RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 CCDC136Q96JN2 1154 aa24.94■■□□□ 1.58
MMP9-201ENST00000372330 UACAQ9BZF9 1416 aa24.94■■□□□ 1.58
MMP9-201ENST00000372330 B4GALNT3Q6L9W6 998 aa24.94■■□□□ 1.58
MMP9-201ENST00000372330 WASHC2AQ641Q2 1341 aa24.93■■□□□ 1.58
MMP9-201ENST00000372330 GRIN2AQ12879 1464 aa24.93■■□□□ 1.58
MMP9-201ENST00000372330 NAIPQ13075 1403 aa24.92■■□□□ 1.58
MMP9-201ENST00000372330 USP35Q9P2H5 1018 aa24.92■■□□□ 1.58
MMP9-201ENST00000372330 EPRSP07814 1512 aaKnown RBP24.91■■□□□ 1.58
MMP9-201ENST00000372330 HIRIP3Q9BW71 556 aaPredicted RBP24.9■■□□□ 1.58
MMP9-201ENST00000372330 C11orf95C9JLR9 678 aaPredicted RBP24.9■■□□□ 1.58
MMP9-201ENST00000372330 KIAA0586Q9BVV6 1533 aa24.89■■□□□ 1.57
MMP9-201ENST00000372330 MAGI1Q96QZ7 1491 aaPredicted RBP24.89■■□□□ 1.57
MMP9-201ENST00000372330 ARID3CA6NKF2 412 aa24.87■■□□□ 1.57
MMP9-201ENST00000372330 CDK13Q14004 1512 aaKnown RBP24.87■■□□□ 1.57
MMP9-201ENST00000372330 TCOF1Q13428 1488 aaKnown RBP24.87■■□□□ 1.57
MMP9-201ENST00000372330 CHMP7Q8WUX9 453 aaPredicted RBP24.85■■□□□ 1.57
MMP9-201ENST00000372330 SYNJ2O15056 1496 aa24.83■■□□□ 1.57
MMP9-201ENST00000372330 FBLN2P98095 1184 aa24.83■■□□□ 1.56
MMP9-201ENST00000372330 TONSLQ96HA7 1378 aa24.82■■□□□ 1.56
MMP9-201ENST00000372330 DISP1Q96F81 1524 aa24.8■■□□□ 1.56
MMP9-201ENST00000372330 RTN4Q9NQC3 1192 aaKnown RBP24.8■■□□□ 1.56
MMP9-201ENST00000372330 MIA2Q96PC5 1412 aa24.79■■□□□ 1.56
MMP9-201ENST00000372330 KIAA0556O60303 1618 aa24.79■■□□□ 1.56
MMP9-201ENST00000372330 WASHC2CQ9Y4E1 1318 aa24.79■■□□□ 1.56
MMP9-201ENST00000372330 CEP170Q5SW79 1584 aa24.79■■□□□ 1.56
MMP9-201ENST00000372330 ZBED9Q6R2W3 1325 aa24.78■■□□□ 1.56
MMP9-201ENST00000372330 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.78■■□□□ 1.56
MMP9-201ENST00000372330 AKNAQ7Z591 1439 aa24.76■■□□□ 1.55
MMP9-201ENST00000372330 GCC2Q8IWJ2 1684 aa24.73■■□□□ 1.55
MMP9-201ENST00000372330 RRP7BPQ9NSQ0 103 aa24.73■■□□□ 1.55
MMP9-201ENST00000372330 CHIC2Q9UKJ5 165 aa24.73■■□□□ 1.55
MMP9-201ENST00000372330 KDM6BO15054 1643 aa24.69■■□□□ 1.54
MMP9-201ENST00000372330 NUP160Q12769 1436 aa24.68■■□□□ 1.54
MMP9-201ENST00000372330 PPM1GO15355 546 aaPredicted RBP24.67■■□□□ 1.54
MMP9-201ENST00000372330 NUP153P49790 1475 aaKnown RBP24.66■■□□□ 1.54
MMP9-201ENST00000372330 NEFMP07197 916 aa24.65■■□□□ 1.54
MMP9-201ENST00000372330 RAPGEF6Q8TEU7 1601 aa24.64■■□□□ 1.53
MMP9-201ENST00000372330 DENND4BO75064 1496 aaPredicted RBP24.64■■□□□ 1.53
MMP9-201ENST00000372330 JPH4Q96JJ6 628 aa24.63■■□□□ 1.53
MMP9-201ENST00000372330 KDM5BQ9UGL1 1544 aa24.63■■□□□ 1.53
MMP9-201ENST00000372330 RNF123Q5XPI4 1314 aa24.6■■□□□ 1.53
MMP9-201ENST00000372330 SMG6Q86US8 1419 aaKnown RBP24.58■■□□□ 1.53
MMP9-201ENST00000372330 DAPK1P53355 1430 aa24.58■■□□□ 1.52
MMP9-201ENST00000372330 ROCK1Q13464 1354 aa24.58■■□□□ 1.52
MMP9-201ENST00000372330 ZNF644Q9H582 1327 aaPredicted RBP24.56■■□□□ 1.52
MMP9-201ENST00000372330 CARMIL2Q6F5E8 1435 aa24.56■■□□□ 1.52
MMP9-201ENST00000372330 CNTLNQ9NXG0 1405 aa24.56■■□□□ 1.52
MMP9-201ENST00000372330 MPHOSPH9Q99550 1183 aa24.55■■□□□ 1.52
MMP9-201ENST00000372330 DNMT1P26358 1616 aaKnown RBP24.55■■□□□ 1.52
MMP9-201ENST00000372330 PLB1Q6P1J6 1458 aa24.54■■□□□ 1.52
MMP9-201ENST00000372330 FAM9BQ8IZU0 186 aa24.54■■□□□ 1.52
MMP9-201ENST00000372330 PRKRIP1Q9H875 184 aaPredicted RBP24.53■■□□□ 1.52
MMP9-201ENST00000372330 ABCC5O15440 1437 aa24.53■■□□□ 1.52
MMP9-201ENST00000372330 EIF5BO60841 1220 aaKnown RBP24.53■■□□□ 1.52
MMP9-201ENST00000372330 RSPH6AQ9H0K4 717 aa24.53■■□□□ 1.52
MMP9-201ENST00000372330 MRS2Q9HD23 443 aa24.52■■□□□ 1.52
MMP9-201ENST00000372330 CCDC184Q52MB2 194 aa24.51■■□□□ 1.51
MMP9-201ENST00000372330 GSE1Q14687 1217 aa24.51■■□□□ 1.51
MMP9-201ENST00000372330 TROQ12816 1431 aaPredicted RBP24.5■■□□□ 1.51
MMP9-201ENST00000372330 PRG4Q92954 1404 aaPredicted RBP24.5■■□□□ 1.51
MMP9-201ENST00000372330 TCERG1O14776 1098 aaKnown RBP24.48■■□□□ 1.51
MMP9-201ENST00000372330 CHD1O14646 1710 aa24.47■■□□□ 1.51
MMP9-201ENST00000372330 FOXD1Q16676 465 aa24.47■■□□□ 1.51
MMP9-201ENST00000372330 NUDCQ9Y266 331 aa24.46■■□□□ 1.51
MMP9-201ENST00000372330 BRPF3Q9ULD4 1205 aa24.45■■□□□ 1.51
MMP9-201ENST00000372330 LAS1LQ9Y4W2 734 aaKnown RBP24.45■■□□□ 1.51
MMP9-201ENST00000372330 HSPA5P11021 654 aaKnown RBP24.45■■□□□ 1.5
MMP9-201ENST00000372330 EIF4G2P78344 907 aaKnown RBP eCLIP24.43■■□□□ 1.5
MMP9-201ENST00000372330 KIF14Q15058 1648 aa24.42■■□□□ 1.5
MMP9-201ENST00000372330 ITSN2Q9NZM3 1697 aa24.41■■□□□ 1.5
MMP9-201ENST00000372330 CFDP1Q9UEE9 299 aaPredicted RBP24.41■■□□□ 1.5
MMP9-201ENST00000372330 ANKRD30BQ9BXX2 1392 aa24.41■■□□□ 1.5
MMP9-201ENST00000372330 CAMSAP2Q08AD1 1489 aa24.41■■□□□ 1.5
MMP9-201ENST00000372330 MS4A1P11836 297 aa24.4■■□□□ 1.5
MMP9-201ENST00000372330 PKNOX2Q96KN3 472 aa24.4■■□□□ 1.5
MMP9-201ENST00000372330 ADCY10Q96PN6 1610 aa24.4■■□□□ 1.5
MMP9-201ENST00000372330 GPATCH8Q9UKJ3 1502 aaKnown RBP24.4■■□□□ 1.5
MMP9-201ENST00000372330 L3MBTL2Q969R5 705 aa24.39■■□□□ 1.5
MMP9-201ENST00000372330 NPM2Q86SE8 214 aaKnown RBP24.38■■□□□ 1.49
MMP9-201ENST00000372330 DDRGK1Q96HY6 314 aa24.38■■□□□ 1.49
MMP9-201ENST00000372330 RPRD2Q5VT52 1461 aaKnown RBP24.38■■□□□ 1.49
MMP9-201ENST00000372330 ABCA8O94911 1581 aa24.38■■□□□ 1.49
MMP9-201ENST00000372330 PDE4AP27815 886 aa24.36■■□□□ 1.49
MMP9-201ENST00000372330 FAM43AQ8N2R8 423 aa24.36■■□□□ 1.49
MMP9-201ENST00000372330 BACH2Q9BYV9 841 aa24.35■■□□□ 1.49
MMP9-201ENST00000372330 GLIPR1L2Q4G1C9 344 aa24.35■■□□□ 1.49
MMP9-201ENST00000372330 SLC4A1APQ9BWU0 796 aaKnown RBP24.35■■□□□ 1.49
MMP9-201ENST00000372330 NCOA1Q15788 1441 aa24.34■■□□□ 1.49
MMP9-201ENST00000372330 CCDC7Q96M83 1385 aa24.33■■□□□ 1.48
MMP9-201ENST00000372330 ADGRL2O95490 1459 aa24.31■■□□□ 1.48
MMP9-201ENST00000372330 TEX14Q8IWB6 1497 aa24.31■■□□□ 1.48
MMP9-201ENST00000372330 ADGBQ8N7X0 1667 aa24.3■■□□□ 1.48
MMP9-201ENST00000372330 ATP10BO94823 1461 aa24.3■■□□□ 1.48
MMP9-201ENST00000372330 PTPRGP23470 1445 aa24.3■■□□□ 1.48
MMP9-201ENST00000372330 ZNF777Q9ULD5 760 aaPredicted RBP24.29■■□□□ 1.48
MMP9-201ENST00000372330 PZPP20742 1482 aa24.28■■□□□ 1.48
MMP9-201ENST00000372330 CROCC2H7BZ55 1655 aa24.27■■□□□ 1.48
MMP9-201ENST00000372330 PLEKHD1A6NEE1 506 aa24.27■■□□□ 1.48
MMP9-201ENST00000372330 NFKBIBQ15653 356 aa24.26■■□□□ 1.47
MMP9-201ENST00000372330 SHROOM2Q13796 1616 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms