RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 PPP4R2Q9NY27 417 aa14.9□□□□□ -0.02
LRIF1-201ENST00000369763 EHBP1L1Q8N3D4 1523 aa14.9□□□□□ -0.02
LRIF1-201ENST00000369763 BCL11AQ9H165 835 aa14.89□□□□□ -0.03
LRIF1-201ENST00000369763 UGGT2Q9NYU1 1516 aa14.89□□□□□ -0.03
LRIF1-201ENST00000369763 CFDP1Q9UEE9 299 aaPredicted RBP14.89□□□□□ -0.03
LRIF1-201ENST00000369763 EPRSP07814 1512 aaKnown RBP14.88□□□□□ -0.03
LRIF1-201ENST00000369763 PKD2Q13563 968 aa14.86□□□□□ -0.03
LRIF1-201ENST00000369763 SAMD9Q5K651 1589 aa14.86□□□□□ -0.03
LRIF1-201ENST00000369763 THOC2Q8NI27 1593 aaKnown RBP14.86□□□□□ -0.03
LRIF1-201ENST00000369763 ANKRD30BQ9BXX2 1392 aa14.84□□□□□ -0.03
LRIF1-201ENST00000369763 NBR1Q14596 966 aa14.83□□□□□ -0.04
LRIF1-201ENST00000369763 LAMC3Q9Y6N6 1575 aa14.83□□□□□ -0.04
LRIF1-201ENST00000369763 AKNAQ7Z591 1439 aa14.83□□□□□ -0.04
LRIF1-201ENST00000369763 NCOA1Q15788 1441 aa14.82□□□□□ -0.04
LRIF1-201ENST00000369763 ZBED9Q6R2W3 1325 aa14.81□□□□□ -0.04
LRIF1-201ENST00000369763 TMC1Q8TDI8 760 aa14.81□□□□□ -0.04
LRIF1-201ENST00000369763 ABCA5Q8WWZ7 1642 aa14.81□□□□□ -0.04
LRIF1-201ENST00000369763 ABCC5O15440 1437 aa14.81□□□□□ -0.04
LRIF1-201ENST00000369763 DAPK1P53355 1430 aa14.81□□□□□ -0.04
LRIF1-201ENST00000369763 PRG4Q92954 1404 aaPredicted RBP14.8□□□□□ -0.04
LRIF1-201ENST00000369763 CCDC136Q96JN2 1154 aa14.8□□□□□ -0.04
LRIF1-201ENST00000369763 CARD11Q9BXL7 1154 aa14.79□□□□□ -0.04
LRIF1-201ENST00000369763 CHMP7Q8WUX9 453 aaPredicted RBP14.79□□□□□ -0.04
LRIF1-201ENST00000369763 ZNF608Q9ULD9 1512 aaPredicted RBP14.79□□□□□ -0.04
LRIF1-201ENST00000369763 RGL3Q3MIN7 710 aa14.78□□□□□ -0.04
LRIF1-201ENST00000369763 USP47Q96K76 1375 aa14.77□□□□□ -0.04
LRIF1-201ENST00000369763 DCAF11Q8TEB1 546 aa14.76□□□□□ -0.05
LRIF1-201ENST00000369763 TCOF1Q13428 1488 aaKnown RBP14.76□□□□□ -0.05
LRIF1-201ENST00000369763 IQGAP2Q13576 1575 aa14.76□□□□□ -0.05
LRIF1-201ENST00000369763 HECW1Q76N89 1606 aa14.76□□□□□ -0.05
LRIF1-201ENST00000369763 ARHGEF11O15085 1522 aa14.76□□□□□ -0.05
LRIF1-201ENST00000369763 FANCIQ9NVI1 1328 aa14.76□□□□□ -0.05
LRIF1-201ENST00000369763 RPRD2Q5VT52 1461 aaKnown RBP14.76□□□□□ -0.05
LRIF1-201ENST00000369763 ST20-MTHFSA0A0A6YYL1 179 aa14.75□□□□□ -0.05
LRIF1-201ENST00000369763 MIA2Q96PC5 1412 aa14.75□□□□□ -0.05
LRIF1-201ENST00000369763 NPM2Q86SE8 214 aaKnown RBP14.74□□□□□ -0.05
LRIF1-201ENST00000369763 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.74□□□□□ -0.053e-9■□□□□ 9.1
LRIF1-201ENST00000369763 KIF21AQ7Z4S6 1674 aa14.74□□□□□ -0.05
LRIF1-201ENST00000369763 PAK3O75914 559 aaPredicted RBP14.73□□□□□ -0.05
LRIF1-201ENST00000369763 NUP155O75694 1391 aa14.73□□□□□ -0.05
LRIF1-201ENST00000369763 HNRNPMP52272 730 aaKnown RBP eCLIP14.73□□□□□ -0.05
LRIF1-201ENST00000369763 TEX14Q8IWB6 1497 aa14.72□□□□□ -0.05
LRIF1-201ENST00000369763 NUDCQ9Y266 331 aa14.71□□□□□ -0.05
LRIF1-201ENST00000369763 PLB1Q6P1J6 1458 aa14.71□□□□□ -0.06
LRIF1-201ENST00000369763 SPATA31E1Q6ZUB1 1445 aa14.7□□□□□ -0.06
LRIF1-201ENST00000369763 NUP153P49790 1475 aaKnown RBP14.7□□□□□ -0.06
LRIF1-201ENST00000369763 WDR62O43379 1518 aa14.7□□□□□ -0.06
LRIF1-201ENST00000369763 TARBP1Q13395 1621 aaKnown RBP14.68□□□□□ -0.06
LRIF1-201ENST00000369763 GCC2Q8IWJ2 1684 aa14.68□□□□□ -0.06
LRIF1-201ENST00000369763 DHX29Q7Z478 1369 aaKnown RBP14.68□□□□□ -0.06
LRIF1-201ENST00000369763 TSPY4P0CV99 314 aa14.68□□□□□ -0.06
LRIF1-201ENST00000369763 TSPY10P0CW01 314 aa14.68□□□□□ -0.06
LRIF1-201ENST00000369763 CC2D1BQ5T0F9 858 aaKnown RBP14.68□□□□□ -0.06
LRIF1-201ENST00000369763 PLEKHD1A6NEE1 506 aa14.67□□□□□ -0.06
LRIF1-201ENST00000369763 PNISRQ8TF01 805 aaKnown RBP14.67□□□□□ -0.06
LRIF1-201ENST00000369763 ERICH6BQ5W0A0 696 aa14.67□□□□□ -0.06
LRIF1-201ENST00000369763 ROCK1Q13464 1354 aa14.67□□□□□ -0.06
LRIF1-201ENST00000369763 SKAP1Q86WV1 359 aa14.66□□□□□ -0.06
LRIF1-201ENST00000369763 PZPP20742 1482 aa14.66□□□□□ -0.06
LRIF1-201ENST00000369763 JPH4Q96JJ6 628 aa14.65□□□□□ -0.06
LRIF1-201ENST00000369763 NOP58Q9Y2X3 529 aaKnown RBP14.65□□□□□ -0.06
LRIF1-201ENST00000369763 DISP1Q96F81 1524 aa14.64□□□□□ -0.07
LRIF1-201ENST00000369763 CAMSAP2Q08AD1 1489 aa14.64□□□□□ -0.07
LRIF1-201ENST00000369763 PLIN1O60240 522 aa14.64□□□□□ -0.07
LRIF1-201ENST00000369763 EXOC6Q8TAG9 804 aa14.64□□□□□ -0.07
LRIF1-201ENST00000369763 ANKRD50Q9ULJ7 1429 aa14.64□□□□□ -0.07
LRIF1-201ENST00000369763 ANKRD30AQ9BXX3 1397 aa14.63□□□□□ -0.07
LRIF1-201ENST00000369763 NBPF1Q3BBV0 1214 aa14.63□□□□□ -0.07
LRIF1-201ENST00000369763 KIAA1107Q9UPP5 1409 aa14.63□□□□□ -0.07
LRIF1-201ENST00000369763 CDCA7LQ96GN5 454 aa14.63□□□□□ -0.07
LRIF1-201ENST00000369763 ADAMTS12P58397 1594 aa14.63□□□□□ -0.07
LRIF1-201ENST00000369763 DEKP35659 375 aaKnown RBP14.62□□□□□ -0.07
LRIF1-201ENST00000369763 ANP32AP39687 249 aaKnown RBP14.61□□□□□ -0.07
LRIF1-201ENST00000369763 TROQ12816 1431 aaPredicted RBP14.61□□□□□ -0.07
LRIF1-201ENST00000369763 PBRM1Q86U86 1689 aa14.6□□□□□ -0.07
LRIF1-201ENST00000369763 ROCK2O75116 1388 aaKnown RBP14.6□□□□□ -0.07
LRIF1-201ENST00000369763 GPATCH8Q9UKJ3 1502 aaKnown RBP14.6□□□□□ -0.07
LRIF1-201ENST00000369763 KIAA0586Q9BVV6 1533 aa14.6□□□□□ -0.07
LRIF1-201ENST00000369763 SMG6Q86US8 1419 aaKnown RBP14.6□□□□□ -0.07
LRIF1-201ENST00000369763 DNMT1P26358 1616 aaKnown RBP14.59□□□□□ -0.07
LRIF1-201ENST00000369763 MRC2Q9UBG0 1479 aa14.59□□□□□ -0.07
LRIF1-201ENST00000369763 BCORL1Q5H9F3 1711 aa14.58□□□□□ -0.08
LRIF1-201ENST00000369763 KIAA0556O60303 1618 aa14.57□□□□□ -0.08
LRIF1-201ENST00000369763 ZBTB47Q9UFB7 747 aaPredicted RBP14.57□□□□□ -0.08
LRIF1-201ENST00000369763 RCAN3Q9UKA8 241 aa14.56□□□□□ -0.08
LRIF1-201ENST00000369763 KIF14Q15058 1648 aa14.56□□□□□ -0.08
LRIF1-201ENST00000369763 LAS1LQ9Y4W2 734 aaKnown RBP14.56□□□□□ -0.08
LRIF1-201ENST00000369763 GRIN2AQ12879 1464 aa14.55□□□□□ -0.08
LRIF1-201ENST00000369763 MYBBP1AQ9BQG0 1328 aaKnown RBP14.55□□□□□ -0.08
LRIF1-201ENST00000369763 KIF15Q9NS87 1388 aa14.54□□□□□ -0.08
LRIF1-201ENST00000369763 RRP1P56182 461 aaKnown RBP14.54□□□□□ -0.08
LRIF1-201ENST00000369763 RAPGEF6Q8TEU7 1601 aa14.54□□□□□ -0.08
LRIF1-201ENST00000369763 C9orf84Q5VXU9 1444 aa14.53□□□□□ -0.08
LRIF1-201ENST00000369763 ERCC6Q03468 1493 aa14.53□□□□□ -0.08
LRIF1-201ENST00000369763 IPO9Q96P70 1041 aaKnown RBP14.52□□□□□ -0.08
LRIF1-201ENST00000369763 PANK3Q9H999 370 aa14.51□□□□□ -0.09
LRIF1-201ENST00000369763 RTL5Q5HYW3 569 aaPredicted RBP14.51□□□□□ -0.09
LRIF1-201ENST00000369763 IFT140Q96RY7 1462 aa14.51□□□□□ -0.09
LRIF1-201ENST00000369763 RALBP1Q15311 655 aa14.5□□□□□ -0.09
LRIF1-201ENST00000369763 NLRP13Q86W25 1043 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms