RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 GRIN2BQ13224 1484 aa17.64■□□□□ 0.41
CHD1L-202ENST00000369258 CUL7Q14999 1698 aa17.63■□□□□ 0.41
CHD1L-202ENST00000369258 CNTLNQ9NXG0 1405 aa17.63■□□□□ 0.41
CHD1L-202ENST00000369258 KDM2AQ9Y2K7 1162 aa17.63■□□□□ 0.41
CHD1L-202ENST00000369258 PDS5BQ9NTI5 1447 aa17.6■□□□□ 0.41
CHD1L-202ENST00000369258 SUPT6HQ7KZ85 1726 aaKnown RBP17.58■□□□□ 0.4
CHD1L-202ENST00000369258 SKAP1Q86WV1 359 aa17.57■□□□□ 0.4
CHD1L-202ENST00000369258 EHBP1L1Q8N3D4 1523 aa17.56■□□□□ 0.4
CHD1L-202ENST00000369258 UGGT2Q9NYU1 1516 aa17.56■□□□□ 0.4
CHD1L-202ENST00000369258 THOC2Q8NI27 1593 aaKnown RBP17.55■□□□□ 0.4
CHD1L-202ENST00000369258 FBLN2P98095 1184 aa17.55■□□□□ 0.4
CHD1L-202ENST00000369258 NCOA1Q15788 1441 aa17.54■□□□□ 0.4
CHD1L-202ENST00000369258 ZBED9Q6R2W3 1325 aa17.54■□□□□ 0.4
CHD1L-202ENST00000369258 NPM2Q86SE8 214 aaKnown RBP17.54■□□□□ 0.4
CHD1L-202ENST00000369258 ANKRD30BQ9BXX2 1392 aa17.53■□□□□ 0.4
CHD1L-202ENST00000369258 SAMD9Q5K651 1589 aa17.52■□□□□ 0.4
CHD1L-202ENST00000369258 EPRSP07814 1512 aaKnown RBP17.52■□□□□ 0.4
CHD1L-202ENST00000369258 CCDC136Q96JN2 1154 aa17.52■□□□□ 0.4
CHD1L-202ENST00000369258 PKD2Q13563 968 aa17.51■□□□□ 0.39
CHD1L-202ENST00000369258 LAMC3Q9Y6N6 1575 aa17.49■□□□□ 0.39
CHD1L-202ENST00000369258 DEKP35659 375 aaKnown RBP17.49■□□□□ 0.39
CHD1L-202ENST00000369258 TCOF1Q13428 1488 aaKnown RBP17.48■□□□□ 0.39
CHD1L-202ENST00000369258 HECW1Q76N89 1606 aa17.48■□□□□ 0.39
CHD1L-202ENST00000369258 ARHGEF11O15085 1522 aa17.47■□□□□ 0.39
CHD1L-202ENST00000369258 TMC1Q8TDI8 760 aa17.47■□□□□ 0.39
CHD1L-202ENST00000369258 ABCC5O15440 1437 aa17.46■□□□□ 0.39
CHD1L-202ENST00000369258 CFDP1Q9UEE9 299 aaPredicted RBP17.46■□□□□ 0.39
CHD1L-202ENST00000369258 MYT1LQ9UL68 1186 aa17.46■□□□□ 0.39
CHD1L-202ENST00000369258 DAPK1P53355 1430 aa17.45■□□□□ 0.38
CHD1L-202ENST00000369258 GCC2Q8IWJ2 1684 aa17.45■□□□□ 0.38
CHD1L-202ENST00000369258 PRG4Q92954 1404 aaPredicted RBP17.44■□□□□ 0.38
CHD1L-202ENST00000369258 USP47Q96K76 1375 aa17.44■□□□□ 0.38
CHD1L-202ENST00000369258 ST20-MTHFSA0A0A6YYL1 179 aa17.43■□□□□ 0.38
CHD1L-202ENST00000369258 RGL3Q3MIN7 710 aa17.43■□□□□ 0.38
CHD1L-202ENST00000369258 ABCA5Q8WWZ7 1642 aa17.43■□□□□ 0.38
CHD1L-202ENST00000369258 RPRD2Q5VT52 1461 aaKnown RBP17.43■□□□□ 0.38
CHD1L-202ENST00000369258 TEX14Q8IWB6 1497 aa17.43■□□□□ 0.38
CHD1L-202ENST00000369258 NOP58Q9Y2X3 529 aaKnown RBP17.43■□□□□ 0.38
CHD1L-202ENST00000369258 CARD11Q9BXL7 1154 aa17.42■□□□□ 0.38
CHD1L-202ENST00000369258 SPATA31E1Q6ZUB1 1445 aa17.42■□□□□ 0.38
CHD1L-202ENST00000369258 DHX29Q7Z478 1369 aaKnown RBP17.42■□□□□ 0.38
CHD1L-202ENST00000369258 PLIN1O60240 522 aa17.42■□□□□ 0.38
CHD1L-202ENST00000369258 MIA2Q96PC5 1412 aa17.42■□□□□ 0.38
CHD1L-202ENST00000369258 NUDCQ9Y266 331 aa17.41■□□□□ 0.38
CHD1L-202ENST00000369258 DCAF11Q8TEB1 546 aa17.4■□□□□ 0.38
CHD1L-202ENST00000369258 EXOC6Q8TAG9 804 aa17.4■□□□□ 0.38
CHD1L-202ENST00000369258 ZNF608Q9ULD9 1512 aaPredicted RBP17.4■□□□□ 0.38
CHD1L-202ENST00000369258 CDCA7LQ96GN5 454 aa17.39■□□□□ 0.37
CHD1L-202ENST00000369258 PNISRQ8TF01 805 aaKnown RBP17.38■□□□□ 0.37
CHD1L-202ENST00000369258 BCORL1Q5H9F3 1711 aa17.38■□□□□ 0.37
CHD1L-202ENST00000369258 KIF21AQ7Z4S6 1674 aa17.38■□□□□ 0.37
CHD1L-202ENST00000369258 LAS1LQ9Y4W2 734 aaKnown RBP17.37■□□□□ 0.37
CHD1L-202ENST00000369258 CC2D1BQ5T0F9 858 aaKnown RBP17.36■□□□□ 0.37
CHD1L-202ENST00000369258 SMG6Q86US8 1419 aaKnown RBP17.36■□□□□ 0.37
CHD1L-202ENST00000369258 IQGAP2Q13576 1575 aa17.34■□□□□ 0.37
CHD1L-202ENST00000369258 HNRNPMP52272 730 aaKnown RBP eCLIP17.34■□□□□ 0.373e-7■■□□□ 12.7
CHD1L-202ENST00000369258 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.34■□□□□ 0.371e-8■■□□□ 13.5
CHD1L-202ENST00000369258 ROCK1Q13464 1354 aa17.33■□□□□ 0.37
CHD1L-202ENST00000369258 PZPP20742 1482 aa17.33■□□□□ 0.37
CHD1L-202ENST00000369258 RTN4Q9NQC3 1192 aaKnown RBP17.33■□□□□ 0.36
CHD1L-202ENST00000369258 NBPF1Q3BBV0 1214 aa17.32■□□□□ 0.36
CHD1L-202ENST00000369258 NUP155O75694 1391 aa17.32■□□□□ 0.36
CHD1L-202ENST00000369258 PLB1Q6P1J6 1458 aa17.32■□□□□ 0.36
CHD1L-202ENST00000369258 WDR62O43379 1518 aa17.32■□□□□ 0.36
CHD1L-202ENST00000369258 ANP32AP39687 249 aaKnown RBP17.31■□□□□ 0.36
CHD1L-202ENST00000369258 NUP153P49790 1475 aaKnown RBP17.31■□□□□ 0.36
CHD1L-202ENST00000369258 TARBP1Q13395 1621 aaKnown RBP17.28■□□□□ 0.36
CHD1L-202ENST00000369258 ZBTB47Q9UFB7 747 aaPredicted RBP17.28■□□□□ 0.36
CHD1L-202ENST00000369258 RNF123Q5XPI4 1314 aa17.27■□□□□ 0.36
CHD1L-202ENST00000369258 SLC4A3P48751 1232 aa17.26■□□□□ 0.35
CHD1L-202ENST00000369258 CHMP7Q8WUX9 453 aaPredicted RBP17.26■□□□□ 0.35
CHD1L-202ENST00000369258 IPO9Q96P70 1041 aaKnown RBP17.26■□□□□ 0.35
CHD1L-202ENST00000369258 CAMSAP2Q08AD1 1489 aa17.25■□□□□ 0.35
CHD1L-202ENST00000369258 DISP1Q96F81 1524 aa17.24■□□□□ 0.35
CHD1L-202ENST00000369258 RRP1P56182 461 aaKnown RBP17.23■□□□□ 0.35
CHD1L-202ENST00000369258 RCAN3Q9UKA8 241 aa17.23■□□□□ 0.35
CHD1L-202ENST00000369258 KIF14Q15058 1648 aa17.23■□□□□ 0.35
CHD1L-202ENST00000369258 KIAA1107Q9UPP5 1409 aa17.23■□□□□ 0.35
CHD1L-202ENST00000369258 C20orf194Q5TEA3 1177 aa17.22■□□□□ 0.35
CHD1L-202ENST00000369258 DNMT1P26358 1616 aaKnown RBP17.22■□□□□ 0.35
CHD1L-202ENST00000369258 RTL5Q5HYW3 569 aaPredicted RBP17.22■□□□□ 0.35
CHD1L-202ENST00000369258 PBRM1Q86U86 1689 aa17.21■□□□□ 0.35
CHD1L-202ENST00000369258 ANKRD50Q9ULJ7 1429 aa17.21■□□□□ 0.35
CHD1L-202ENST00000369258 POLR1AO95602 1720 aaPredicted RBP17.21■□□□□ 0.35
CHD1L-202ENST00000369258 IL27Q8NEV9 243 aa17.21■□□□□ 0.35
CHD1L-202ENST00000369258 ARID4BQ4LE39 1312 aaPredicted RBP17.2■□□□□ 0.34
CHD1L-202ENST00000369258 ROCK2O75116 1388 aaKnown RBP17.2■□□□□ 0.34
CHD1L-202ENST00000369258 GPATCH8Q9UKJ3 1502 aaKnown RBP17.2■□□□□ 0.34
CHD1L-202ENST00000369258 ADAMTS12P58397 1594 aa17.18■□□□□ 0.34
CHD1L-202ENST00000369258 PDE4AP27815 886 aa17.17■□□□□ 0.34
CHD1L-202ENST00000369258 TSPY4P0CV99 314 aa17.16■□□□□ 0.34
CHD1L-202ENST00000369258 TSPY10P0CW01 314 aa17.16■□□□□ 0.34
CHD1L-202ENST00000369258 MYBBP1AQ9BQG0 1328 aaKnown RBP17.16■□□□□ 0.34
CHD1L-202ENST00000369258 CRBNQ96SW2 442 aa17.16■□□□□ 0.34
CHD1L-202ENST00000369258 MBD5Q9P267 1494 aa17.15■□□□□ 0.34
CHD1L-202ENST00000369258 ANKRD30AQ9BXX3 1397 aa17.15■□□□□ 0.34
CHD1L-202ENST00000369258 PLEKHD1A6NEE1 506 aa17.15■□□□□ 0.34
CHD1L-202ENST00000369258 JPH4Q96JJ6 628 aa17.15■□□□□ 0.34
CHD1L-202ENST00000369258 KDM5CP41229 1560 aa17.15■□□□□ 0.34
CHD1L-202ENST00000369258 KIF15Q9NS87 1388 aa17.14■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms