RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 EIF4G3O43432 1585 aaKnown RBP16.12■□□□□ 0.17
RAB39B-201ENST00000369454 TCOF1Q13428 1488 aaKnown RBP16.12■□□□□ 0.17
RAB39B-201ENST00000369454 DENND4BO75064 1496 aaPredicted RBP16.12■□□□□ 0.17
RAB39B-201ENST00000369454 POLR3GLQ9BT43 218 aa16.12■□□□□ 0.17
RAB39B-201ENST00000369454 MIA2Q96PC5 1412 aa16.11■□□□□ 0.17
RAB39B-201ENST00000369454 KIAA0556O60303 1618 aa16.11■□□□□ 0.17
RAB39B-201ENST00000369454 EIF4G2P78344 907 aaKnown RBP eCLIP16.11■□□□□ 0.17
RAB39B-201ENST00000369454 DAPK1P53355 1430 aa16.1■□□□□ 0.17
RAB39B-201ENST00000369454 WASHC2AQ641Q2 1341 aa16.1■□□□□ 0.17
RAB39B-201ENST00000369454 ABCC5O15440 1437 aa16.09■□□□□ 0.17
RAB39B-201ENST00000369454 NBPF8Q3BBV2 869 aa16.07■□□□□ 0.16
RAB39B-201ENST00000369454 CCER2I3L3R5 266 aa16.07■□□□□ 0.16
RAB39B-201ENST00000369454 C11orf95C9JLR9 678 aaPredicted RBP16.07■□□□□ 0.16
RAB39B-201ENST00000369454 HNRNPUQ00839 825 aaKnown RBP eCLIP16.07■□□□□ 0.16
RAB39B-201ENST00000369454 KDM5BQ9UGL1 1544 aa16.05■□□□□ 0.16
RAB39B-201ENST00000369454 RAPGEF6Q8TEU7 1601 aa16.05■□□□□ 0.16
RAB39B-201ENST00000369454 PLEKHD1A6NEE1 506 aa16.05■□□□□ 0.16
RAB39B-201ENST00000369454 NEFLP07196 543 aa16.03■□□□□ 0.16
RAB39B-201ENST00000369454 GCC2Q8IWJ2 1684 aa16.03■□□□□ 0.16
RAB39B-201ENST00000369454 CEP170Q5SW79 1584 aa16.03■□□□□ 0.16
RAB39B-201ENST00000369454 CCDC184Q52MB2 194 aa16.02■□□□□ 0.16
RAB39B-201ENST00000369454 TROQ12816 1431 aaPredicted RBP16.02■□□□□ 0.15
RAB39B-201ENST00000369454 SYNJ2O15056 1496 aa16.01■□□□□ 0.15
RAB39B-201ENST00000369454 PKD2Q13563 968 aa16.01■□□□□ 0.15
RAB39B-201ENST00000369454 CARMIL2Q6F5E8 1435 aa16.01■□□□□ 0.15
RAB39B-201ENST00000369454 IRX6P78412 446 aaPredicted RBP16.01■□□□□ 0.15
RAB39B-201ENST00000369454 ANKRD30BQ9BXX2 1392 aa16.01■□□□□ 0.15
RAB39B-201ENST00000369454 FAM9BQ8IZU0 186 aa16■□□□□ 0.15
RAB39B-201ENST00000369454 AKNAQ7Z591 1439 aa16■□□□□ 0.15
RAB39B-201ENST00000369454 CAMSAP2Q08AD1 1489 aa15.99■□□□□ 0.15
RAB39B-201ENST00000369454 HNRNPMP52272 730 aaKnown RBP eCLIP15.99■□□□□ 0.15
RAB39B-201ENST00000369454 MAGI1Q96QZ7 1491 aaPredicted RBP15.99■□□□□ 0.15
RAB39B-201ENST00000369454 SENP3-EIF4A1A0A087X0R7 540 aa15.99■□□□□ 0.15
RAB39B-201ENST00000369454 KIF14Q15058 1648 aa15.98■□□□□ 0.15
RAB39B-201ENST00000369454 ROCK1Q13464 1354 aa15.97■□□□□ 0.15
RAB39B-201ENST00000369454 GPATCH8Q9UKJ3 1502 aaKnown RBP15.97■□□□□ 0.15
RAB39B-201ENST00000369454 KDM2AQ9Y2K7 1162 aa15.97■□□□□ 0.15
RAB39B-201ENST00000369454 DNMT1P26358 1616 aaKnown RBP15.96■□□□□ 0.15
RAB39B-201ENST00000369454 NCOA1Q15788 1441 aa15.95■□□□□ 0.14
RAB39B-201ENST00000369454 TSPY4P0CV99 314 aa15.95■□□□□ 0.14
RAB39B-201ENST00000369454 TSPY10P0CW01 314 aa15.95■□□□□ 0.14
RAB39B-201ENST00000369454 TSHZ2Q9NRE2 1034 aa15.94■□□□□ 0.14
RAB39B-201ENST00000369454 RPRD2Q5VT52 1461 aaKnown RBP15.93■□□□□ 0.14
RAB39B-201ENST00000369454 MRS2Q9HD23 443 aa15.93■□□□□ 0.14
RAB39B-201ENST00000369454 NUP155O75694 1391 aa15.92■□□□□ 0.14
RAB39B-201ENST00000369454 CCDC7Q96M83 1385 aa15.92■□□□□ 0.14
RAB39B-201ENST00000369454 ANKRD30AQ9BXX3 1397 aa15.92■□□□□ 0.14
RAB39B-201ENST00000369454 KIF7Q2M1P5 1343 aa15.91■□□□□ 0.14
RAB39B-201ENST00000369454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.9■□□□□ 0.14
RAB39B-201ENST00000369454 PRKRIP1Q9H875 184 aaPredicted RBP15.9■□□□□ 0.14
RAB39B-201ENST00000369454 ANKRD50Q9ULJ7 1429 aa15.9■□□□□ 0.14
RAB39B-201ENST00000369454 PZPP20742 1482 aa15.9■□□□□ 0.14
RAB39B-201ENST00000369454 NUP160Q12769 1436 aa15.89■□□□□ 0.13
RAB39B-201ENST00000369454 ATP10BO94823 1461 aa15.89■□□□□ 0.13
RAB39B-201ENST00000369454 CNTLNQ9NXG0 1405 aa15.88■□□□□ 0.13
RAB39B-201ENST00000369454 TEX14Q8IWB6 1497 aa15.88■□□□□ 0.13
RAB39B-201ENST00000369454 PTPRGP23470 1445 aa15.88■□□□□ 0.13
RAB39B-201ENST00000369454 RGL3Q3MIN7 710 aa15.86■□□□□ 0.13
RAB39B-201ENST00000369454 DCAF11Q8TEB1 546 aa15.85■□□□□ 0.13
RAB39B-201ENST00000369454 C9orf84Q5VXU9 1444 aa15.85■□□□□ 0.13
RAB39B-201ENST00000369454 KIAA1107Q9UPP5 1409 aa15.85■□□□□ 0.13
RAB39B-201ENST00000369454 CARD11Q9BXL7 1154 aa15.84■□□□□ 0.13
RAB39B-201ENST00000369454 USP47Q96K76 1375 aa15.83■□□□□ 0.12
RAB39B-201ENST00000369454 KIF15Q9NS87 1388 aa15.82■□□□□ 0.12
RAB39B-201ENST00000369454 ITSN2Q9NZM3 1697 aa15.82■□□□□ 0.12
RAB39B-201ENST00000369454 SPATA31E1Q6ZUB1 1445 aa15.78■□□□□ 0.12
RAB39B-201ENST00000369454 ABCA8O94911 1581 aa15.78■□□□□ 0.12
RAB39B-201ENST00000369454 ST20-MTHFSA0A0A6YYL1 179 aa15.77■□□□□ 0.12
RAB39B-201ENST00000369454 ABCC10Q5T3U5 1492 aa15.77■□□□□ 0.12
RAB39B-201ENST00000369454 CDC42BPAQ5VT25 1732 aa15.77■□□□□ 0.11
RAB39B-201ENST00000369454 ADGRL2O95490 1459 aa15.76■□□□□ 0.11
RAB39B-201ENST00000369454 ADGBQ8N7X0 1667 aa15.75■□□□□ 0.11
RAB39B-201ENST00000369454 ADCY10Q96PN6 1610 aa15.73■□□□□ 0.11
RAB39B-201ENST00000369454 SALL2Q9Y467 1007 aaPredicted RBP15.71■□□□□ 0.11
RAB39B-201ENST00000369454 CROCC2H7BZ55 1655 aa15.71■□□□□ 0.11
RAB39B-201ENST00000369454 NBPF1Q3BBV0 1214 aa15.7■□□□□ 0.1
RAB39B-201ENST00000369454 TMC1Q8TDI8 760 aa15.69■□□□□ 0.1
RAB39B-201ENST00000369454 ROCK2O75116 1388 aaKnown RBP15.69■□□□□ 0.1
RAB39B-201ENST00000369454 MBD5Q9P267 1494 aa15.69■□□□□ 0.1
RAB39B-201ENST00000369454 ARHGAP5Q13017 1502 aa15.69■□□□□ 0.1
RAB39B-201ENST00000369454 ERCC6L2Q5T890 1561 aa15.69■□□□□ 0.1
RAB39B-201ENST00000369454 MYT1LQ9UL68 1186 aa15.69■□□□□ 0.1
RAB39B-201ENST00000369454 RBM19Q9Y4C8 960 aaKnown RBP15.68■□□□□ 0.1
RAB39B-201ENST00000369454 BCORL1Q5H9F3 1711 aa15.67■□□□□ 0.1
RAB39B-201ENST00000369454 CCDC141Q6ZP82 1450 aa15.67■□□□□ 0.1
RAB39B-201ENST00000369454 B4GALNT3Q6L9W6 998 aa15.67■□□□□ 0.1
RAB39B-201ENST00000369454 SYCP2Q9BX26 1530 aa15.67■□□□□ 0.1
RAB39B-201ENST00000369454 DHX29Q7Z478 1369 aaKnown RBP15.67■□□□□ 0.1
RAB39B-201ENST00000369454 SAMD9LQ8IVG5 1584 aa15.66■□□□□ 0.1
RAB39B-201ENST00000369454 ZBED9Q6R2W3 1325 aa15.66■□□□□ 0.1
RAB39B-201ENST00000369454 CCDC144AA2RUR9 1427 aa15.65■□□□□ 0.1
RAB39B-201ENST00000369454 SHANK2Q9UPX8 1470 aa15.65■□□□□ 0.1
RAB39B-201ENST00000369454 CHD1O14646 1710 aa15.65■□□□□ 0.1
RAB39B-201ENST00000369454 PLEKHH2Q8IVE3 1493 aa15.62■□□□□ 0.09
RAB39B-201ENST00000369454 RSPH4AQ5TD94 716 aa15.62■□□□□ 0.09
RAB39B-201ENST00000369454 CDC42BPBQ9Y5S2 1711 aa15.62■□□□□ 0.09
RAB39B-201ENST00000369454 FAM135AQ9P2D6 1515 aa15.62■□□□□ 0.09
RAB39B-201ENST00000369454 TTC37Q6PGP7 1564 aa15.62■□□□□ 0.09
RAB39B-201ENST00000369454 AFAP1Q8N556 730 aa15.61■□□□□ 0.09
RAB39B-201ENST00000369454 KDM5CP41229 1560 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms