RNA–Protein interactions for RNA: ENST00000368450.5

SHC1-204, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-204ENST00000368450 KDM5BQ9UGL1 1544 aa19.95■□□□□ 0.78
SHC1-204ENST00000368450 RNF123Q5XPI4 1314 aa19.95■□□□□ 0.78
SHC1-204ENST00000368450 WASHC2CQ9Y4E1 1318 aa19.94■□□□□ 0.78
SHC1-204ENST00000368450 RRP1P56182 461 aaKnown RBP19.94■□□□□ 0.78
SHC1-204ENST00000368450 ARID3CA6NKF2 412 aa19.92■□□□□ 0.78
SHC1-204ENST00000368450 NFKBIBQ15653 356 aa19.92■□□□□ 0.78
SHC1-204ENST00000368450 FRAT1Q92837 279 aaPredicted RBP19.92■□□□□ 0.78
SHC1-204ENST00000368450 CFAP43Q8NDM7 1665 aa19.91■□□□□ 0.78
SHC1-204ENST00000368450 RCAN3Q9UKA8 241 aa19.91■□□□□ 0.78
SHC1-204ENST00000368450 DDRGK1Q96HY6 314 aa19.89■□□□□ 0.78
SHC1-204ENST00000368450 CASKIN1Q8WXD9 1431 aa19.89■□□□□ 0.77
SHC1-204ENST00000368450 PNISRQ8TF01 805 aaKnown RBP19.88■□□□□ 0.77
SHC1-204ENST00000368450 PLIN1O60240 522 aa19.88■□□□□ 0.77
SHC1-204ENST00000368450 FYCO1Q9BQS8 1478 aa19.87■□□□□ 0.77
SHC1-204ENST00000368450 SLC4A1APQ9BWU0 796 aaKnown RBP19.85■□□□□ 0.77
SHC1-204ENST00000368450 NCAPD3P42695 1498 aa19.85■□□□□ 0.77
SHC1-204ENST00000368450 FGD5Q6ZNL6 1462 aa19.83■□□□□ 0.77
SHC1-204ENST00000368450 MYOM3Q5VTT5 1437 aa19.83■□□□□ 0.77
SHC1-204ENST00000368450 MS4A1P11836 297 aa19.83■□□□□ 0.77
SHC1-204ENST00000368450 CDCA7LQ96GN5 454 aa19.78■□□□□ 0.76
SHC1-204ENST00000368450 CFTRP13569 1480 aa19.78■□□□□ 0.76
SHC1-204ENST00000368450 DHX29Q7Z478 1369 aaKnown RBP19.77■□□□□ 0.75
SHC1-204ENST00000368450 FRAT2O75474 233 aaPredicted RBP19.77■□□□□ 0.75
SHC1-204ENST00000368450 CRBNQ96SW2 442 aa19.75■□□□□ 0.75
SHC1-204ENST00000368450 DENND4BO75064 1496 aaPredicted RBP19.74■□□□□ 0.75
SHC1-204ENST00000368450 ARXQ96QS3 562 aa19.74■□□□□ 0.75
SHC1-204ENST00000368450 USP47Q96K76 1375 aa19.73■□□□□ 0.75
SHC1-204ENST00000368450 RSPH6AQ9H0K4 717 aa19.71■□□□□ 0.75
SHC1-204ENST00000368450 RGS3P49796 1198 aa19.7■□□□□ 0.74
SHC1-204ENST00000368450 SPATA31E1Q6ZUB1 1445 aa19.7■□□□□ 0.74
SHC1-204ENST00000368450 KDM2AQ9Y2K7 1162 aa19.7■□□□□ 0.74
SHC1-204ENST00000368450 ANKRD30BQ9BXX2 1392 aa19.68■□□□□ 0.74
SHC1-204ENST00000368450 CARD11Q9BXL7 1154 aa19.67■□□□□ 0.74
SHC1-204ENST00000368450 KDM6BO15054 1643 aa19.67■□□□□ 0.74
SHC1-204ENST00000368450 DCAF11Q8TEB1 546 aa19.67■□□□□ 0.74
SHC1-204ENST00000368450 MYBBP1AQ9BQG0 1328 aaKnown RBP19.66■□□□□ 0.74
SHC1-204ENST00000368450 EFCAB5A4FU69 1503 aa19.65■□□□□ 0.74
SHC1-204ENST00000368450 RPRD2Q5VT52 1461 aaKnown RBP19.64■□□□□ 0.74
SHC1-204ENST00000368450 FAM43AQ8N2R8 423 aa19.64■□□□□ 0.73
SHC1-204ENST00000368450 RAD54L2Q9Y4B4 1467 aa19.63■□□□□ 0.73
SHC1-204ENST00000368450 KIF15Q9NS87 1388 aa19.63■□□□□ 0.73
SHC1-204ENST00000368450 C20orf194Q5TEA3 1177 aa19.62■□□□□ 0.73
SHC1-204ENST00000368450 SNAPC4Q5SXM2 1469 aa19.61■□□□□ 0.73
SHC1-204ENST00000368450 ST20-MTHFSA0A0A6YYL1 179 aa19.61■□□□□ 0.73
SHC1-204ENST00000368450 PDE3BQ13370 1112 aa19.61■□□□□ 0.73
SHC1-204ENST00000368450 RALBP1Q15311 655 aa19.61■□□□□ 0.73
SHC1-204ENST00000368450 HECW1Q76N89 1606 aa19.6■□□□□ 0.73
SHC1-204ENST00000368450 FAM161AQ3B820 660 aa19.6■□□□□ 0.73
SHC1-204ENST00000368450 SUPT6HQ7KZ85 1726 aaKnown RBP19.6■□□□□ 0.73
SHC1-204ENST00000368450 CC2D1BQ5T0F9 858 aaKnown RBP19.59■□□□□ 0.73
SHC1-204ENST00000368450 BRD4O60885 1362 aaPredicted RBP19.59■□□□□ 0.73
SHC1-204ENST00000368450 TEX14Q8IWB6 1497 aa19.58■□□□□ 0.73
SHC1-204ENST00000368450 MIA2Q96PC5 1412 aa19.58■□□□□ 0.72
SHC1-204ENST00000368450 ZNF644Q9H582 1327 aaPredicted RBP19.57■□□□□ 0.72
SHC1-204ENST00000368450 NLRP13Q86W25 1043 aa19.57■□□□□ 0.72
SHC1-204ENST00000368450 PKNOX2Q96KN3 472 aa19.57■□□□□ 0.72
SHC1-204ENST00000368450 POGKQ9P215 609 aa19.57■□□□□ 0.72
SHC1-204ENST00000368450 SLKQ9H2G2 1235 aaPredicted RBP19.56■□□□□ 0.72
SHC1-204ENST00000368450 LRPPRCP42704 1394 aaKnown RBP19.56■□□□□ 0.72
SHC1-204ENST00000368450 PKD2Q13563 968 aa19.55■□□□□ 0.72
SHC1-204ENST00000368450 NAP1L5Q96NT1 182 aaPredicted RBP19.55■□□□□ 0.72
SHC1-204ENST00000368450 ROCK2O75116 1388 aaKnown RBP19.54■□□□□ 0.72
SHC1-204ENST00000368450 CADPSQ9ULU8 1353 aa19.54■□□□□ 0.72
SHC1-204ENST00000368450 GLIPR1L2Q4G1C9 344 aa19.54■□□□□ 0.72
SHC1-204ENST00000368450 ZNF777Q9ULD5 760 aaPredicted RBP19.53■□□□□ 0.72
SHC1-204ENST00000368450 EHBP1L1Q8N3D4 1523 aa19.53■□□□□ 0.72
SHC1-204ENST00000368450 CENPQQ7L2Z9 268 aaPredicted RBP19.52■□□□□ 0.72
SHC1-204ENST00000368450 VSIG10Q8N0Z9 540 aa19.52■□□□□ 0.72
SHC1-204ENST00000368450 HMGXB3Q12766 1538 aa19.52■□□□□ 0.72
SHC1-204ENST00000368450 C8orf34Q49A92 452 aa19.52■□□□□ 0.71
SHC1-204ENST00000368450 BCORL1Q5H9F3 1711 aa19.51■□□□□ 0.71
SHC1-204ENST00000368450 ABCA5Q8WWZ7 1642 aa19.51■□□□□ 0.71
SHC1-204ENST00000368450 UGGT2Q9NYU1 1516 aa19.51■□□□□ 0.71
SHC1-204ENST00000368450 ARID4BQ4LE39 1312 aaPredicted RBP19.51■□□□□ 0.71
SHC1-204ENST00000368450 KTN1Q86UP2 1357 aaKnown RBP19.5■□□□□ 0.71
SHC1-204ENST00000368450 RRAGDQ9NQL2 400 aaPredicted RBP19.5■□□□□ 0.71
SHC1-204ENST00000368450 GCC2Q8IWJ2 1684 aa19.48■□□□□ 0.71
SHC1-204ENST00000368450 GRIN2BQ13224 1484 aa19.48■□□□□ 0.71
SHC1-204ENST00000368450 TDRD9Q8NDG6 1382 aaKnown RBP19.47■□□□□ 0.71
SHC1-204ENST00000368450 MAGI3Q5TCQ9 1506 aa19.47■□□□□ 0.71
SHC1-204ENST00000368450 GZF1Q9H116 711 aaPredicted RBP19.45■□□□□ 0.7
SHC1-204ENST00000368450 LRRIQ1Q96JM4 1722 aa19.43■□□□□ 0.7
SHC1-204ENST00000368450 SPRYD3Q8NCJ5 442 aa19.43■□□□□ 0.7
SHC1-204ENST00000368450 TCOF1Q13428 1488 aaKnown RBP19.43■□□□□ 0.7
SHC1-204ENST00000368450 POLR1AO95602 1720 aaPredicted RBP19.43■□□□□ 0.7
SHC1-204ENST00000368450 KDM2BQ8NHM5 1336 aa19.43■□□□□ 0.7
SHC1-204ENST00000368450 L1TD1Q5T7N2 865 aaKnown RBP19.42■□□□□ 0.7
SHC1-204ENST00000368450 PNNQ9H307 717 aaKnown RBP19.42■□□□□ 0.7
SHC1-204ENST00000368450 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.42■□□□□ 0.7
SHC1-204ENST00000368450 DAPK1P53355 1430 aa19.41■□□□□ 0.7
SHC1-204ENST00000368450 BECN1Q14457 450 aa19.4■□□□□ 0.7
SHC1-204ENST00000368450 CTTNBP2Q8WZ74 1663 aa19.4■□□□□ 0.7
SHC1-204ENST00000368450 HSP90AA2PQ14568 343 aaPredicted RBP19.39■□□□□ 0.69
SHC1-204ENST00000368450 ZMYND15Q9H091 742 aa19.38■□□□□ 0.69
SHC1-204ENST00000368450 RGL3Q3MIN7 710 aa19.38■□□□□ 0.69
SHC1-204ENST00000368450 ADAMTS8Q9UP79 889 aa19.38■□□□□ 0.69
SHC1-204ENST00000368450 FANCD2Q9BXW9 1451 aa19.38■□□□□ 0.69
SHC1-204ENST00000368450 ABCC5O15440 1437 aa19.37■□□□□ 0.69
SHC1-204ENST00000368450 CDK13Q14004 1512 aaKnown RBP19.37■□□□□ 0.69
SHC1-204ENST00000368450 POLA1P09884 1462 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms