RNA–Protein interactions for RNA: ENST00000370203.8

TMEM56-201, Transcript of transmembrane protein 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM56, Length 6,822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-201ENST00000370203 DRC7Q8IY82 874 aa16.05■□□□□ 0.16
TMEM56-201ENST00000370203 NOL8Q76FK4 1167 aaKnown RBP16.04■□□□□ 0.16
TMEM56-201ENST00000370203 KANK1Q14678 1352 aa16.04■□□□□ 0.16
TMEM56-201ENST00000370203 KIF27Q86VH2 1401 aa16.03■□□□□ 0.16
TMEM56-201ENST00000370203 CCDC146Q8IYE0 955 aa16.03■□□□□ 0.16
TMEM56-201ENST00000370203 HSPA5P11021 654 aaKnown RBP16.02■□□□□ 0.15
TMEM56-201ENST00000370203 PKD2Q13563 968 aa16.02■□□□□ 0.15
TMEM56-201ENST00000370203 ITPRIPQ8IWB1 547 aa16.02■□□□□ 0.15
TMEM56-201ENST00000370203 FOXD4L1Q9NU39 408 aa16.02■□□□□ 0.15
TMEM56-201ENST00000370203 U2AF1L5P0DN76 240 aaPredicted RBP16.01■□□□□ 0.15
TMEM56-201ENST00000370203 U2AF1Q01081 240 aaKnown RBP eCLIP16.01■□□□□ 0.15
TMEM56-201ENST00000370203 PPP4R2Q9NY27 417 aa16.01■□□□□ 0.15
TMEM56-201ENST00000370203 GZF1Q9H116 711 aaPredicted RBP16.01■□□□□ 0.15
TMEM56-201ENST00000370203 HSCBQ8IWL3 235 aa16.01■□□□□ 0.15
TMEM56-201ENST00000370203 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16■□□□□ 0.152e-8■■■□□ 15.4
TMEM56-201ENST00000370203 NOP58Q9Y2X3 529 aaKnown RBP16■□□□□ 0.15
TMEM56-201ENST00000370203 RB1CC1Q8TDY2 1594 aa15.98■□□□□ 0.15
TMEM56-201ENST00000370203 SLC4A10Q6U841 1118 aa15.98■□□□□ 0.15
TMEM56-201ENST00000370203 HDGFL2Q7Z4V5 671 aaPredicted RBP15.98■□□□□ 0.15
TMEM56-201ENST00000370203 HSP90B1P14625 803 aaKnown RBP15.97■□□□□ 0.15
TMEM56-201ENST00000370203 PNNQ9H307 717 aaKnown RBP15.96■□□□□ 0.15
TMEM56-201ENST00000370203 CREBRFQ8IUR6 639 aa15.96■□□□□ 0.15
TMEM56-201ENST00000370203 GOLGA6L6A8MZA4 724 aa15.96■□□□□ 0.14
TMEM56-201ENST00000370203 HDGFP51858 240 aaKnown RBP15.95■□□□□ 0.14
TMEM56-201ENST00000370203 CLUAP1Q96AJ1 413 aa15.95■□□□□ 0.14
TMEM56-201ENST00000370203 FOXD4L5Q5VV16 416 aaPredicted RBP15.94■□□□□ 0.14
TMEM56-201ENST00000370203 FOXD4L4Q8WXT5 416 aaPredicted RBP15.94■□□□□ 0.14
TMEM56-201ENST00000370203 PRM3Q9NNZ6 103 aa15.94■□□□□ 0.14
TMEM56-201ENST00000370203 HNRNPMP52272 730 aaKnown RBP eCLIP15.94■□□□□ 0.14
TMEM56-201ENST00000370203 GORABQ5T7V8 394 aa15.94■□□□□ 0.14
TMEM56-201ENST00000370203 G3V3G9 751 aa15.94■□□□□ 0.14
TMEM56-201ENST00000370203 DCAF8Q5TAQ9 597 aa15.94■□□□□ 0.14
TMEM56-201ENST00000370203 ANP32EQ9BTT0 268 aa15.94■□□□□ 0.14
TMEM56-201ENST00000370203 SLKQ9H2G2 1235 aaPredicted RBP15.94■□□□□ 0.14
TMEM56-201ENST00000370203 TAF7LQ5H9L4 462 aa15.93■□□□□ 0.14
TMEM56-201ENST00000370203 CUX2O14529 1486 aa15.93■□□□□ 0.14
TMEM56-201ENST00000370203 KANK4Q5T7N3 995 aaPredicted RBP15.93■□□□□ 0.14
TMEM56-201ENST00000370203 ROCK2O75116 1388 aaKnown RBP15.92■□□□□ 0.14
TMEM56-201ENST00000370203 MCCP23508 829 aa15.92■□□□□ 0.14
TMEM56-201ENST00000370203 MSH5O43196 834 aa15.92■□□□□ 0.14
TMEM56-201ENST00000370203 TRIM6-TRIM34B2RNG4 842 aa15.92■□□□□ 0.14
TMEM56-201ENST00000370203 NGEFQ8N5V2 710 aa15.91■□□□□ 0.14
TMEM56-201ENST00000370203 RRP7AQ9Y3A4 280 aaKnown RBP15.91■□□□□ 0.14
TMEM56-201ENST00000370203 SOGA1O94964 1423 aa15.91■□□□□ 0.14
TMEM56-201ENST00000370203 KIAA1211Q6ZU35 1233 aa15.9■□□□□ 0.14
TMEM56-201ENST00000370203 KIF3BO15066 747 aa15.9■□□□□ 0.14
TMEM56-201ENST00000370203 MFAP1P55081 439 aaKnown RBP15.9■□□□□ 0.14
TMEM56-201ENST00000370203 NGDNQ8NEJ9 315 aaKnown RBP15.89■□□□□ 0.13
TMEM56-201ENST00000370203 EEA1Q15075 1411 aa15.89■□□□□ 0.13
TMEM56-201ENST00000370203 CEP164Q9UPV0 1460 aa15.89■□□□□ 0.13
TMEM56-201ENST00000370203 CARMIL1Q5VZK9 1371 aa15.89■□□□□ 0.13
TMEM56-201ENST00000370203 TOMM22Q9NS69 142 aa15.88■□□□□ 0.13
TMEM56-201ENST00000370203 TMX4Q9H1E5 349 aaPredicted RBP15.88■□□□□ 0.13
TMEM56-201ENST00000370203 VPS53Q5VIR6 699 aa15.88■□□□□ 0.13
TMEM56-201ENST00000370203 MS4A1P11836 297 aa15.88■□□□□ 0.13
TMEM56-201ENST00000370203 ELL2O00472 640 aaPredicted RBP15.87■□□□□ 0.13
TMEM56-201ENST00000370203 WWC1Q8IX03 1113 aa15.87■□□□□ 0.13
TMEM56-201ENST00000370203 CHMP4BQ9H444 224 aaKnown RBP15.87■□□□□ 0.13
TMEM56-201ENST00000370203 FRAT2O75474 233 aaPredicted RBP15.86■□□□□ 0.13
TMEM56-201ENST00000370203 TRAK1Q9UPV9 953 aa15.85■□□□□ 0.13
TMEM56-201ENST00000370203 KTN1Q86UP2 1357 aaKnown RBP15.85■□□□□ 0.13
TMEM56-201ENST00000370203 RAD21O60216 631 aa15.85■□□□□ 0.13
TMEM56-201ENST00000370203 TNIKQ9UKE5 1360 aa15.84■□□□□ 0.13
TMEM56-201ENST00000370203 AMPHP49418 695 aa15.84■□□□□ 0.13
TMEM56-201ENST00000370203 NECTIN2Q92692 538 aa15.84■□□□□ 0.13
TMEM56-201ENST00000370203 KLHL34Q8N239 644 aa15.84■□□□□ 0.13
TMEM56-201ENST00000370203 SMC4Q9NTJ3 1288 aa15.84■□□□□ 0.13
TMEM56-201ENST00000370203 FOXD4L6Q3SYB3 417 aaPredicted RBP15.84■□□□□ 0.13
TMEM56-201ENST00000370203 FOXD4L3Q6VB84 417 aaPredicted RBP15.84■□□□□ 0.13
TMEM56-201ENST00000370203 GTF2E1P29083 439 aaPredicted RBP15.83■□□□□ 0.13
TMEM56-201ENST00000370203 NUP155O75694 1391 aa15.83■□□□□ 0.13
TMEM56-201ENST00000370203 TDRD9Q8NDG6 1382 aaKnown RBP15.83■□□□□ 0.12
TMEM56-201ENST00000370203 MSNP26038 577 aaKnown RBP15.83■□□□□ 0.12
TMEM56-201ENST00000370203 CECR2Q9BXF3 1484 aa15.82■□□□□ 0.12
TMEM56-201ENST00000370203 BCL2L13Q9BXK5 485 aa15.82■□□□□ 0.12
TMEM56-201ENST00000370203 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.81■□□□□ 0.12
TMEM56-201ENST00000370203 RASSF8Q8NHQ8 419 aa15.81■□□□□ 0.12
TMEM56-201ENST00000370203 MPHOSPH9Q99550 1183 aa15.81■□□□□ 0.12
TMEM56-201ENST00000370203 FBXO3Q9UK99 471 aa15.81■□□□□ 0.12
TMEM56-201ENST00000370203 STK31Q9BXU1 1019 aa15.8■□□□□ 0.12
TMEM56-201ENST00000370203 ABCC8Q09428 1581 aa15.8■□□□□ 0.12
TMEM56-201ENST00000370203 NOC3LQ8WTT2 800 aaKnown RBP15.8■□□□□ 0.12
TMEM56-201ENST00000370203 RCAN3Q9UKA8 241 aa15.8■□□□□ 0.12
TMEM56-201ENST00000370203 WASHC2CQ9Y4E1 1318 aa15.79■□□□□ 0.12
TMEM56-201ENST00000370203 NRDCO43847 1150 aa15.79■□□□□ 0.12
TMEM56-201ENST00000370203 SYTL4Q96C24 671 aaPredicted RBP15.79■□□□□ 0.12
TMEM56-201ENST00000370203 IPO8O15397 1037 aaKnown RBP15.78■□□□□ 0.12
TMEM56-201ENST00000370203 CHAF1AQ13111 956 aaPredicted RBP15.78■□□□□ 0.12
TMEM56-201ENST00000370203 SPAG9O60271 1321 aaKnown RBP15.78■□□□□ 0.12
TMEM56-201ENST00000370203 ARHGAP35Q9NRY4 1499 aa15.78■□□□□ 0.12
TMEM56-201ENST00000370203 FBXW7Q969H0 707 aa15.77■□□□□ 0.12
TMEM56-201ENST00000370203 DEKP35659 375 aaKnown RBP15.77■□□□□ 0.12
TMEM56-201ENST00000370203 EID1Q9Y6B2 187 aa15.77■□□□□ 0.12
TMEM56-201ENST00000370203 EVA1CP58658 441 aa15.77■□□□□ 0.11
TMEM56-201ENST00000370203 TCERG1O14776 1098 aaKnown RBP15.77■□□□□ 0.11
TMEM56-201ENST00000370203 SETD5Q9C0A6 1442 aa15.76■□□□□ 0.11
TMEM56-201ENST00000370203 SAMD1Q6SPF0 538 aaPredicted RBP15.74■□□□□ 0.11
TMEM56-201ENST00000370203 KIAA2012Q0VF49 1180 aa15.74■□□□□ 0.11
TMEM56-201ENST00000370203 PLIN1O60240 522 aa15.74■□□□□ 0.11
TMEM56-201ENST00000370203 RBM19Q9Y4C8 960 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms