RNA–Protein interactions for RNA: ENST00000371655.3

RAB3B-201, Transcript of RAB3B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3B, Length 12,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3B-201ENST00000371655 OSCARQ8IYS5 282 aa8.41□□□□□ -1.06
RAB3B-201ENST00000371655 STAC3Q96MF2 364 aa8.41□□□□□ -1.06
RAB3B-201ENST00000371655 MIA2Q96PC5 1412 aa8.4□□□□□ -1.06
RAB3B-201ENST00000371655 PHLDB1Q86UU1 1377 aa8.4□□□□□ -1.06
RAB3B-201ENST00000371655 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.4□□□□□ -1.06
RAB3B-201ENST00000371655 NESP48681 1621 aa8.4□□□□□ -1.06
RAB3B-201ENST00000371655 L3MBTL2Q969R5 705 aa8.39□□□□□ -1.07
RAB3B-201ENST00000371655 UACAQ9BZF9 1416 aa8.39□□□□□ -1.07
RAB3B-201ENST00000371655 GGT6Q6P531 493 aa8.39□□□□□ -1.07
RAB3B-201ENST00000371655 NCOA2Q15596 1464 aa8.39□□□□□ -1.07
RAB3B-201ENST00000371655 PNNQ9H307 717 aaKnown RBP8.39□□□□□ -1.07
RAB3B-201ENST00000371655 ERICH6BQ5W0A0 696 aa8.38□□□□□ -1.07
RAB3B-201ENST00000371655 KTN1Q86UP2 1357 aaKnown RBP8.38□□□□□ -1.07
RAB3B-201ENST00000371655 CCDC144AA2RUR9 1427 aa8.38□□□□□ -1.07
RAB3B-201ENST00000371655 KIAA0586Q9BVV6 1533 aa8.38□□□□□ -1.07
RAB3B-201ENST00000371655 SCAF1Q9H7N4 1312 aaKnown RBP8.38□□□□□ -1.07
RAB3B-201ENST00000371655 PLPPR3Q6T4P5 718 aa8.38□□□□□ -1.07
RAB3B-201ENST00000371655 CHMP4BQ9H444 224 aaKnown RBP8.38□□□□□ -1.07
RAB3B-201ENST00000371655 EHBP1L1Q8N3D4 1523 aa8.38□□□□□ -1.07
RAB3B-201ENST00000371655 MYH16Q9H6N6 1097 aa8.37□□□□□ -1.07
RAB3B-201ENST00000371655 KIF3BO15066 747 aa8.37□□□□□ -1.07
RAB3B-201ENST00000371655 HNRNPMP52272 730 aaKnown RBP eCLIP8.37□□□□□ -1.07
RAB3B-201ENST00000371655 SALL2Q9Y467 1007 aaPredicted RBP8.37□□□□□ -1.07
RAB3B-201ENST00000371655 MS4A1P11836 297 aa8.37□□□□□ -1.07
RAB3B-201ENST00000371655 MAPK8IP3Q9UPT6 1336 aa8.37□□□□□ -1.07
RAB3B-201ENST00000371655 MAP3K1Q13233 1512 aa8.37□□□□□ -1.07
RAB3B-201ENST00000371655 FOXD1Q16676 465 aa8.36□□□□□ -1.07
RAB3B-201ENST00000371655 C14orf37Q86TY3 774 aa8.36□□□□□ -1.07
RAB3B-201ENST00000371655 EIF5BO60841 1220 aaKnown RBP8.36□□□□□ -1.07
RAB3B-201ENST00000371655 SYNJ2O15056 1496 aa8.36□□□□□ -1.07
RAB3B-201ENST00000371655 PLEKHH2Q8IVE3 1493 aa8.36□□□□□ -1.07
RAB3B-201ENST00000371655 ANKRD50Q9ULJ7 1429 aa8.35□□□□□ -1.07
RAB3B-201ENST00000371655 PPP4R2Q9NY27 417 aa8.35□□□□□ -1.07
RAB3B-201ENST00000371655 KIF15Q9NS87 1388 aa8.35□□□□□ -1.07
RAB3B-201ENST00000371655 TROQ12816 1431 aaPredicted RBP8.35□□□□□ -1.07
RAB3B-201ENST00000371655 HAP1P54257 671 aaPredicted RBP8.34□□□□□ -1.07
RAB3B-201ENST00000371655 CUL7Q14999 1698 aa8.34□□□□□ -1.07
RAB3B-201ENST00000371655 WASHC2CQ9Y4E1 1318 aa8.34□□□□□ -1.07
RAB3B-201ENST00000371655 NLRP13Q86W25 1043 aa8.33□□□□□ -1.08
RAB3B-201ENST00000371655 MAGI1Q96QZ7 1491 aaPredicted RBP8.33□□□□□ -1.08
RAB3B-201ENST00000371655 PRG4Q92954 1404 aaPredicted RBP8.33□□□□□ -1.08
RAB3B-201ENST00000371655 UNC13AQ9UPW8 1703 aa8.33□□□□□ -1.08
RAB3B-201ENST00000371655 HECW1Q76N89 1606 aa8.33□□□□□ -1.08
RAB3B-201ENST00000371655 TIAM1Q13009 1591 aa8.32□□□□□ -1.08
RAB3B-201ENST00000371655 HFM1A2PYH4 1435 aa8.32□□□□□ -1.08
RAB3B-201ENST00000371655 SNAPC4Q5SXM2 1469 aa8.32□□□□□ -1.08
RAB3B-201ENST00000371655 HDGFL2Q7Z4V5 671 aaPredicted RBP8.32□□□□□ -1.08
RAB3B-201ENST00000371655 MORC1Q86VD1 984 aa8.32□□□□□ -1.08
RAB3B-201ENST00000371655 PDE3BQ13370 1112 aa8.31□□□□□ -1.08
RAB3B-201ENST00000371655 HSP90AA1P07900 732 aaKnown RBP8.31□□□□□ -1.08
RAB3B-201ENST00000371655 NPM2Q86SE8 214 aaKnown RBP8.31□□□□□ -1.08
RAB3B-201ENST00000371655 BIVM-ERCC5R4GMW8 1640 aa8.3□□□□□ -1.08
RAB3B-201ENST00000371655 SRPK2P78362 688 aaKnown RBP8.3□□□□□ -1.08
RAB3B-201ENST00000371655 CC2D1BQ5T0F9 858 aaKnown RBP8.3□□□□□ -1.08
RAB3B-201ENST00000371655 DDRGK1Q96HY6 314 aa8.3□□□□□ -1.08
RAB3B-201ENST00000371655 SUPT16HQ9Y5B9 1047 aaKnown RBP8.29□□□□□ -1.08
RAB3B-201ENST00000371655 VGFO15240 615 aaPredicted RBP8.29□□□□□ -1.08
RAB3B-201ENST00000371655 TERF2IPQ9NYB0 399 aa8.29□□□□□ -1.08
RAB3B-201ENST00000371655 USP47Q96K76 1375 aa8.28□□□□□ -1.08
RAB3B-201ENST00000371655 EPRSP07814 1512 aaKnown RBP8.28□□□□□ -1.08
RAB3B-201ENST00000371655 IQGAP2Q13576 1575 aa8.28□□□□□ -1.08
RAB3B-201ENST00000371655 CALD1Q05682 793 aaKnown RBP8.28□□□□□ -1.08
RAB3B-201ENST00000371655 ROCK1Q13464 1354 aa8.28□□□□□ -1.08
RAB3B-201ENST00000371655 FTSJ3Q8IY81 847 aaKnown RBP8.27□□□□□ -1.08
RAB3B-201ENST00000371655 MLECQ14165 292 aa8.27□□□□□ -1.09
RAB3B-201ENST00000371655 GRIN2AQ12879 1464 aa8.27□□□□□ -1.09
RAB3B-201ENST00000371655 ST20-MTHFSA0A0A6YYL1 179 aa8.27□□□□□ -1.09
RAB3B-201ENST00000371655 PPM1GO15355 546 aaPredicted RBP8.27□□□□□ -1.09
RAB3B-201ENST00000371655 TRHP20396 242 aaPredicted RBP8.27□□□□□ -1.09
RAB3B-201ENST00000371655 BECN1Q14457 450 aa8.27□□□□□ -1.09
RAB3B-201ENST00000371655 C9orf84Q5VXU9 1444 aa8.26□□□□□ -1.09
RAB3B-201ENST00000371655 IRX6P78412 446 aaPredicted RBP8.26□□□□□ -1.09
RAB3B-201ENST00000371655 EID1Q9Y6B2 187 aa8.26□□□□□ -1.09
RAB3B-201ENST00000371655 CHMP4AQ9BY43 222 aa8.26□□□□□ -1.09
RAB3B-201ENST00000371655 ZNF644Q9H582 1327 aaPredicted RBP8.26□□□□□ -1.09
RAB3B-201ENST00000371655 NGEFQ8N5V2 710 aa8.26□□□□□ -1.09
RAB3B-201ENST00000371655 URB2Q14146 1524 aaKnown RBP8.26□□□□□ -1.09
RAB3B-201ENST00000371655 MYBBP1AQ9BQG0 1328 aaKnown RBP8.25□□□□□ -1.09
RAB3B-201ENST00000371655 PRDM2Q13029 1718 aa8.25□□□□□ -1.09
RAB3B-201ENST00000371655 ARHGAP5Q13017 1502 aa8.25□□□□□ -1.09
RAB3B-201ENST00000371655 SUPT6HQ7KZ85 1726 aaKnown RBP8.24□□□□□ -1.09
RAB3B-201ENST00000371655 U2SURPO15042 1029 aaKnown RBP8.24□□□□□ -1.09
RAB3B-201ENST00000371655 BCL11AQ9H165 835 aa8.24□□□□□ -1.09
RAB3B-201ENST00000371655 ANP32BQ92688 251 aaKnown RBP8.24□□□□□ -1.09
RAB3B-201ENST00000371655 ANP32EQ9BTT0 268 aa8.24□□□□□ -1.09
RAB3B-201ENST00000371655 KIAA1107Q9UPP5 1409 aa8.23□□□□□ -1.09
RAB3B-201ENST00000371655 IPO8O15397 1037 aaKnown RBP8.23□□□□□ -1.09
RAB3B-201ENST00000371655 PRKRIP1Q9H875 184 aaPredicted RBP8.23□□□□□ -1.09
RAB3B-201ENST00000371655 TNNT2P45379 298 aaPredicted RBP8.22□□□□□ -1.09
RAB3B-201ENST00000371655 NEUROD2Q15784 382 aa8.22□□□□□ -1.09
RAB3B-201ENST00000371655 SENP3Q9H4L4 574 aaPredicted RBP8.22□□□□□ -1.09
RAB3B-201ENST00000371655 STK26Q9P289 416 aa8.22□□□□□ -1.09
RAB3B-201ENST00000371655 EVC2Q86UK5 1308 aa8.22□□□□□ -1.09
RAB3B-201ENST00000371655 CCDC7Q96M83 1385 aa8.21□□□□□ -1.09
RAB3B-201ENST00000371655 U2AF1L5P0DN76 240 aaPredicted RBP8.21□□□□□ -1.09
RAB3B-201ENST00000371655 U2AF1Q01081 240 aaKnown RBP eCLIP8.21□□□□□ -1.09
RAB3B-201ENST00000371655 AKNAQ7Z591 1439 aa8.21□□□□□ -1.09
RAB3B-201ENST00000371655 LMOD3Q0VAK6 560 aa8.21□□□□□ -1.09
RAB3B-201ENST00000371655 RCAN3Q9UKA8 241 aa8.21□□□□□ -1.09
RAB3B-201ENST00000371655 ZBED9Q6R2W3 1325 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms