RNA–Protein interactions for RNA: ENST00000372857.7

PABPC4-202, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 3,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-202ENST00000372857 NCOA1Q15788 1441 aa21.48■■□□□ 1.03
PABPC4-202ENST00000372857 IPO9Q96P70 1041 aaKnown RBP21.48■■□□□ 1.03
PABPC4-202ENST00000372857 DENND4BO75064 1496 aaPredicted RBP21.48■■□□□ 1.03
PABPC4-202ENST00000372857 RTL5Q5HYW3 569 aaPredicted RBP21.47■■□□□ 1.03
PABPC4-202ENST00000372857 ABCA5Q8WWZ7 1642 aa21.47■■□□□ 1.03
PABPC4-202ENST00000372857 ZNF608Q9ULD9 1512 aaPredicted RBP21.46■■□□□ 1.03
PABPC4-202ENST00000372857 ZNF644Q9H582 1327 aaPredicted RBP21.46■■□□□ 1.03
PABPC4-202ENST00000372857 ZBTB47Q9UFB7 747 aaPredicted RBP21.45■■□□□ 1.02
PABPC4-202ENST00000372857 CDK13Q14004 1512 aaKnown RBP21.45■■□□□ 1.02
PABPC4-202ENST00000372857 MAGI3Q5TCQ9 1506 aa21.45■■□□□ 1.02
PABPC4-202ENST00000372857 GRIN2BQ13224 1484 aa21.43■■□□□ 1.02
PABPC4-202ENST00000372857 LRRIQ1Q96JM4 1722 aa21.43■■□□□ 1.02
PABPC4-202ENST00000372857 KIF7Q2M1P5 1343 aa21.43■■□□□ 1.02
PABPC4-202ENST00000372857 NBPF8Q3BBV2 869 aa21.42■■□□□ 1.02
PABPC4-202ENST00000372857 MPHOSPH9Q99550 1183 aa21.42■■□□□ 1.02
PABPC4-202ENST00000372857 ZNF777Q9ULD5 760 aaPredicted RBP21.41■■□□□ 1.02
PABPC4-202ENST00000372857 KDM6BO15054 1643 aa21.41■■□□□ 1.02
PABPC4-202ENST00000372857 POLR3GLQ9BT43 218 aa21.4■■□□□ 1.02
PABPC4-202ENST00000372857 SMG6Q86US8 1419 aaKnown RBP21.4■■□□□ 1.02
PABPC4-202ENST00000372857 NUDCQ9Y266 331 aa21.39■■□□□ 1.02
PABPC4-202ENST00000372857 HECW1Q76N89 1606 aa21.37■■□□□ 1.01
PABPC4-202ENST00000372857 SAMD9Q5K651 1589 aa21.37■■□□□ 1.01
PABPC4-202ENST00000372857 NPM2Q86SE8 214 aaKnown RBP21.37■■□□□ 1.01
PABPC4-202ENST00000372857 SUPT6HQ7KZ85 1726 aaKnown RBP21.37■■□□□ 1.01
PABPC4-202ENST00000372857 IL27Q8NEV9 243 aa21.36■■□□□ 1.01
PABPC4-202ENST00000372857 TARBP1Q13395 1621 aaKnown RBP21.36■■□□□ 1.01
PABPC4-202ENST00000372857 RTN4Q9NQC3 1192 aaKnown RBP21.34■■□□□ 1.01
PABPC4-202ENST00000372857 SALL2Q9Y467 1007 aaPredicted RBP21.34■■□□□ 1.01
PABPC4-202ENST00000372857 RNF123Q5XPI4 1314 aa21.31■■□□□ 1
PABPC4-202ENST00000372857 CHMP7Q8WUX9 453 aaPredicted RBP21.31■■□□□ 1
PABPC4-202ENST00000372857 GCC2Q8IWJ2 1684 aa21.31■■□□□ 1
PABPC4-202ENST00000372857 EPRSP07814 1512 aaKnown RBP21.31■■□□□ 1
PABPC4-202ENST00000372857 EHBP1L1Q8N3D4 1523 aa21.3■■□□□ 1
PABPC4-202ENST00000372857 UGGT2Q9NYU1 1516 aa21.29■■□□□ 1
PABPC4-202ENST00000372857 LAS1LQ9Y4W2 734 aaKnown RBP21.29■■□□□ 1
PABPC4-202ENST00000372857 MRC2Q9UBG0 1479 aa21.28■■□□□ 1
PABPC4-202ENST00000372857 ZNF326Q5BKZ1 582 aaKnown RBP21.28■■□□□ 1
PABPC4-202ENST00000372857 IQGAP2Q13576 1575 aa21.27■■□□□ 1
PABPC4-202ENST00000372857 THOC2Q8NI27 1593 aaKnown RBP21.27■■□□□ 1
PABPC4-202ENST00000372857 SPATA31E1Q6ZUB1 1445 aa21.27■■□□□ 1
PABPC4-202ENST00000372857 DHX29Q7Z478 1369 aaKnown RBP21.25■□□□□ 0.99
PABPC4-202ENST00000372857 ANKRD30BQ9BXX2 1392 aa21.24■□□□□ 0.99
PABPC4-202ENST00000372857 RPRD2Q5VT52 1461 aaKnown RBP21.23■□□□□ 0.99
PABPC4-202ENST00000372857 TEX14Q8IWB6 1497 aa21.23■□□□□ 0.99
PABPC4-202ENST00000372857 NEFMP07197 916 aa21.22■□□□□ 0.99
PABPC4-202ENST00000372857 SLC4A1APQ9BWU0 796 aaKnown RBP21.22■□□□□ 0.99
PABPC4-202ENST00000372857 PBRM1Q86U86 1689 aa21.22■□□□□ 0.99
PABPC4-202ENST00000372857 ERCC6Q03468 1493 aa21.22■□□□□ 0.99
PABPC4-202ENST00000372857 TCOF1Q13428 1488 aaKnown RBP21.21■□□□□ 0.99
PABPC4-202ENST00000372857 ARHGEF11O15085 1522 aa21.21■□□□□ 0.99
PABPC4-202ENST00000372857 POLR1AO95602 1720 aaPredicted RBP21.2■□□□□ 0.98
PABPC4-202ENST00000372857 ADAMTS12P58397 1594 aa21.2■□□□□ 0.98
PABPC4-202ENST00000372857 TMC1Q8TDI8 760 aa21.2■□□□□ 0.98
PABPC4-202ENST00000372857 EXOC6Q8TAG9 804 aa21.19■□□□□ 0.98
PABPC4-202ENST00000372857 PRG4Q92954 1404 aaPredicted RBP21.19■□□□□ 0.98
PABPC4-202ENST00000372857 PNISRQ8TF01 805 aaKnown RBP21.18■□□□□ 0.98
PABPC4-202ENST00000372857 CFDP1Q9UEE9 299 aaPredicted RBP21.18■□□□□ 0.98
PABPC4-202ENST00000372857 PDE4AP27815 886 aa21.15■□□□□ 0.98
PABPC4-202ENST00000372857 PLB1Q6P1J6 1458 aa21.14■□□□□ 0.97
PABPC4-202ENST00000372857 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.14■□□□□ 0.97
PABPC4-202ENST00000372857 RRP1P56182 461 aaKnown RBP21.13■□□□□ 0.97
PABPC4-202ENST00000372857 USP47Q96K76 1375 aa21.13■□□□□ 0.97
PABPC4-202ENST00000372857 BCORL1Q5H9F3 1711 aa21.13■□□□□ 0.97
PABPC4-202ENST00000372857 WDR62O43379 1518 aa21.13■□□□□ 0.97
PABPC4-202ENST00000372857 DISP1Q96F81 1524 aa21.12■□□□□ 0.97
PABPC4-202ENST00000372857 TCERG1O14776 1098 aaKnown RBP21.12■□□□□ 0.97
PABPC4-202ENST00000372857 NUP153P49790 1475 aaKnown RBP21.11■□□□□ 0.97
PABPC4-202ENST00000372857 JPH4Q96JJ6 628 aa21.1■□□□□ 0.97
PABPC4-202ENST00000372857 IFT140Q96RY7 1462 aa21.1■□□□□ 0.97
PABPC4-202ENST00000372857 MIA2Q96PC5 1412 aa21.1■□□□□ 0.97
PABPC4-202ENST00000372857 ABCC5O15440 1437 aa21.09■□□□□ 0.97
PABPC4-202ENST00000372857 BACH2Q9BYV9 841 aa21.08■□□□□ 0.97
PABPC4-202ENST00000372857 DAPK1P53355 1430 aa21.08■□□□□ 0.97
PABPC4-202ENST00000372857 SKAP1Q86WV1 359 aa21.08■□□□□ 0.96
PABPC4-202ENST00000372857 GRIN2AQ12879 1464 aa21.07■□□□□ 0.96
PABPC4-202ENST00000372857 KIAA0586Q9BVV6 1533 aa21.07■□□□□ 0.96
PABPC4-202ENST00000372857 RCAN3Q9UKA8 241 aa21.07■□□□□ 0.96
PABPC4-202ENST00000372857 USP35Q9P2H5 1018 aa21.05■□□□□ 0.96
PABPC4-202ENST00000372857 EIF4G3O43432 1585 aaKnown RBP21.02■□□□□ 0.96
PABPC4-202ENST00000372857 KIAA0556O60303 1618 aa21.02■□□□□ 0.96
PABPC4-202ENST00000372857 KDM2AQ9Y2K7 1162 aa21.02■□□□□ 0.96
PABPC4-202ENST00000372857 PKD2Q13563 968 aa21.02■□□□□ 0.95
PABPC4-202ENST00000372857 PPM1GO15355 546 aaPredicted RBP21.01■□□□□ 0.95
PABPC4-202ENST00000372857 BRPF3Q9ULD4 1205 aa21.01■□□□□ 0.95
PABPC4-202ENST00000372857 LRPPRCP42704 1394 aaKnown RBP21■□□□□ 0.95
PABPC4-202ENST00000372857 PLIN1O60240 522 aa21■□□□□ 0.95
PABPC4-202ENST00000372857 ROCK1Q13464 1354 aa21■□□□□ 0.95
PABPC4-202ENST00000372857 WASHC2CQ9Y4E1 1318 aa20.99■□□□□ 0.95
PABPC4-202ENST00000372857 HNRNPMP52272 730 aaKnown RBP eCLIP20.99■□□□□ 0.951e-6■■■■□ 26
PABPC4-202ENST00000372857 KIF15Q9NS87 1388 aa20.98■□□□□ 0.95
PABPC4-202ENST00000372857 PLEKHD1A6NEE1 506 aa20.98■□□□□ 0.95
PABPC4-202ENST00000372857 MS4A1P11836 297 aa20.98■□□□□ 0.95
PABPC4-202ENST00000372857 CDCA7LQ96GN5 454 aa20.97■□□□□ 0.95
PABPC4-202ENST00000372857 MYBBP1AQ9BQG0 1328 aaKnown RBP20.97■□□□□ 0.95
PABPC4-202ENST00000372857 SLC4A3P48751 1232 aa20.96■□□□□ 0.95
PABPC4-202ENST00000372857 MBD5Q9P267 1494 aa20.96■□□□□ 0.95
PABPC4-202ENST00000372857 KDM5CP41229 1560 aa20.96■□□□□ 0.95
PABPC4-202ENST00000372857 CARD11Q9BXL7 1154 aa20.96■□□□□ 0.95
PABPC4-202ENST00000372857 PZPP20742 1482 aa20.96■□□□□ 0.95
PABPC4-202ENST00000372857 BRD4O60885 1362 aaPredicted RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms