RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 RPRD2Q5VT52 1461 aaKnown RBP17.83■□□□□ 0.44
CTPS1-202ENST00000372621 L3MBTL2Q969R5 705 aa17.82■□□□□ 0.44
CTPS1-202ENST00000372621 EIF4G2P78344 907 aaKnown RBP eCLIP17.81■□□□□ 0.44
CTPS1-202ENST00000372621 TEX14Q8IWB6 1497 aa17.81■□□□□ 0.44
CTPS1-202ENST00000372621 ARID3CA6NKF2 412 aa17.81■□□□□ 0.44
CTPS1-202ENST00000372621 GRIN2AQ12879 1464 aa17.8■□□□□ 0.44
CTPS1-202ENST00000372621 NEFLP07196 543 aa17.8■□□□□ 0.44
CTPS1-202ENST00000372621 NCOA1Q15788 1441 aa17.79■□□□□ 0.44
CTPS1-202ENST00000372621 CNTLNQ9NXG0 1405 aa17.79■□□□□ 0.44
CTPS1-202ENST00000372621 EIF4G3O43432 1585 aaKnown RBP17.78■□□□□ 0.44
CTPS1-202ENST00000372621 FOXD1Q16676 465 aa17.78■□□□□ 0.44
CTPS1-202ENST00000372621 POLR1AO95602 1720 aaPredicted RBP17.78■□□□□ 0.44
CTPS1-202ENST00000372621 ZNF644Q9H582 1327 aaPredicted RBP17.77■□□□□ 0.44
CTPS1-202ENST00000372621 C11orf95C9JLR9 678 aaPredicted RBP17.75■□□□□ 0.43
CTPS1-202ENST00000372621 SPATA31E1Q6ZUB1 1445 aa17.74■□□□□ 0.43
CTPS1-202ENST00000372621 CCDC7Q96M83 1385 aa17.74■□□□□ 0.43
CTPS1-202ENST00000372621 ADCY10Q96PN6 1610 aa17.74■□□□□ 0.43
CTPS1-202ENST00000372621 ADGBQ8N7X0 1667 aa17.74■□□□□ 0.43
CTPS1-202ENST00000372621 ITSN2Q9NZM3 1697 aa17.74■□□□□ 0.43
CTPS1-202ENST00000372621 NBPF8Q3BBV2 869 aa17.74■□□□□ 0.43
CTPS1-202ENST00000372621 TROQ12816 1431 aaPredicted RBP17.73■□□□□ 0.43
CTPS1-202ENST00000372621 PZPP20742 1482 aa17.73■□□□□ 0.43
CTPS1-202ENST00000372621 CAMSAP2Q08AD1 1489 aa17.72■□□□□ 0.43
CTPS1-202ENST00000372621 HNRNPUQ00839 825 aaKnown RBP eCLIP17.72■□□□□ 0.43
CTPS1-202ENST00000372621 CDK11AQ9UQ88 783 aaPredicted RBP17.72■□□□□ 0.43
CTPS1-202ENST00000372621 CROCC2H7BZ55 1655 aa17.72■□□□□ 0.43
CTPS1-202ENST00000372621 PRG4Q92954 1404 aaPredicted RBP17.71■□□□□ 0.43
CTPS1-202ENST00000372621 CEP170Q5SW79 1584 aa17.71■□□□□ 0.43
CTPS1-202ENST00000372621 ADGRL2O95490 1459 aa17.7■□□□□ 0.42
CTPS1-202ENST00000372621 MAGI1Q96QZ7 1491 aaPredicted RBP17.7■□□□□ 0.42
CTPS1-202ENST00000372621 GPATCH8Q9UKJ3 1502 aaKnown RBP17.69■□□□□ 0.42
CTPS1-202ENST00000372621 SLC4A1APQ9BWU0 796 aaKnown RBP17.69■□□□□ 0.42
CTPS1-202ENST00000372621 KIF14Q15058 1648 aa17.69■□□□□ 0.42
CTPS1-202ENST00000372621 PRKRIP1Q9H875 184 aaPredicted RBP17.68■□□□□ 0.42
CTPS1-202ENST00000372621 MBD5Q9P267 1494 aa17.68■□□□□ 0.42
CTPS1-202ENST00000372621 CCDC184Q52MB2 194 aa17.68■□□□□ 0.42
CTPS1-202ENST00000372621 PLB1Q6P1J6 1458 aa17.67■□□□□ 0.42
CTPS1-202ENST00000372621 SYNJ2O15056 1496 aa17.65■□□□□ 0.42
CTPS1-202ENST00000372621 KIF7Q2M1P5 1343 aa17.64■□□□□ 0.41
CTPS1-202ENST00000372621 CFDP1Q9UEE9 299 aaPredicted RBP17.64■□□□□ 0.41
CTPS1-202ENST00000372621 KIAA1107Q9UPP5 1409 aa17.63■□□□□ 0.41
CTPS1-202ENST00000372621 RBM19Q9Y4C8 960 aaKnown RBP17.62■□□□□ 0.41
CTPS1-202ENST00000372621 ANP32EQ9BTT0 268 aa17.61■□□□□ 0.41
CTPS1-202ENST00000372621 NUP160Q12769 1436 aa17.61■□□□□ 0.41
CTPS1-202ENST00000372621 CDC42BPAQ5VT25 1732 aa17.6■□□□□ 0.41
CTPS1-202ENST00000372621 BCORL1Q5H9F3 1711 aa17.59■□□□□ 0.41
CTPS1-202ENST00000372621 CARMIL2Q6F5E8 1435 aa17.58■□□□□ 0.4
CTPS1-202ENST00000372621 ABCA8O94911 1581 aa17.58■□□□□ 0.4
CTPS1-202ENST00000372621 ERICH6BQ5W0A0 696 aa17.57■□□□□ 0.4
CTPS1-202ENST00000372621 CHMP7Q8WUX9 453 aaPredicted RBP17.57■□□□□ 0.4
CTPS1-202ENST00000372621 ANKRD30AQ9BXX3 1397 aa17.57■□□□□ 0.4
CTPS1-202ENST00000372621 ABCC10Q5T3U5 1492 aa17.57■□□□□ 0.4
CTPS1-202ENST00000372621 SHANK2Q9UPX8 1470 aa17.57■□□□□ 0.4
CTPS1-202ENST00000372621 ZBED9Q6R2W3 1325 aa17.56■□□□□ 0.4
CTPS1-202ENST00000372621 KDM5CP41229 1560 aa17.56■□□□□ 0.4
CTPS1-202ENST00000372621 MRS2Q9HD23 443 aa17.56■□□□□ 0.4
CTPS1-202ENST00000372621 DHX29Q7Z478 1369 aaKnown RBP17.55■□□□□ 0.4
CTPS1-202ENST00000372621 ANKRD50Q9ULJ7 1429 aa17.55■□□□□ 0.4
CTPS1-202ENST00000372621 JPH4Q96JJ6 628 aa17.54■□□□□ 0.4
CTPS1-202ENST00000372621 KDM5DQ9BY66 1539 aa17.54■□□□□ 0.4
CTPS1-202ENST00000372621 UHRF1BP1Q6BDS2 1440 aa17.53■□□□□ 0.4
CTPS1-202ENST00000372621 FAM9BQ8IZU0 186 aa17.53■□□□□ 0.4
CTPS1-202ENST00000372621 PKD2Q13563 968 aa17.53■□□□□ 0.4
CTPS1-202ENST00000372621 ERCC6Q03468 1493 aa17.53■□□□□ 0.4
CTPS1-202ENST00000372621 IRX6P78412 446 aaPredicted RBP17.53■□□□□ 0.4
CTPS1-202ENST00000372621 ZNF777Q9ULD5 760 aaPredicted RBP17.53■□□□□ 0.4
CTPS1-202ENST00000372621 USP47Q96K76 1375 aa17.52■□□□□ 0.4
CTPS1-202ENST00000372621 ATP10BO94823 1461 aa17.51■□□□□ 0.39
CTPS1-202ENST00000372621 ARID4BQ4LE39 1312 aaPredicted RBP17.5■□□□□ 0.39
CTPS1-202ENST00000372621 C9orf84Q5VXU9 1444 aa17.5■□□□□ 0.39
CTPS1-202ENST00000372621 RALGAPBQ86X10 1494 aa17.5■□□□□ 0.39
CTPS1-202ENST00000372621 ARHGEF12Q9NZN5 1544 aa17.5■□□□□ 0.39
CTPS1-202ENST00000372621 ARHGEF5Q12774 1597 aa17.47■□□□□ 0.39
CTPS1-202ENST00000372621 PTPRGP23470 1445 aa17.47■□□□□ 0.39
CTPS1-202ENST00000372621 PLEKHD1A6NEE1 506 aa17.47■□□□□ 0.39
CTPS1-202ENST00000372621 PPP4R2Q9NY27 417 aa17.47■□□□□ 0.39
CTPS1-202ENST00000372621 FBLN2P98095 1184 aa17.46■□□□□ 0.39
CTPS1-202ENST00000372621 NUP155O75694 1391 aa17.45■□□□□ 0.38
CTPS1-202ENST00000372621 SMG6Q86US8 1419 aaKnown RBP17.42■□□□□ 0.38
CTPS1-202ENST00000372621 ROCK2O75116 1388 aaKnown RBP17.42■□□□□ 0.38
CTPS1-202ENST00000372621 ZNF326Q5BKZ1 582 aaKnown RBP17.41■□□□□ 0.38
CTPS1-202ENST00000372621 CDC42BPBQ9Y5S2 1711 aa17.41■□□□□ 0.38
CTPS1-202ENST00000372621 FANCIQ9NVI1 1328 aa17.4■□□□□ 0.38
CTPS1-202ENST00000372621 KIF15Q9NS87 1388 aa17.4■□□□□ 0.38
CTPS1-202ENST00000372621 SAMD9LQ8IVG5 1584 aa17.39■□□□□ 0.38
CTPS1-202ENST00000372621 PREX2Q70Z35 1606 aa17.39■□□□□ 0.37
CTPS1-202ENST00000372621 E9PCH4 1651 aa17.39■□□□□ 0.37
CTPS1-202ENST00000372621 MSH5O43196 834 aa17.39■□□□□ 0.37
CTPS1-202ENST00000372621 TSPY4P0CV99 314 aa17.38■□□□□ 0.37
CTPS1-202ENST00000372621 TSPY10P0CW01 314 aa17.38■□□□□ 0.37
CTPS1-202ENST00000372621 CCDC141Q6ZP82 1450 aa17.36■□□□□ 0.37
CTPS1-202ENST00000372621 CARD11Q9BXL7 1154 aa17.36■□□□□ 0.37
CTPS1-202ENST00000372621 RNF123Q5XPI4 1314 aa17.36■□□□□ 0.37
CTPS1-202ENST00000372621 FAM135AQ9P2D6 1515 aa17.36■□□□□ 0.37
CTPS1-202ENST00000372621 HNRNPMP52272 730 aaKnown RBP eCLIP17.36■□□□□ 0.371e-8■■■■■ 50.4
CTPS1-202ENST00000372621 PNISRQ8TF01 805 aaKnown RBP17.35■□□□□ 0.37
CTPS1-202ENST00000372621 TRPM1Q7Z4N2 1603 aa17.33■□□□□ 0.36
CTPS1-202ENST00000372621 NUDCQ9Y266 331 aa17.33■□□□□ 0.36
CTPS1-202ENST00000372621 B4GALNT3Q6L9W6 998 aa17.32■□□□□ 0.36
CTPS1-202ENST00000372621 POLR3GLQ9BT43 218 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms