RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 SPATA31E1Q6ZUB1 1445 aa21.6■■□□□ 1.05
CHD1L-203ENST00000369259 RRP7BPQ9NSQ0 103 aa21.57■■□□□ 1.04
CHD1L-203ENST00000369259 DHX29Q7Z478 1369 aaKnown RBP21.57■■□□□ 1.04
CHD1L-203ENST00000369259 HMGXB3Q12766 1538 aa21.56■■□□□ 1.04
CHD1L-203ENST00000369259 NBPF8Q3BBV2 869 aa21.56■■□□□ 1.04
CHD1L-203ENST00000369259 DDRGK1Q96HY6 314 aa21.56■■□□□ 1.04
CHD1L-203ENST00000369259 EIF5BO60841 1220 aaKnown RBP21.55■■□□□ 1.04
CHD1L-203ENST00000369259 RRP1P56182 461 aaKnown RBP21.55■■□□□ 1.04
CHD1L-203ENST00000369259 POLR1AO95602 1720 aaPredicted RBP21.55■■□□□ 1.04
CHD1L-203ENST00000369259 EXOC6Q8TAG9 804 aa21.55■■□□□ 1.04
CHD1L-203ENST00000369259 MPHOSPH9Q99550 1183 aa21.55■■□□□ 1.04
CHD1L-203ENST00000369259 PNISRQ8TF01 805 aaKnown RBP21.53■■□□□ 1.04
CHD1L-203ENST00000369259 SNAPC4Q5SXM2 1469 aa21.52■■□□□ 1.04
CHD1L-203ENST00000369259 NFKBIBQ15653 356 aa21.51■■□□□ 1.03
CHD1L-203ENST00000369259 GCC2Q8IWJ2 1684 aa21.5■■□□□ 1.03
CHD1L-203ENST00000369259 CHIC2Q9UKJ5 165 aa21.49■■□□□ 1.03
CHD1L-203ENST00000369259 FRAT1Q92837 279 aaPredicted RBP21.48■■□□□ 1.03
CHD1L-203ENST00000369259 SENP3-EIF4A1A0A087X0R7 540 aa21.48■■□□□ 1.03
CHD1L-203ENST00000369259 CNGB1Q14028 1251 aaPredicted RBP21.48■■□□□ 1.03
CHD1L-203ENST00000369259 RPRD2Q5VT52 1461 aaKnown RBP21.47■■□□□ 1.03
CHD1L-203ENST00000369259 TEX14Q8IWB6 1497 aa21.46■■□□□ 1.03
CHD1L-203ENST00000369259 FOXD1Q16676 465 aa21.46■■□□□ 1.03
CHD1L-203ENST00000369259 TMC1Q8TDI8 760 aa21.46■■□□□ 1.03
CHD1L-203ENST00000369259 RSPH6AQ9H0K4 717 aa21.46■■□□□ 1.03
CHD1L-203ENST00000369259 MIA2Q96PC5 1412 aa21.46■■□□□ 1.03
CHD1L-203ENST00000369259 SUPT6HQ7KZ85 1726 aaKnown RBP21.45■■□□□ 1.02
CHD1L-203ENST00000369259 RCAN3Q9UKA8 241 aa21.45■■□□□ 1.02
CHD1L-203ENST00000369259 KDM6BO15054 1643 aa21.44■■□□□ 1.02
CHD1L-203ENST00000369259 ANKRD30BQ9BXX2 1392 aa21.44■■□□□ 1.02
CHD1L-203ENST00000369259 TCOF1Q13428 1488 aaKnown RBP21.42■■□□□ 1.02
CHD1L-203ENST00000369259 LRPPRCP42704 1394 aaKnown RBP21.42■■□□□ 1.02
CHD1L-203ENST00000369259 EHBP1L1Q8N3D4 1523 aa21.41■■□□□ 1.02
CHD1L-203ENST00000369259 UGGT2Q9NYU1 1516 aa21.41■■□□□ 1.02
CHD1L-203ENST00000369259 FAM43AQ8N2R8 423 aa21.4■■□□□ 1.02
CHD1L-203ENST00000369259 PRDM2Q13029 1718 aa21.39■■□□□ 1.01
CHD1L-203ENST00000369259 ARID4BQ4LE39 1312 aaPredicted RBP21.39■■□□□ 1.01
CHD1L-203ENST00000369259 ARHGEF11O15085 1522 aa21.38■■□□□ 1.01
CHD1L-203ENST00000369259 POLR3GLQ9BT43 218 aa21.37■■□□□ 1.01
CHD1L-203ENST00000369259 DAXXQ9UER7 740 aaPredicted RBP21.37■■□□□ 1.01
CHD1L-203ENST00000369259 GRIN2BQ13224 1484 aa21.36■■□□□ 1.01
CHD1L-203ENST00000369259 LRRIQ1Q96JM4 1722 aa21.36■■□□□ 1.01
CHD1L-203ENST00000369259 CTTNBP2Q8WZ74 1663 aa21.35■■□□□ 1.01
CHD1L-203ENST00000369259 THOC2Q8NI27 1593 aaKnown RBP21.34■■□□□ 1.01
CHD1L-203ENST00000369259 SLC4A3P48751 1232 aa21.34■■□□□ 1.01
CHD1L-203ENST00000369259 BRD4O60885 1362 aaPredicted RBP21.33■■□□□ 1.01
CHD1L-203ENST00000369259 PDE3BQ13370 1112 aa21.33■■□□□ 1
CHD1L-203ENST00000369259 USP47Q96K76 1375 aa21.33■■□□□ 1
CHD1L-203ENST00000369259 ROCK2O75116 1388 aaKnown RBP21.32■■□□□ 1
CHD1L-203ENST00000369259 BCORL1Q5H9F3 1711 aa21.32■■□□□ 1
CHD1L-203ENST00000369259 KIF15Q9NS87 1388 aa21.3■■□□□ 1
CHD1L-203ENST00000369259 MYBBP1AQ9BQG0 1328 aaKnown RBP21.29■■□□□ 1
CHD1L-203ENST00000369259 SKAP1Q86WV1 359 aa21.28■■□□□ 1
CHD1L-203ENST00000369259 KTN1Q86UP2 1357 aaKnown RBP21.27■■□□□ 1
CHD1L-203ENST00000369259 CC2D2AQ9P2K1 1620 aa21.27■■□□□ 1
CHD1L-203ENST00000369259 SAMD9Q5K651 1589 aa21.26■□□□□ 0.99
CHD1L-203ENST00000369259 DCAF11Q8TEB1 546 aa21.26■□□□□ 0.99
CHD1L-203ENST00000369259 MAGI3Q5TCQ9 1506 aa21.26■□□□□ 0.99
CHD1L-203ENST00000369259 FRAT2O75474 233 aaPredicted RBP21.26■□□□□ 0.99
CHD1L-203ENST00000369259 RALBP1Q15311 655 aa21.26■□□□□ 0.99
CHD1L-203ENST00000369259 CUL7Q14999 1698 aa21.26■□□□□ 0.99
CHD1L-203ENST00000369259 SLC4A1APQ9BWU0 796 aaKnown RBP21.25■□□□□ 0.99
CHD1L-203ENST00000369259 CADPSQ9ULU8 1353 aa21.24■□□□□ 0.99
CHD1L-203ENST00000369259 CRBNQ96SW2 442 aa21.24■□□□□ 0.99
CHD1L-203ENST00000369259 MBD5Q9P267 1494 aa21.23■□□□□ 0.99
CHD1L-203ENST00000369259 ABCA10Q8WWZ4 1543 aa21.23■□□□□ 0.99
CHD1L-203ENST00000369259 PLIN1O60240 522 aa21.22■□□□□ 0.99
CHD1L-203ENST00000369259 PKNOX2Q96KN3 472 aa21.22■□□□□ 0.99
CHD1L-203ENST00000369259 ROCK1Q13464 1354 aa21.21■□□□□ 0.99
CHD1L-203ENST00000369259 KDM5CP41229 1560 aa21.2■□□□□ 0.98
CHD1L-203ENST00000369259 FAM161AQ3B820 660 aa21.2■□□□□ 0.98
CHD1L-203ENST00000369259 CDCA7LQ96GN5 454 aa21.19■□□□□ 0.98
CHD1L-203ENST00000369259 RAD54L2Q9Y4B4 1467 aa21.19■□□□□ 0.98
CHD1L-203ENST00000369259 KDM2BQ8NHM5 1336 aa21.18■□□□□ 0.98
CHD1L-203ENST00000369259 ZNF326Q5BKZ1 582 aaKnown RBP21.17■□□□□ 0.98
CHD1L-203ENST00000369259 C8orf34Q49A92 452 aa21.16■□□□□ 0.98
CHD1L-203ENST00000369259 GLIPR1L2Q4G1C9 344 aa21.16■□□□□ 0.98
CHD1L-203ENST00000369259 KIF14Q15058 1648 aa21.15■□□□□ 0.98
CHD1L-203ENST00000369259 CENPQQ7L2Z9 268 aaPredicted RBP21.15■□□□□ 0.98
CHD1L-203ENST00000369259 NLRP13Q86W25 1043 aa21.15■□□□□ 0.98
CHD1L-203ENST00000369259 DAPK1P53355 1430 aa21.13■□□□□ 0.97
CHD1L-203ENST00000369259 RRAGDQ9NQL2 400 aaPredicted RBP21.11■□□□□ 0.97
CHD1L-203ENST00000369259 POLA1P09884 1462 aaPredicted RBP21.09■□□□□ 0.97
CHD1L-203ENST00000369259 PZPP20742 1482 aa21.09■□□□□ 0.97
CHD1L-203ENST00000369259 CARD11Q9BXL7 1154 aa21.08■□□□□ 0.97
CHD1L-203ENST00000369259 RALGAPBQ86X10 1494 aa21.08■□□□□ 0.96
CHD1L-203ENST00000369259 ABCC5O15440 1437 aa21.08■□□□□ 0.96
CHD1L-203ENST00000369259 C20orf194Q5TEA3 1177 aa21.08■□□□□ 0.96
CHD1L-203ENST00000369259 KIF21AQ7Z4S6 1674 aa21.07■□□□□ 0.96
CHD1L-203ENST00000369259 UHRF1BP1Q6BDS2 1440 aa21.07■□□□□ 0.96
CHD1L-203ENST00000369259 PARD3Q8TEW0 1356 aa21.07■□□□□ 0.96
CHD1L-203ENST00000369259 L1TD1Q5T7N2 865 aaKnown RBP21.07■□□□□ 0.96
CHD1L-203ENST00000369259 DNMBPQ6XZF7 1577 aa21.06■□□□□ 0.96
CHD1L-203ENST00000369259 INSRP06213 1382 aa21.06■□□□□ 0.96
CHD1L-203ENST00000369259 POGKQ9P215 609 aa21.06■□□□□ 0.96
CHD1L-203ENST00000369259 KIAA1107Q9UPP5 1409 aa21.05■□□□□ 0.96
CHD1L-203ENST00000369259 EPRSP07814 1512 aaKnown RBP21.04■□□□□ 0.96
CHD1L-203ENST00000369259 FANCD2Q9BXW9 1451 aa21.04■□□□□ 0.96
CHD1L-203ENST00000369259 ST20-MTHFSA0A0A6YYL1 179 aa21.04■□□□□ 0.96
CHD1L-203ENST00000369259 DNMT1P26358 1616 aaKnown RBP21.03■□□□□ 0.96
CHD1L-203ENST00000369259 E9PCH4 1651 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms