RNA–Protein interactions for RNA: ENST00000372207.3

BEST4-201, Transcript of bestrophin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST4, Length 2,047 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4-201ENST00000372207 UHRF1BP1LA0JNW5 1464 aa29.07■■■□□ 2.24
BEST4-201ENST00000372207 DNMT1P26358 1616 aaKnown RBP29.04■■■□□ 2.24
BEST4-201ENST00000372207 ROCK1Q13464 1354 aa29.03■■■□□ 2.24
BEST4-201ENST00000372207 KDM5BQ9UGL1 1544 aa28.99■■■□□ 2.23
BEST4-201ENST00000372207 CDC42BPAQ5VT25 1732 aa28.98■■■□□ 2.23
BEST4-201ENST00000372207 KCNH8Q96L42 1107 aa28.95■■■□□ 2.23
BEST4-201ENST00000372207 GCC2Q8IWJ2 1684 aa28.94■■■□□ 2.22
BEST4-201ENST00000372207 SIN3AQ96ST3 1273 aa28.93■■■□□ 2.22
BEST4-201ENST00000372207 ZCCHC11Q5TAX3 1644 aaKnown RBP28.91■■■□□ 2.22
BEST4-201ENST00000372207 ZNF316A6NFI3 1004 aaPredicted RBP28.9■■■□□ 2.22
BEST4-201ENST00000372207 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.89■■■□□ 2.22
BEST4-201ENST00000372207 NEUROD1Q13562 356 aa28.89■■■□□ 2.21
BEST4-201ENST00000372207 TRIM52Q96A61 297 aa28.89■■■□□ 2.21
BEST4-201ENST00000372207 KDM6BO15054 1643 aa28.89■■■□□ 2.21
BEST4-201ENST00000372207 NCOA1Q15788 1441 aa28.88■■■□□ 2.21
BEST4-201ENST00000372207 TTC37Q6PGP7 1564 aa28.86■■■□□ 2.21
BEST4-201ENST00000372207 HNRNPMP52272 730 aaKnown RBP eCLIP28.86■■■□□ 2.21
BEST4-201ENST00000372207 PREX2Q70Z35 1606 aa28.83■■■□□ 2.21
BEST4-201ENST00000372207 ADGRL2O95490 1459 aa28.83■■■□□ 2.21
BEST4-201ENST00000372207 ACIN1Q9UKV3 1341 aaKnown RBP28.83■■■□□ 2.21
BEST4-201ENST00000372207 ANKRD30AQ9BXX3 1397 aa28.82■■■□□ 2.2
BEST4-201ENST00000372207 TSPY4P0CV99 314 aa28.82■■■□□ 2.2
BEST4-201ENST00000372207 TSPY10P0CW01 314 aa28.82■■■□□ 2.2
BEST4-201ENST00000372207 MBD5Q9P267 1494 aa28.81■■■□□ 2.2
BEST4-201ENST00000372207 CDC42BPBQ9Y5S2 1711 aa28.81■■■□□ 2.2
BEST4-201ENST00000372207 TIMELESSQ9UNS1 1208 aa28.81■■■□□ 2.2
BEST4-201ENST00000372207 SHANK2Q9UPX8 1470 aa28.79■■■□□ 2.2
BEST4-201ENST00000372207 ARHGAP5Q13017 1502 aa28.79■■■□□ 2.2
BEST4-201ENST00000372207 MPHOSPH9Q99550 1183 aa28.79■■■□□ 2.2
BEST4-201ENST00000372207 SAMD9LQ8IVG5 1584 aa28.78■■■□□ 2.2
BEST4-201ENST00000372207 C9orf84Q5VXU9 1444 aa28.78■■■□□ 2.2
BEST4-201ENST00000372207 RSPH4AQ5TD94 716 aa28.78■■■□□ 2.2
BEST4-201ENST00000372207 CROCC2H7BZ55 1655 aa28.78■■■□□ 2.2
BEST4-201ENST00000372207 PLCH2O75038 1416 aa28.75■■■□□ 2.19
BEST4-201ENST00000372207 ARHGEF5Q12774 1597 aa28.75■■■□□ 2.19
BEST4-201ENST00000372207 DENND4BO75064 1496 aaPredicted RBP28.75■■■□□ 2.19
BEST4-201ENST00000372207 ADGBQ8N7X0 1667 aa28.73■■■□□ 2.19
BEST4-201ENST00000372207 WDR7Q9Y4E6 1490 aa28.73■■■□□ 2.19
BEST4-201ENST00000372207 DIEXFQ68CQ4 756 aaKnown RBP28.72■■■□□ 2.19
BEST4-201ENST00000372207 CCDC141Q6ZP82 1450 aa28.72■■■□□ 2.19
BEST4-201ENST00000372207 EFCAB2Q5VUJ9 269 aa28.7■■■□□ 2.19
BEST4-201ENST00000372207 ANKRD50Q9ULJ7 1429 aa28.7■■■□□ 2.18
BEST4-201ENST00000372207 KIAA1107Q9UPP5 1409 aa28.7■■■□□ 2.18
BEST4-201ENST00000372207 MYO5CQ9NQX4 1742 aa28.7■■■□□ 2.18
BEST4-201ENST00000372207 SYCP2Q9BX26 1530 aa28.67■■■□□ 2.18
BEST4-201ENST00000372207 PLEKHH2Q8IVE3 1493 aa28.67■■■□□ 2.18
BEST4-201ENST00000372207 NPM1P06748 294 aaKnown RBP eCLIP28.66■■■□□ 2.18
BEST4-201ENST00000372207 SLC4A1APQ9BWU0 796 aaKnown RBP28.65■■■□□ 2.18
BEST4-201ENST00000372207 ASXL2Q76L83 1435 aa28.65■■■□□ 2.18
BEST4-201ENST00000372207 KIF15Q9NS87 1388 aa28.64■■■□□ 2.18
BEST4-201ENST00000372207 TONSLQ96HA7 1378 aa28.64■■■□□ 2.17
BEST4-201ENST00000372207 FOXD1Q16676 465 aa28.64■■■□□ 2.17
BEST4-201ENST00000372207 PPP1R15AO75807 674 aaPredicted RBP28.63■■■□□ 2.17
BEST4-201ENST00000372207 ARHGEF12Q9NZN5 1544 aa28.6■■■□□ 2.17
BEST4-201ENST00000372207 PZPP20742 1482 aa28.57■■■□□ 2.16
BEST4-201ENST00000372207 ARAP3Q8WWN8 1544 aa28.56■■■□□ 2.16
BEST4-201ENST00000372207 ANKRD30BQ9BXX2 1392 aa28.56■■■□□ 2.16
BEST4-201ENST00000372207 MAST1Q9Y2H9 1570 aa28.52■■■□□ 2.16
BEST4-201ENST00000372207 ABCC1P33527 1531 aa28.52■■■□□ 2.16
BEST4-201ENST00000372207 NUP155O75694 1391 aa28.51■■■□□ 2.16
BEST4-201ENST00000372207 ABCA9Q8IUA7 1624 aa28.51■■■□□ 2.15
BEST4-201ENST00000372207 TRAPPC8Q9Y2L5 1435 aa28.5■■■□□ 2.15
BEST4-201ENST00000372207 FANCAO15360 1455 aa28.48■■■□□ 2.15
BEST4-201ENST00000372207 PKD2Q13563 968 aa28.47■■■□□ 2.15
BEST4-201ENST00000372207 AFAP1Q8N556 730 aa28.45■■■□□ 2.15
BEST4-201ENST00000372207 CYB5RLQ6IPT4 315 aa28.44■■■□□ 2.14
BEST4-201ENST00000372207 PLXNC1O60486 1568 aa28.41■■■□□ 2.14
BEST4-201ENST00000372207 RPRD2Q5VT52 1461 aaKnown RBP28.41■■■□□ 2.14
BEST4-201ENST00000372207 SPAG9O60271 1321 aaKnown RBP28.4■■■□□ 2.14
BEST4-201ENST00000372207 KDM5DQ9BY66 1539 aa28.4■■■□□ 2.14
BEST4-201ENST00000372207 L3MBTL2Q969R5 705 aa28.39■■■□□ 2.14
BEST4-201ENST00000372207 RTEL1-TNFRSF6BF6WH68 1400 aa28.36■■■□□ 2.13
BEST4-201ENST00000372207 DUOX2Q9NRD8 1548 aa28.36■■■□□ 2.13
BEST4-201ENST00000372207 ADGRL1O94910 1474 aa28.36■■■□□ 2.13
BEST4-201ENST00000372207 SCAPERQ9BY12 1400 aa28.35■■■□□ 2.13
BEST4-201ENST00000372207 CD109Q6YHK3 1445 aa28.35■■■□□ 2.13
BEST4-201ENST00000372207 ERBINQ96RT1 1412 aa28.33■■■□□ 2.12
BEST4-201ENST00000372207 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.31■■■□□ 2.12
BEST4-201ENST00000372207 RIMBP3CA6NJZ7 1639 aa28.3■■■□□ 2.12
BEST4-201ENST00000372207 RIMBP3BA6NNM3 1639 aa28.3■■■□□ 2.12
BEST4-201ENST00000372207 RIMBP3Q9UFD9 1639 aa28.3■■■□□ 2.12
BEST4-201ENST00000372207 FAM135AQ9P2D6 1515 aa28.29■■■□□ 2.12
BEST4-201ENST00000372207 ZFYVE16Q7Z3T8 1539 aa28.28■■■□□ 2.12
BEST4-201ENST00000372207 TEX14Q8IWB6 1497 aa28.27■■■□□ 2.12
BEST4-201ENST00000372207 UNC13BO14795 1591 aa28.25■■■□□ 2.11
BEST4-201ENST00000372207 MIER1Q8N108 512 aa28.24■■■□□ 2.11
BEST4-201ENST00000372207 HIRIP3Q9BW71 556 aaPredicted RBP28.23■■■□□ 2.11
BEST4-201ENST00000372207 MYT1LQ9UL68 1186 aa28.23■■■□□ 2.11
BEST4-201ENST00000372207 ATP7AQ04656 1500 aa28.21■■■□□ 2.11
BEST4-201ENST00000372207 MAGI2Q86UL8 1455 aa28.19■■■□□ 2.1
BEST4-201ENST00000372207 INO80Q9ULG1 1556 aaPredicted RBP28.18■■■□□ 2.1
BEST4-201ENST00000372207 ZNF518AQ6AHZ1 1483 aa28.17■■■□□ 2.1
BEST4-201ENST00000372207 NBPF8Q3BBV2 869 aa28.17■■■□□ 2.1
BEST4-201ENST00000372207 IQGAP3Q86VI3 1631 aa28.14■■■□□ 2.1
BEST4-201ENST00000372207 CFAP74Q9C0B2 1584 aa28.13■■■□□ 2.09
BEST4-201ENST00000372207 DHX29Q7Z478 1369 aaKnown RBP28.12■■■□□ 2.09
BEST4-201ENST00000372207 POGZQ7Z3K3 1410 aa28.12■■■□□ 2.09
BEST4-201ENST00000372207 NEO1Q92859 1461 aa28.11■■■□□ 2.09
BEST4-201ENST00000372207 PLA2R1Q13018 1463 aa28.09■■■□□ 2.09
BEST4-201ENST00000372207 KIF3BO15066 747 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms