000373193 FAM43AQ8N2R8 423 aa11.41□□□□□ -0.58
PTPRT-205ENST00000373193 RDXP35241 583 aaKnown RBP11.41□□□□□ -0.58
PTPRT-205ENST00000373193 SRPK2P78362 688 aaKnown RBP11.41□□□□□ -0.58
PTPRT-205ENST00000373193 IFT57Q9NWB7 429 aa11.4□□□□□ -0.58
PTPRT-205ENST00000373193 RBM10P98175 930 aaKnown RBP11.4□□□□□ -0.58
PTPRT-205ENST00000373193 PMFBP1Q8TBY8 1022 aa11.4□□□□□ -0.58
PTPRT-205ENST00000373193 SLC4A10Q6U841 1118 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms