RNA–Protein interactions for RNA: ENST00000369774.8

SH3PXD2A-203, Transcript of SH3 and PX domains 2A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SH3PXD2A, Length 11,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-203ENST00000369774 PRM3Q9NNZ6 103 aa16.58■□□□□ 0.25
SH3PXD2A-203ENST00000369774 EIF4G1Q04637 1599 aaKnown RBP16.58■□□□□ 0.24
SH3PXD2A-203ENST00000369774 TMX4Q9H1E5 349 aaPredicted RBP16.57■□□□□ 0.24
SH3PXD2A-203ENST00000369774 NOC3LQ8WTT2 800 aaKnown RBP16.57■□□□□ 0.24
SH3PXD2A-203ENST00000369774 RB1CC1Q8TDY2 1594 aa16.57■□□□□ 0.24
SH3PXD2A-203ENST00000369774 KIF27Q86VH2 1401 aa16.56■□□□□ 0.24
SH3PXD2A-203ENST00000369774 CSB-PGBD3P0DP91 1061 aa16.56■□□□□ 0.24
SH3PXD2A-203ENST00000369774 CCNB3Q8WWL7 1395 aa16.56■□□□□ 0.24
SH3PXD2A-203ENST00000369774 AMER1Q5JTC6 1135 aaPredicted RBP16.53■□□□□ 0.24
SH3PXD2A-203ENST00000369774 CFAP44Q96MT7 982 aa16.53■□□□□ 0.24
SH3PXD2A-203ENST00000369774 EEA1Q15075 1411 aa16.52■□□□□ 0.24
SH3PXD2A-203ENST00000369774 HDGFL2Q7Z4V5 671 aaPredicted RBP16.52■□□□□ 0.24
SH3PXD2A-203ENST00000369774 BAZ1BQ9UIG0 1483 aaKnown RBP16.52■□□□□ 0.23
SH3PXD2A-203ENST00000369774 CHMP3Q9Y3E7 222 aa16.51■□□□□ 0.23
SH3PXD2A-203ENST00000369774 CCDC9Q9Y3X0 531 aaKnown RBP16.51■□□□□ 0.23
SH3PXD2A-203ENST00000369774 IPO8O15397 1037 aaKnown RBP16.5■□□□□ 0.23
SH3PXD2A-203ENST00000369774 GGT6Q6P531 493 aa16.5■□□□□ 0.23
SH3PXD2A-203ENST00000369774 GORABQ5T7V8 394 aa16.5■□□□□ 0.23
SH3PXD2A-203ENST00000369774 TAF7LQ5H9L4 462 aa16.5■□□□□ 0.23
SH3PXD2A-203ENST00000369774 PDE4CQ08493 712 aa16.48■□□□□ 0.23
SH3PXD2A-203ENST00000369774 CCDC180Q9P1Z9 1646 aa16.48■□□□□ 0.23
SH3PXD2A-203ENST00000369774 G3V3G9 751 aa16.47■□□□□ 0.23
SH3PXD2A-203ENST00000369774 DCAF8Q5TAQ9 597 aa16.47■□□□□ 0.23
SH3PXD2A-203ENST00000369774 WRNQ14191 1432 aaPredicted RBP eCLIP16.47■□□□□ 0.23
SH3PXD2A-203ENST00000369774 ITPRIPQ8IWB1 547 aa16.46■□□□□ 0.23
SH3PXD2A-203ENST00000369774 CALD1Q05682 793 aaKnown RBP16.45■□□□□ 0.22
SH3PXD2A-203ENST00000369774 GPATCH3Q96I76 525 aa16.45■□□□□ 0.22
SH3PXD2A-203ENST00000369774 CEP164Q9UPV0 1460 aa16.45■□□□□ 0.22
SH3PXD2A-203ENST00000369774 U2AF1L5P0DN76 240 aaPredicted RBP16.44■□□□□ 0.22
SH3PXD2A-203ENST00000369774 U2AF1Q01081 240 aaKnown RBP eCLIP16.44■□□□□ 0.22
SH3PXD2A-203ENST00000369774 GBP4Q96PP9 640 aa16.43■□□□□ 0.22
SH3PXD2A-203ENST00000369774 HSP90B1P14625 803 aaKnown RBP16.43■□□□□ 0.22
SH3PXD2A-203ENST00000369774 HTATSF1O43719 755 aaKnown RBP16.43■□□□□ 0.22
SH3PXD2A-203ENST00000369774 TRIM6-TRIM34B2RNG4 842 aa16.42■□□□□ 0.22
SH3PXD2A-203ENST00000369774 TPM4P67936 248 aa16.42■□□□□ 0.22
SH3PXD2A-203ENST00000369774 GZF1Q9H116 711 aaPredicted RBP16.41■□□□□ 0.22
SH3PXD2A-203ENST00000369774 KTN1Q86UP2 1357 aaKnown RBP16.41■□□□□ 0.22
SH3PXD2A-203ENST00000369774 CREBRFQ8IUR6 639 aa16.41■□□□□ 0.22
SH3PXD2A-203ENST00000369774 ARID3AQ99856 593 aa16.4■□□□□ 0.22
SH3PXD2A-203ENST00000369774 RASSF8Q8NHQ8 419 aa16.4■□□□□ 0.22
SH3PXD2A-203ENST00000369774 SPAG9O60271 1321 aaKnown RBP16.4■□□□□ 0.22
SH3PXD2A-203ENST00000369774 STK31Q9BXU1 1019 aa16.39■□□□□ 0.21
SH3PXD2A-203ENST00000369774 FHAD1B1AJZ9 1412 aa16.39■□□□□ 0.21
SH3PXD2A-203ENST00000369774 A0A0U1RQG5 324 aaPredicted RBP16.39■□□□□ 0.21
SH3PXD2A-203ENST00000369774 PTMSP20962 102 aa16.38■□□□□ 0.21
SH3PXD2A-203ENST00000369774 VPS53Q5VIR6 699 aa16.37■□□□□ 0.21
SH3PXD2A-203ENST00000369774 CCDC34Q96HJ3 373 aa16.37■□□□□ 0.21
SH3PXD2A-203ENST00000369774 RWDD1Q9H446 243 aaPredicted RBP16.37■□□□□ 0.21
SH3PXD2A-203ENST00000369774 SYAP1Q96A49 352 aaPredicted RBP16.37■□□□□ 0.21
SH3PXD2A-203ENST00000369774 ROCK2O75116 1388 aaKnown RBP16.36■□□□□ 0.21
SH3PXD2A-203ENST00000369774 FOXD1Q16676 465 aa16.36■□□□□ 0.21
SH3PXD2A-203ENST00000369774 SLKQ9H2G2 1235 aaPredicted RBP16.36■□□□□ 0.21
SH3PXD2A-203ENST00000369774 MYO15BQ96JP2 1530 aa16.36■□□□□ 0.21
SH3PXD2A-203ENST00000369774 FRAT2O75474 233 aaPredicted RBP16.35■□□□□ 0.21
SH3PXD2A-203ENST00000369774 SLC4A10Q6U841 1118 aa16.35■□□□□ 0.21
SH3PXD2A-203ENST00000369774 ANO8Q9HCE9 1232 aaPredicted RBP16.35■□□□□ 0.21
SH3PXD2A-203ENST00000369774 DEKP35659 375 aaKnown RBP16.34■□□□□ 0.21
SH3PXD2A-203ENST00000369774 TNIKQ9UKE5 1360 aa16.34■□□□□ 0.21
SH3PXD2A-203ENST00000369774 PKD2Q13563 968 aa16.34■□□□□ 0.21
SH3PXD2A-203ENST00000369774 RCAN3Q9UKA8 241 aa16.34■□□□□ 0.21
SH3PXD2A-203ENST00000369774 CHMP4AQ9BY43 222 aa16.34■□□□□ 0.21
SH3PXD2A-203ENST00000369774 GTF2E1P29083 439 aaPredicted RBP16.34■□□□□ 0.21
SH3PXD2A-203ENST00000369774 HSPA5P11021 654 aaKnown RBP16.33■□□□□ 0.21
SH3PXD2A-203ENST00000369774 MARCH6O60337 910 aa16.33■□□□□ 0.2
SH3PXD2A-203ENST00000369774 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.33■□□□□ 0.2
SH3PXD2A-203ENST00000369774 LTV1Q96GA3 475 aaPredicted RBP16.32■□□□□ 0.2
SH3PXD2A-203ENST00000369774 MFAP1P55081 439 aaKnown RBP16.32■□□□□ 0.2
SH3PXD2A-203ENST00000369774 TOMM22Q9NS69 142 aa16.32■□□□□ 0.2
SH3PXD2A-203ENST00000369774 SMC4Q9NTJ3 1288 aa16.32■□□□□ 0.2
SH3PXD2A-203ENST00000369774 NOL8Q76FK4 1167 aaKnown RBP16.32■□□□□ 0.2
SH3PXD2A-203ENST00000369774 CEP89Q96ST8 783 aa16.31■□□□□ 0.2
SH3PXD2A-203ENST00000369774 GOLGA6L1Q8N7Z2 621 aa16.31■□□□□ 0.2
SH3PXD2A-203ENST00000369774 NGDNQ8NEJ9 315 aaKnown RBP16.3■□□□□ 0.2
SH3PXD2A-203ENST00000369774 HMMRO75330 724 aa16.3■□□□□ 0.2
SH3PXD2A-203ENST00000369774 PMFBP1Q8TBY8 1022 aa16.3■□□□□ 0.2
SH3PXD2A-203ENST00000369774 HDAC5Q9UQL6 1122 aa16.3■□□□□ 0.2
SH3PXD2A-203ENST00000369774 CSPP1Q1MSJ5 1256 aa16.29■□□□□ 0.2
SH3PXD2A-203ENST00000369774 ARHGAP35Q9NRY4 1499 aa16.29■□□□□ 0.2
SH3PXD2A-203ENST00000369774 EID1Q9Y6B2 187 aa16.29■□□□□ 0.2
SH3PXD2A-203ENST00000369774 AMPHP49418 695 aa16.28■□□□□ 0.2
SH3PXD2A-203ENST00000369774 FOXD4L1Q9NU39 408 aa16.28■□□□□ 0.2
SH3PXD2A-203ENST00000369774 CCER2I3L3R5 266 aa16.26■□□□□ 0.19
SH3PXD2A-203ENST00000369774 CARMIL1Q5VZK9 1371 aa16.26■□□□□ 0.19
SH3PXD2A-203ENST00000369774 CUX2O14529 1486 aa16.26■□□□□ 0.19
SH3PXD2A-203ENST00000369774 PES1O00541 588 aaKnown RBP16.26■□□□□ 0.19
SH3PXD2A-203ENST00000369774 NUTM2DQ5VT03 806 aaPredicted RBP16.26■□□□□ 0.19
SH3PXD2A-203ENST00000369774 SETD5Q9C0A6 1442 aa16.26■□□□□ 0.19
SH3PXD2A-203ENST00000369774 SF3A1Q15459 793 aaKnown RBP16.26■□□□□ 0.19
SH3PXD2A-203ENST00000369774 CCDC146Q8IYE0 955 aa16.26■□□□□ 0.19
SH3PXD2A-203ENST00000369774 EIF3AQ14152 1382 aaKnown RBP16.25■□□□□ 0.19
SH3PXD2A-203ENST00000369774 TERF2IPQ9NYB0 399 aa16.25■□□□□ 0.19
SH3PXD2A-203ENST00000369774 NUTM2FA1L443 756 aa16.25■□□□□ 0.19
SH3PXD2A-203ENST00000369774 RALBP1Q15311 655 aa16.25■□□□□ 0.19
SH3PXD2A-203ENST00000369774 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.24■□□□□ 0.196e-8■□□□□ 8.8
SH3PXD2A-203ENST00000369774 FOXD4L5Q5VV16 416 aaPredicted RBP16.24■□□□□ 0.19
SH3PXD2A-203ENST00000369774 FOXD4L4Q8WXT5 416 aaPredicted RBP16.24■□□□□ 0.19
SH3PXD2A-203ENST00000369774 KIF16BQ96L93 1317 aa16.24■□□□□ 0.19
SH3PXD2A-203ENST00000369774 TNNT3P45378 269 aaPredicted RBP16.23■□□□□ 0.19
SH3PXD2A-203ENST00000369774 TPM3P06753 285 aa16.23■□□□□ 0.19
SH3PXD2A-203ENST00000369774 TPD52L1Q16890 204 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms