RNA–Protein interactions for RNA: ENST00000368916.1

GABPB2-201, Transcript of GA binding protein transcription factor subunit beta 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene GABPB2, Length 1,680 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB2-201ENST00000368916 TOP2BQ02880 1626 aa10.27□□□□□ -0.77
GABPB2-201ENST00000368916 PHF12Q96QT6 1004 aa10.26□□□□□ -0.77
GABPB2-201ENST00000368916 MAPKBP1O60336 1514 aa10.25□□□□□ -0.77
GABPB2-201ENST00000368916 ARAP1Q96P48 1450 aa10.25□□□□□ -0.77
GABPB2-201ENST00000368916 RAB3GAP2Q9H2M9 1393 aa10.24□□□□□ -0.77
GABPB2-201ENST00000368916 DEKP35659 375 aaKnown RBP10.24□□□□□ -0.77
GABPB2-201ENST00000368916 DDX10Q13206 875 aaKnown RBP10.24□□□□□ -0.77
GABPB2-201ENST00000368916 BIVM-ERCC5R4GMW8 1640 aa10.24□□□□□ -0.77
GABPB2-201ENST00000368916 FBXO3Q9UK99 471 aa10.22□□□□□ -0.77
GABPB2-201ENST00000368916 USP35Q9P2H5 1018 aa10.22□□□□□ -0.77
GABPB2-201ENST00000368916 RTL5Q5HYW3 569 aaPredicted RBP10.2□□□□□ -0.78
GABPB2-201ENST00000368916 NOP58Q9Y2X3 529 aaKnown RBP10.2□□□□□ -0.78
GABPB2-201ENST00000368916 WDR97A6NE52 1622 aa10.19□□□□□ -0.78
GABPB2-201ENST00000368916 KCNH8Q96L42 1107 aa10.18□□□□□ -0.78
GABPB2-201ENST00000368916 KIF27Q86VH2 1401 aa10.18□□□□□ -0.78
GABPB2-201ENST00000368916 FHAD1B1AJZ9 1412 aa10.17□□□□□ -0.78
GABPB2-201ENST00000368916 ANP32AP39687 249 aaKnown RBP10.16□□□□□ -0.78
GABPB2-201ENST00000368916 VASPP50552 380 aaPredicted RBP10.16□□□□□ -0.78
GABPB2-201ENST00000368916 KANK4Q5T7N3 995 aaPredicted RBP10.16□□□□□ -0.78
GABPB2-201ENST00000368916 KRTAP3-3Q9BYR6 98 aa10.16□□□□□ -0.78
GABPB2-201ENST00000368916 KRTAP3-2Q9BYR7 98 aa10.16□□□□□ -0.78
GABPB2-201ENST00000368916 TIAM1Q13009 1591 aa10.16□□□□□ -0.78
GABPB2-201ENST00000368916 TRIM52Q96A61 297 aa10.15□□□□□ -0.79
GABPB2-201ENST00000368916 ITGAEP38570 1179 aa10.14□□□□□ -0.79
GABPB2-201ENST00000368916 TONSLQ96HA7 1378 aa10.14□□□□□ -0.79
GABPB2-201ENST00000368916 MNX1P50219 401 aaPredicted RBP10.12□□□□□ -0.79
GABPB2-201ENST00000368916 HNRNPUQ00839 825 aaKnown RBP eCLIP10.12□□□□□ -0.79
GABPB2-201ENST00000368916 RNF166Q96A37 237 aaPredicted RBP10.12□□□□□ -0.79
GABPB2-201ENST00000368916 MS4A3Q96HJ5 214 aa10.12□□□□□ -0.79
GABPB2-201ENST00000368916 IPO9Q96P70 1041 aaKnown RBP10.12□□□□□ -0.79
GABPB2-201ENST00000368916 LRRC9Q6ZRR7 1453 aa10.12□□□□□ -0.79
GABPB2-201ENST00000368916 PLCD3Q8N3E9 789 aa10.12□□□□□ -0.79
GABPB2-201ENST00000368916 ZBED9Q6R2W3 1325 aa10.12□□□□□ -0.79
GABPB2-201ENST00000368916 ARHGAP35Q9NRY4 1499 aa10.11□□□□□ -0.79
GABPB2-201ENST00000368916 ZBTB47Q9UFB7 747 aaPredicted RBP10.11□□□□□ -0.79
GABPB2-201ENST00000368916 POTEFA5A3E0 1075 aa10.09□□□□□ -0.79
GABPB2-201ENST00000368916 UNC13AQ9UPW8 1703 aa10.08□□□□□ -0.8
GABPB2-201ENST00000368916 UACAQ9BZF9 1416 aa10.08□□□□□ -0.8
GABPB2-201ENST00000368916 C11orf95C9JLR9 678 aaPredicted RBP10.08□□□□□ -0.8
GABPB2-201ENST00000368916 PPM1GO15355 546 aaPredicted RBP10.08□□□□□ -0.8
GABPB2-201ENST00000368916 ATAD2BQ9ULI0 1458 aa10.07□□□□□ -0.8
GABPB2-201ENST00000368916 SLAIN1Q8ND83 568 aa10.07□□□□□ -0.8
GABPB2-201ENST00000368916 CFAP43Q8NDM7 1665 aa10.07□□□□□ -0.8
GABPB2-201ENST00000368916 IFNLR1Q8IU57 520 aaPredicted RBP10.06□□□□□ -0.8
GABPB2-201ENST00000368916 AQRO60306 1485 aaKnown RBP eCLIP10.06□□□□□ -0.8
GABPB2-201ENST00000368916 NCOA2Q15596 1464 aa10.05□□□□□ -0.8
GABPB2-201ENST00000368916 UBE2Q2Q8WVN8 375 aa10.05□□□□□ -0.8
GABPB2-201ENST00000368916 WASHC2AQ641Q2 1341 aa10.04□□□□□ -0.8
GABPB2-201ENST00000368916 CCDC18Q5T9S5 1454 aa10.03□□□□□ -0.8
GABPB2-201ENST00000368916 HFM1A2PYH4 1435 aa10.03□□□□□ -0.8
GABPB2-201ENST00000368916 SMG6Q86US8 1419 aaKnown RBP10.03□□□□□ -0.8
GABPB2-201ENST00000368916 NCAPD3P42695 1498 aa10.03□□□□□ -0.8
GABPB2-201ENST00000368916 RNF123Q5XPI4 1314 aa10.03□□□□□ -0.8
GABPB2-201ENST00000368916 CNTLNQ9NXG0 1405 aa10.03□□□□□ -0.8
GABPB2-201ENST00000368916 MARVELD3Q96A59 401 aa10.02□□□□□ -0.8
GABPB2-201ENST00000368916 SIN3AQ96ST3 1273 aa10.02□□□□□ -0.8
GABPB2-201ENST00000368916 KLHL34Q8N239 644 aa10.02□□□□□ -0.81
GABPB2-201ENST00000368916 FYCO1Q9BQS8 1478 aa10.01□□□□□ -0.81
GABPB2-201ENST00000368916 EFCAB5A4FU69 1503 aa10.01□□□□□ -0.81
GABPB2-201ENST00000368916 MS4A1P11836 297 aa10.01□□□□□ -0.81
GABPB2-201ENST00000368916 EIF4G2P78344 907 aaKnown RBP eCLIP10.01□□□□□ -0.81
GABPB2-201ENST00000368916 TCERG1O14776 1098 aaKnown RBP10□□□□□ -0.81
GABPB2-201ENST00000368916 DDRGK1Q96HY6 314 aa10□□□□□ -0.81
GABPB2-201ENST00000368916 WASHC2CQ9Y4E1 1318 aa10□□□□□ -0.81
GABPB2-201ENST00000368916 PHLDB1Q86UU1 1377 aa9.99□□□□□ -0.81
GABPB2-201ENST00000368916 PLEKHG5O94827 1062 aa9.99□□□□□ -0.81
GABPB2-201ENST00000368916 ATN1P54259 1190 aaPredicted RBP9.99□□□□□ -0.81
GABPB2-201ENST00000368916 CCDC136Q96JN2 1154 aa9.99□□□□□ -0.81
GABPB2-201ENST00000368916 CUX1P39880 1505 aa9.99□□□□□ -0.81
GABPB2-201ENST00000368916 ARID4BQ4LE39 1312 aaPredicted RBP9.98□□□□□ -0.81
GABPB2-201ENST00000368916 FAM50AQ14320 339 aaKnown RBP9.98□□□□□ -0.81
GABPB2-201ENST00000368916 FMN1Q68DA7 1419 aa9.98□□□□□ -0.81
GABPB2-201ENST00000368916 ABCA5Q8WWZ7 1642 aa9.97□□□□□ -0.81
GABPB2-201ENST00000368916 SNPHO15079 494 aa9.97□□□□□ -0.81
GABPB2-201ENST00000368916 NBR1Q14596 966 aa9.97□□□□□ -0.81
GABPB2-201ENST00000368916 TSPYL2Q9H2G4 693 aaPredicted RBP9.97□□□□□ -0.81
GABPB2-201ENST00000368916 PRKRIP1Q9H875 184 aaPredicted RBP9.97□□□□□ -0.81
GABPB2-201ENST00000368916 CCDC61Q9Y6R9 512 aa9.97□□□□□ -0.81
GABPB2-201ENST00000368916 AKNAQ7Z591 1439 aa9.97□□□□□ -0.81
GABPB2-201ENST00000368916 RANGAP1P46060 587 aaPredicted RBP9.96□□□□□ -0.81
GABPB2-201ENST00000368916 CASKIN1Q8WXD9 1431 aa9.96□□□□□ -0.81
GABPB2-201ENST00000368916 NUDCQ9Y266 331 aa9.96□□□□□ -0.81
GABPB2-201ENST00000368916 HMGXB3Q12766 1538 aa9.96□□□□□ -0.82
GABPB2-201ENST00000368916 POLR1AO95602 1720 aaPredicted RBP9.96□□□□□ -0.82
GABPB2-201ENST00000368916 TIE1P35590 1138 aa9.96□□□□□ -0.82
GABPB2-201ENST00000368916 B4GALNT3Q6L9W6 998 aa9.96□□□□□ -0.82
GABPB2-201ENST00000368916 KTN1Q86UP2 1357 aaKnown RBP9.95□□□□□ -0.82
GABPB2-201ENST00000368916 BICRAQ9NZM4 1560 aa9.95□□□□□ -0.82
GABPB2-201ENST00000368916 NCOA1Q15788 1441 aa9.95□□□□□ -0.82
GABPB2-201ENST00000368916 KIF12Q96FN5 646 aa9.95□□□□□ -0.82
GABPB2-201ENST00000368916 RSPH6AQ9H0K4 717 aa9.95□□□□□ -0.82
GABPB2-201ENST00000368916 ANO8Q9HCE9 1232 aaPredicted RBP9.95□□□□□ -0.82
GABPB2-201ENST00000368916 PTPN23Q9H3S7 1636 aa9.94□□□□□ -0.82
GABPB2-201ENST00000368916 FGD6Q6ZV73 1430 aa9.94□□□□□ -0.82
GABPB2-201ENST00000368916 FGD5Q6ZNL6 1462 aa9.94□□□□□ -0.82
GABPB2-201ENST00000368916 GLIPR1L2Q4G1C9 344 aa9.93□□□□□ -0.82
GABPB2-201ENST00000368916 MRS2Q9HD23 443 aa9.93□□□□□ -0.82
GABPB2-201ENST00000368916 BMP2KQ9NSY1 1161 aaPredicted RBP9.93□□□□□ -0.82
GABPB2-201ENST00000368916 THOC2Q8NI27 1593 aaKnown RBP9.92□□□□□ -0.82
GABPB2-201ENST00000368916 IGF1RP08069 1367 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms