RNA–Protein interactions for RNA: ENST00000372108.9

GTF3C5-204, Transcript of general transcription factor IIIC subunit 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C5, Length 2,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-204ENST00000372108 ZCCHC11Q5TAX3 1644 aaKnown RBP22.95■■□□□ 1.26
GTF3C5-204ENST00000372108 AKNAQ7Z591 1439 aa22.95■■□□□ 1.26
GTF3C5-204ENST00000372108 MAPKBP1O60336 1514 aa22.95■■□□□ 1.26
GTF3C5-204ENST00000372108 RRP7BPQ9NSQ0 103 aa22.94■■□□□ 1.26
GTF3C5-204ENST00000372108 ZNF777Q9ULD5 760 aaPredicted RBP22.93■■□□□ 1.26
GTF3C5-204ENST00000372108 GCC2Q8IWJ2 1684 aa22.91■■□□□ 1.26
GTF3C5-204ENST00000372108 ROCK1Q13464 1354 aa22.89■■□□□ 1.26
GTF3C5-204ENST00000372108 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.87■■□□□ 1.255e-6■■■■□ 19.7
GTF3C5-204ENST00000372108 TTC37Q6PGP7 1564 aa22.86■■□□□ 1.25
GTF3C5-204ENST00000372108 PREX2Q70Z35 1606 aa22.86■■□□□ 1.25
GTF3C5-204ENST00000372108 CDC42BPBQ9Y5S2 1711 aa22.85■■□□□ 1.25
GTF3C5-204ENST00000372108 KCNH8Q96L42 1107 aa22.84■■□□□ 1.25
GTF3C5-204ENST00000372108 KDM6BO15054 1643 aa22.84■■□□□ 1.25
GTF3C5-204ENST00000372108 CROCC2H7BZ55 1655 aa22.82■■□□□ 1.24
GTF3C5-204ENST00000372108 SAMD9LQ8IVG5 1584 aa22.79■■□□□ 1.24
GTF3C5-204ENST00000372108 NCOA1Q15788 1441 aa22.78■■□□□ 1.24
GTF3C5-204ENST00000372108 ADGRL2O95490 1459 aa22.78■■□□□ 1.24
GTF3C5-204ENST00000372108 ADGBQ8N7X0 1667 aa22.78■■□□□ 1.24
GTF3C5-204ENST00000372108 MBD5Q9P267 1494 aa22.77■■□□□ 1.24
GTF3C5-204ENST00000372108 MYO5CQ9NQX4 1742 aa22.77■■□□□ 1.24
GTF3C5-204ENST00000372108 HNRNPMP52272 730 aaKnown RBP eCLIP22.76■■□□□ 1.23
GTF3C5-204ENST00000372108 ARHGAP5Q13017 1502 aa22.76■■□□□ 1.23
GTF3C5-204ENST00000372108 ARHGEF5Q12774 1597 aa22.76■■□□□ 1.23
GTF3C5-204ENST00000372108 SHANK2Q9UPX8 1470 aa22.75■■□□□ 1.23
GTF3C5-204ENST00000372108 SIN3AQ96ST3 1273 aa22.74■■□□□ 1.23
GTF3C5-204ENST00000372108 WDR7Q9Y4E6 1490 aa22.74■■□□□ 1.23
GTF3C5-204ENST00000372108 PLCH2O75038 1416 aa22.73■■□□□ 1.23
GTF3C5-204ENST00000372108 TRIM52Q96A61 297 aa22.72■■□□□ 1.23
GTF3C5-204ENST00000372108 ANKRD30AQ9BXX3 1397 aa22.72■■□□□ 1.23
GTF3C5-204ENST00000372108 C9orf84Q5VXU9 1444 aa22.72■■□□□ 1.23
GTF3C5-204ENST00000372108 TSPY4P0CV99 314 aa22.7■■□□□ 1.22
GTF3C5-204ENST00000372108 TSPY10P0CW01 314 aa22.7■■□□□ 1.22
GTF3C5-204ENST00000372108 ACIN1Q9UKV3 1341 aaKnown RBP22.69■■□□□ 1.22
GTF3C5-204ENST00000372108 NEUROD1Q13562 356 aa22.69■■□□□ 1.22
GTF3C5-204ENST00000372108 RSPH4AQ5TD94 716 aa22.69■■□□□ 1.22
GTF3C5-204ENST00000372108 DENND4BO75064 1496 aaPredicted RBP22.69■■□□□ 1.22
GTF3C5-204ENST00000372108 CCDC141Q6ZP82 1450 aa22.69■■□□□ 1.22
GTF3C5-204ENST00000372108 SYCP2Q9BX26 1530 aa22.68■■□□□ 1.22
GTF3C5-204ENST00000372108 ASXL2Q76L83 1435 aa22.68■■□□□ 1.22
GTF3C5-204ENST00000372108 KIAA1107Q9UPP5 1409 aa22.67■■□□□ 1.22
GTF3C5-204ENST00000372108 ZNF316A6NFI3 1004 aaPredicted RBP22.66■■□□□ 1.22
GTF3C5-204ENST00000372108 MPHOSPH9Q99550 1183 aa22.66■■□□□ 1.22
GTF3C5-204ENST00000372108 PLEKHH2Q8IVE3 1493 aa22.65■■□□□ 1.22
GTF3C5-204ENST00000372108 EFCAB2Q5VUJ9 269 aa22.65■■□□□ 1.22
GTF3C5-204ENST00000372108 NPM1P06748 294 aaKnown RBP eCLIP22.64■■□□□ 1.21
GTF3C5-204ENST00000372108 TIMELESSQ9UNS1 1208 aa22.63■■□□□ 1.21
GTF3C5-204ENST00000372108 ARAP3Q8WWN8 1544 aa22.62■■□□□ 1.21
GTF3C5-204ENST00000372108 ARHGEF12Q9NZN5 1544 aa22.62■■□□□ 1.21
GTF3C5-204ENST00000372108 ANKRD50Q9ULJ7 1429 aa22.62■■□□□ 1.21
GTF3C5-204ENST00000372108 ABCA9Q8IUA7 1624 aa22.62■■□□□ 1.21
GTF3C5-204ENST00000372108 KIF15Q9NS87 1388 aa22.59■■□□□ 1.21
GTF3C5-204ENST00000372108 MAST1Q9Y2H9 1570 aa22.59■■□□□ 1.21
GTF3C5-204ENST00000372108 ABCC1P33527 1531 aa22.58■■□□□ 1.21
GTF3C5-204ENST00000372108 PELP1Q8IZL8 1130 aaKnown RBP22.57■■□□□ 1.2
GTF3C5-204ENST00000372108 PZPP20742 1482 aa22.56■■□□□ 1.2
GTF3C5-204ENST00000372108 SLC4A1APQ9BWU0 796 aaKnown RBP22.54■■□□□ 1.2
GTF3C5-204ENST00000372108 FOXD1Q16676 465 aa22.54■■□□□ 1.2
GTF3C5-204ENST00000372108 RIMBP3CA6NJZ7 1639 aa22.53■■□□□ 1.2
GTF3C5-204ENST00000372108 RIMBP3BA6NNM3 1639 aa22.53■■□□□ 1.2
GTF3C5-204ENST00000372108 RIMBP3Q9UFD9 1639 aa22.53■■□□□ 1.2
GTF3C5-204ENST00000372108 TRAPPC8Q9Y2L5 1435 aa22.52■■□□□ 1.2
GTF3C5-204ENST00000372108 FANCAO15360 1455 aa22.52■■□□□ 1.2
GTF3C5-204ENST00000372108 TONSLQ96HA7 1378 aa22.5■■□□□ 1.19
GTF3C5-204ENST00000372108 PPP1R15AO75807 674 aaPredicted RBP22.5■■□□□ 1.19
GTF3C5-204ENST00000372108 CYB5RLQ6IPT4 315 aa22.5■■□□□ 1.19
GTF3C5-204ENST00000372108 PLXNC1O60486 1568 aa22.5■■□□□ 1.19
GTF3C5-204ENST00000372108 ANKRD30BQ9BXX2 1392 aa22.49■■□□□ 1.19
GTF3C5-204ENST00000372108 DIEXFQ68CQ4 756 aaKnown RBP22.48■■□□□ 1.19
GTF3C5-204ENST00000372108 NUP155O75694 1391 aa22.46■■□□□ 1.19
GTF3C5-204ENST00000372108 KDM5DQ9BY66 1539 aa22.45■■□□□ 1.18
GTF3C5-204ENST00000372108 AFAP1Q8N556 730 aa22.45■■□□□ 1.18
GTF3C5-204ENST00000372108 CD109Q6YHK3 1445 aa22.42■■□□□ 1.18
GTF3C5-204ENST00000372108 DUOX2Q9NRD8 1548 aa22.42■■□□□ 1.18
GTF3C5-204ENST00000372108 PKD2Q13563 968 aa22.42■■□□□ 1.18
GTF3C5-204ENST00000372108 ADGRL1O94910 1474 aa22.42■■□□□ 1.18
GTF3C5-204ENST00000372108 SPAG9O60271 1321 aaKnown RBP22.41■■□□□ 1.18
GTF3C5-204ENST00000372108 RTEL1-TNFRSF6BF6WH68 1400 aa22.41■■□□□ 1.18
GTF3C5-204ENST00000372108 SCAPERQ9BY12 1400 aa22.4■■□□□ 1.18
GTF3C5-204ENST00000372108 RPRD2Q5VT52 1461 aaKnown RBP22.4■■□□□ 1.18
GTF3C5-204ENST00000372108 ZFYVE16Q7Z3T8 1539 aa22.38■■□□□ 1.17
GTF3C5-204ENST00000372108 ERBINQ96RT1 1412 aa22.37■■□□□ 1.17
GTF3C5-204ENST00000372108 UNC13BO14795 1591 aa22.37■■□□□ 1.17
GTF3C5-204ENST00000372108 FAM135AQ9P2D6 1515 aa22.34■■□□□ 1.17
GTF3C5-204ENST00000372108 INO80Q9ULG1 1556 aaPredicted RBP22.34■■□□□ 1.17
GTF3C5-204ENST00000372108 CFAP74Q9C0B2 1584 aa22.33■■□□□ 1.17
GTF3C5-204ENST00000372108 ATP7AQ04656 1500 aa22.33■■□□□ 1.16
GTF3C5-204ENST00000372108 L3MBTL2Q969R5 705 aa22.33■■□□□ 1.16
GTF3C5-204ENST00000372108 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.3■■□□□ 1.165e-8■■■□□ 19
GTF3C5-204ENST00000372108 MAGI2Q86UL8 1455 aa22.29■■□□□ 1.16
GTF3C5-204ENST00000372108 TEX14Q8IWB6 1497 aa22.29■■□□□ 1.16
GTF3C5-204ENST00000372108 ZNF518AQ6AHZ1 1483 aa22.28■■□□□ 1.16
GTF3C5-204ENST00000372108 IQGAP3Q86VI3 1631 aa22.28■■□□□ 1.16
GTF3C5-204ENST00000372108 MAP3K4Q9Y6R4 1608 aa22.26■■□□□ 1.15
GTF3C5-204ENST00000372108 GLI2P10070 1586 aa22.26■■□□□ 1.15
GTF3C5-204ENST00000372108 NEO1Q92859 1461 aa22.26■■□□□ 1.15
GTF3C5-204ENST00000372108 POGZQ7Z3K3 1410 aa22.25■■□□□ 1.15
GTF3C5-204ENST00000372108 KIDINS220Q9ULH0 1771 aa22.24■■□□□ 1.15
GTF3C5-204ENST00000372108 MYT1LQ9UL68 1186 aa22.24■■□□□ 1.15
GTF3C5-204ENST00000372108 KDM5CP41229 1560 aa22.23■■□□□ 1.15
GTF3C5-204ENST00000372108 MYT1Q01538 1121 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms