RNA–Protein interactions for RNA: ENST00000369486.7

IGSF3-203, Transcript of immunoglobulin superfamily member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene IGSF3, Length 7,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGSF3-203ENST00000369486 NUTM2FA1L443 756 aa15.4■□□□□ 0.06
IGSF3-203ENST00000369486 SMARCA4P51532 1647 aa15.39■□□□□ 0.05
IGSF3-203ENST00000369486 RUSC2Q8N2Y8 1516 aa15.39■□□□□ 0.05
IGSF3-203ENST00000369486 FMN1Q68DA7 1419 aa15.38■□□□□ 0.05
IGSF3-203ENST00000369486 ATAD2BQ9ULI0 1458 aa15.38■□□□□ 0.05
IGSF3-203ENST00000369486 NCLP19338 710 aaKnown RBP15.38■□□□□ 0.05
IGSF3-203ENST00000369486 JPH4Q96JJ6 628 aa15.38■□□□□ 0.05
IGSF3-203ENST00000369486 B4GALNT3Q6L9W6 998 aa15.38■□□□□ 0.05
IGSF3-203ENST00000369486 CYB5RLQ6IPT4 315 aa15.36■□□□□ 0.05
IGSF3-203ENST00000369486 BECN1Q14457 450 aa15.34■□□□□ 0.05
IGSF3-203ENST00000369486 CASC1Q6TDU7 716 aa15.34■□□□□ 0.05
IGSF3-203ENST00000369486 FANCD2Q9BXW9 1451 aa15.34■□□□□ 0.05
IGSF3-203ENST00000369486 ANKRD30AQ9BXX3 1397 aa15.34■□□□□ 0.05
IGSF3-203ENST00000369486 ZNF330Q9Y3S2 320 aaPredicted RBP15.33■□□□□ 0.05
IGSF3-203ENST00000369486 WASHC2CQ9Y4E1 1318 aa15.33■□□□□ 0.04
IGSF3-203ENST00000369486 HDGFL2Q7Z4V5 671 aaPredicted RBP15.33■□□□□ 0.04
IGSF3-203ENST00000369486 APBB1O00213 710 aa15.32■□□□□ 0.04
IGSF3-203ENST00000369486 SPAG9O60271 1321 aaKnown RBP15.32■□□□□ 0.04
IGSF3-203ENST00000369486 CSB-PGBD3P0DP91 1061 aa15.32■□□□□ 0.04
IGSF3-203ENST00000369486 NAP1L2Q9ULW6 460 aaPredicted RBP15.31■□□□□ 0.04
IGSF3-203ENST00000369486 RTF1Q92541 710 aaKnown RBP15.3■□□□□ 0.04
IGSF3-203ENST00000369486 DDRGK1Q96HY6 314 aa15.29■□□□□ 0.04
IGSF3-203ENST00000369486 PNNQ9H307 717 aaKnown RBP15.29■□□□□ 0.04
IGSF3-203ENST00000369486 U2AF1L5P0DN76 240 aaPredicted RBP15.29■□□□□ 0.04
IGSF3-203ENST00000369486 U2AF1Q01081 240 aaKnown RBP eCLIP15.29■□□□□ 0.04
IGSF3-203ENST00000369486 KTN1Q86UP2 1357 aaKnown RBP15.28■□□□□ 0.04
IGSF3-203ENST00000369486 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.27■□□□□ 0.04
IGSF3-203ENST00000369486 CCDC9Q9Y3X0 531 aaKnown RBP15.27■□□□□ 0.04
IGSF3-203ENST00000369486 GOLGA2Q08379 1002 aa15.27■□□□□ 0.03
IGSF3-203ENST00000369486 L3MBTL2Q969R5 705 aa15.27■□□□□ 0.03
IGSF3-203ENST00000369486 CCDC146Q8IYE0 955 aa15.26■□□□□ 0.03
IGSF3-203ENST00000369486 TRAK1Q9UPV9 953 aa15.26■□□□□ 0.03
IGSF3-203ENST00000369486 PPP4R2Q9NY27 417 aa15.26■□□□□ 0.03
IGSF3-203ENST00000369486 SPRYD3Q8NCJ5 442 aa15.25■□□□□ 0.03
IGSF3-203ENST00000369486 LTV1Q96GA3 475 aaPredicted RBP15.25■□□□□ 0.03
IGSF3-203ENST00000369486 RAD54L2Q9Y4B4 1467 aa15.25■□□□□ 0.03
IGSF3-203ENST00000369486 KCNJ4P48050 445 aa15.25■□□□□ 0.03
IGSF3-203ENST00000369486 CCDC18Q5T9S5 1454 aa15.25■□□□□ 0.03
IGSF3-203ENST00000369486 FGD1P98174 961 aa15.23■□□□□ 0.03
IGSF3-203ENST00000369486 EID1Q9Y6B2 187 aa15.22■□□□□ 0.03
IGSF3-203ENST00000369486 PRDM2Q13029 1718 aa15.22■□□□□ 0.03
IGSF3-203ENST00000369486 CDK11BP21127 795 aaKnown RBP15.21■□□□□ 0.03
IGSF3-203ENST00000369486 NGDNQ8NEJ9 315 aaKnown RBP15.21■□□□□ 0.03
IGSF3-203ENST00000369486 GOLGA6L22H0YM25 854 aa15.2■□□□□ 0.02
IGSF3-203ENST00000369486 HSP90AB1P08238 724 aaKnown RBP15.19■□□□□ 0.02
IGSF3-203ENST00000369486 PTPRGP23470 1445 aa15.19■□□□□ 0.02
IGSF3-203ENST00000369486 FGD5Q6ZNL6 1462 aa15.18■□□□□ 0.02
IGSF3-203ENST00000369486 ITPRIPQ8IWB1 547 aa15.17■□□□□ 0.02
IGSF3-203ENST00000369486 TIMELESSQ9UNS1 1208 aa15.17■□□□□ 0.02
IGSF3-203ENST00000369486 ZRSR1Q15695 479 aaKnown RBP15.17■□□□□ 0.02
IGSF3-203ENST00000369486 PLCB2Q00722 1185 aa15.16■□□□□ 0.02
IGSF3-203ENST00000369486 OSCARQ8IYS5 282 aa15.16■□□□□ 0.02
IGSF3-203ENST00000369486 MS4A1P11836 297 aa15.16■□□□□ 0.02
IGSF3-203ENST00000369486 EIF3AQ14152 1382 aaKnown RBP15.15■□□□□ 0.02
IGSF3-203ENST00000369486 AQRO60306 1485 aaKnown RBP eCLIP15.15■□□□□ 0.02
IGSF3-203ENST00000369486 ISY1Q9ULR0 285 aaKnown RBP15.15■□□□□ 0.02
IGSF3-203ENST00000369486 RRP7AQ9Y3A4 280 aaKnown RBP15.15■□□□□ 0.02
IGSF3-203ENST00000369486 GAPVD1Q14C86 1478 aa15.14■□□□□ 0.01
IGSF3-203ENST00000369486 TRIM44Q96DX7 344 aaPredicted RBP15.14■□□□□ 0.01
IGSF3-203ENST00000369486 AMPHP49418 695 aa15.13■□□□□ 0.01
IGSF3-203ENST00000369486 CHMP4BQ9H444 224 aaKnown RBP15.13■□□□□ 0.01
IGSF3-203ENST00000369486 CHMP3Q9Y3E7 222 aa15.13■□□□□ 0.01
IGSF3-203ENST00000369486 CCER2I3L3R5 266 aa15.13■□□□□ 0.01
IGSF3-203ENST00000369486 PTMAP06454 111 aaKnown RBP15.12■□□□□ 0.01
IGSF3-203ENST00000369486 ST20-MTHFSA0A0A6YYL1 179 aa15.12■□□□□ 0.01
IGSF3-203ENST00000369486 TERF2IPQ9NYB0 399 aa15.12■□□□□ 0.01
IGSF3-203ENST00000369486 ZNF644Q9H582 1327 aaPredicted RBP15.12■□□□□ 0.01
IGSF3-203ENST00000369486 CLUAP1Q96AJ1 413 aa15.11■□□□□ 0.01
IGSF3-203ENST00000369486 RCAN3Q9UKA8 241 aa15.11■□□□□ 0.01
IGSF3-203ENST00000369486 SLC4A10Q6U841 1118 aa15.11■□□□□ 0.01
IGSF3-203ENST00000369486 FAM69CQ0P6D2 419 aa15.1■□□□□ 0.01
IGSF3-203ENST00000369486 RALBP1Q15311 655 aa15.1■□□□□ 0.01
IGSF3-203ENST00000369486 CCDC144AA2RUR9 1427 aa15.1■□□□□ 0.01
IGSF3-203ENST00000369486 MINK1Q8N4C8 1332 aaPredicted RBP15.1■□□□□ 0.01
IGSF3-203ENST00000369486 PANK3Q9H999 370 aa15.09■□□□□ 0.01
IGSF3-203ENST00000369486 RSPH4AQ5TD94 716 aa15.08■□□□□ 0
IGSF3-203ENST00000369486 SMC4Q9NTJ3 1288 aa15.08■□□□□ 0
IGSF3-203ENST00000369486 IPO8O15397 1037 aaKnown RBP15.06■□□□□ 0
IGSF3-203ENST00000369486 NOP58Q9Y2X3 529 aaKnown RBP15.05■□□□□ 0
IGSF3-203ENST00000369486 ELL2O00472 640 aaPredicted RBP15.05■□□□□ -0
IGSF3-203ENST00000369486 IGF1RP08069 1367 aa15.05■□□□□ -0
IGSF3-203ENST00000369486 HSCBQ8IWL3 235 aa15.05■□□□□ -0
IGSF3-203ENST00000369486 AMER1Q5JTC6 1135 aaPredicted RBP15.04■□□□□ -0
IGSF3-203ENST00000369486 NESP48681 1621 aa15.03■□□□□ -0
IGSF3-203ENST00000369486 STK31Q9BXU1 1019 aa15.03■□□□□ -0
IGSF3-203ENST00000369486 DNTTIP2Q5QJE6 756 aaKnown RBP15.03■□□□□ -0
IGSF3-203ENST00000369486 RTN4Q9NQC3 1192 aaKnown RBP15.03■□□□□ -0
IGSF3-203ENST00000369486 BCL2L13Q9BXK5 485 aa15.02■□□□□ -0
IGSF3-203ENST00000369486 CALD1Q05682 793 aaKnown RBP15.02□□□□□ -0.01
IGSF3-203ENST00000369486 DHX57Q6P158 1386 aaKnown RBP15.02□□□□□ -0.01
IGSF3-203ENST00000369486 TAF7LQ5H9L4 462 aa15□□□□□ -0.01
IGSF3-203ENST00000369486 MCCP23508 829 aa15□□□□□ -0.01
IGSF3-203ENST00000369486 NGEFQ8N5V2 710 aa15□□□□□ -0.01
IGSF3-203ENST00000369486 TRIM6-TRIM34B2RNG4 842 aa14.99□□□□□ -0.01
IGSF3-203ENST00000369486 GORABQ5T7V8 394 aa14.99□□□□□ -0.01
IGSF3-203ENST00000369486 EVA1CP58658 441 aa14.99□□□□□ -0.01
IGSF3-203ENST00000369486 CLSTN1O94985 981 aa14.98□□□□□ -0.01
IGSF3-203ENST00000369486 NECTIN2Q92692 538 aa14.98□□□□□ -0.01
IGSF3-203ENST00000369486 KIAA1211Q6ZU35 1233 aa14.98□□□□□ -0.01
IGSF3-203ENST00000369486 GOLGA6L4A6NEF3 574 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms