RNA–Protein interactions for RNA: ENST00000368408.3

EFNA3-201, Transcript of ephrin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3-201ENST00000368408 CFDP1Q9UEE9 299 aaPredicted RBP38.21■■■■□ 3.71
EFNA3-201ENST00000368408 CDC42BPAQ5VT25 1732 aa38.2■■■■□ 3.71
EFNA3-201ENST00000368408 UHRF1BP1LA0JNW5 1464 aa38.18■■■■□ 3.7
EFNA3-201ENST00000368408 ZNF644Q9H582 1327 aaPredicted RBP38.18■■■■□ 3.7
EFNA3-201ENST00000368408 ACIN1Q9UKV3 1341 aaKnown RBP38.17■■■■□ 3.7
EFNA3-201ENST00000368408 CHIC2Q9UKJ5 165 aa38.14■■■■□ 3.7
EFNA3-201ENST00000368408 RRP7BPQ9NSQ0 103 aa38.13■■■■□ 3.69
EFNA3-201ENST00000368408 TIMELESSQ9UNS1 1208 aa38.13■■■■□ 3.69
EFNA3-201ENST00000368408 CROCC2H7BZ55 1655 aa38.07■■■■□ 3.69
EFNA3-201ENST00000368408 RIMBP3CA6NJZ7 1639 aa38.07■■■■□ 3.69
EFNA3-201ENST00000368408 RIMBP3BA6NNM3 1639 aa38.07■■■■□ 3.69
EFNA3-201ENST00000368408 RIMBP3Q9UFD9 1639 aa38.07■■■■□ 3.69
EFNA3-201ENST00000368408 ADGRL2O95490 1459 aa38.06■■■■□ 3.68
EFNA3-201ENST00000368408 KDM6BO15054 1643 aa38.05■■■■□ 3.68
EFNA3-201ENST00000368408 ADGBQ8N7X0 1667 aa38.04■■■■□ 3.68
EFNA3-201ENST00000368408 KDM5BQ9UGL1 1544 aa38.02■■■■□ 3.68
EFNA3-201ENST00000368408 DIEXFQ68CQ4 756 aaKnown RBP38.01■■■■□ 3.68
EFNA3-201ENST00000368408 PREX2Q70Z35 1606 aa38■■■■□ 3.67
EFNA3-201ENST00000368408 SHANK2Q9UPX8 1470 aa37.98■■■■□ 3.67
EFNA3-201ENST00000368408 SIN3AQ96ST3 1273 aa37.97■■■■□ 3.67
EFNA3-201ENST00000368408 NCOA1Q15788 1441 aa37.96■■■■□ 3.67
EFNA3-201ENST00000368408 ZCCHC11Q5TAX3 1644 aaKnown RBP37.95■■■■□ 3.67
EFNA3-201ENST00000368408 ARHGEF5Q12774 1597 aa37.94■■■■□ 3.66
EFNA3-201ENST00000368408 CDC42BPBQ9Y5S2 1711 aa37.93■■■■□ 3.66
EFNA3-201ENST00000368408 ZNF777Q9ULD5 760 aaPredicted RBP37.92■■■■□ 3.66
EFNA3-201ENST00000368408 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.91■■■■□ 3.66
EFNA3-201ENST00000368408 DENND4BO75064 1496 aaPredicted RBP37.9■■■■□ 3.66
EFNA3-201ENST00000368408 TTC37Q6PGP7 1564 aa37.88■■■■□ 3.65
EFNA3-201ENST00000368408 ANKRD30AQ9BXX3 1397 aa37.85■■■■□ 3.65
EFNA3-201ENST00000368408 MBD5Q9P267 1494 aa37.85■■■■□ 3.65
EFNA3-201ENST00000368408 SAMD9LQ8IVG5 1584 aa37.85■■■■□ 3.65
EFNA3-201ENST00000368408 NEUROD1Q13562 356 aa37.85■■■■□ 3.65
EFNA3-201ENST00000368408 CYB5RLQ6IPT4 315 aa37.81■■■■□ 3.64
EFNA3-201ENST00000368408 TRIM52Q96A61 297 aa37.8■■■■□ 3.64
EFNA3-201ENST00000368408 C9orf84Q5VXU9 1444 aa37.8■■■■□ 3.64
EFNA3-201ENST00000368408 MYO5CQ9NQX4 1742 aa37.8■■■■□ 3.64
EFNA3-201ENST00000368408 RSPH4AQ5TD94 716 aa37.79■■■■□ 3.64
EFNA3-201ENST00000368408 MPHOSPH9Q99550 1183 aa37.79■■■■□ 3.64
EFNA3-201ENST00000368408 PPP1R15AO75807 674 aaPredicted RBP37.75■■■■□ 3.63
EFNA3-201ENST00000368408 CCDC141Q6ZP82 1450 aa37.75■■■■□ 3.63
EFNA3-201ENST00000368408 PLEKHH2Q8IVE3 1493 aa37.73■■■■□ 3.63
EFNA3-201ENST00000368408 ARHGAP5Q13017 1502 aa37.72■■■■□ 3.63
EFNA3-201ENST00000368408 KIAA1107Q9UPP5 1409 aa37.71■■■■□ 3.63
EFNA3-201ENST00000368408 TONSLQ96HA7 1378 aa37.71■■■■□ 3.63
EFNA3-201ENST00000368408 TSPY4P0CV99 314 aa37.7■■■■□ 3.63
EFNA3-201ENST00000368408 TSPY10P0CW01 314 aa37.7■■■■□ 3.63
EFNA3-201ENST00000368408 PLCH2O75038 1416 aa37.69■■■■□ 3.62
EFNA3-201ENST00000368408 MAST1Q9Y2H9 1570 aa37.68■■■■□ 3.62
EFNA3-201ENST00000368408 ANKRD50Q9ULJ7 1429 aa37.67■■■■□ 3.62
EFNA3-201ENST00000368408 HNRNPMP52272 730 aaKnown RBP eCLIP37.67■■■■□ 3.62
EFNA3-201ENST00000368408 PZPP20742 1482 aa37.65■■■■□ 3.62
EFNA3-201ENST00000368408 ARAP3Q8WWN8 1544 aa37.65■■■■□ 3.62
EFNA3-201ENST00000368408 SYCP2Q9BX26 1530 aa37.62■■■■□ 3.61
EFNA3-201ENST00000368408 ANKRD30BQ9BXX2 1392 aa37.61■■■■□ 3.61
EFNA3-201ENST00000368408 WDR7Q9Y4E6 1490 aa37.6■■■■□ 3.61
EFNA3-201ENST00000368408 KCNH8Q96L42 1107 aa37.6■■■■□ 3.61
EFNA3-201ENST00000368408 KDM5DQ9BY66 1539 aa37.56■■■■□ 3.6
EFNA3-201ENST00000368408 KIF15Q9NS87 1388 aa37.56■■■■□ 3.6
EFNA3-201ENST00000368408 SLC4A1APQ9BWU0 796 aaKnown RBP37.53■■■■□ 3.6
EFNA3-201ENST00000368408 EFCAB2Q5VUJ9 269 aa37.52■■■■□ 3.6
EFNA3-201ENST00000368408 RPRD2Q5VT52 1461 aaKnown RBP37.5■■■■□ 3.59
EFNA3-201ENST00000368408 PLXNC1O60486 1568 aa37.49■■■■□ 3.59
EFNA3-201ENST00000368408 ABCC1P33527 1531 aa37.49■■■■□ 3.59
EFNA3-201ENST00000368408 ARHGEF12Q9NZN5 1544 aa37.48■■■■□ 3.59
EFNA3-201ENST00000368408 ABCA9Q8IUA7 1624 aa37.47■■■■□ 3.59
EFNA3-201ENST00000368408 FOXD1Q16676 465 aa37.42■■■■□ 3.58
EFNA3-201ENST00000368408 ASXL2Q76L83 1435 aa37.41■■■■□ 3.58
EFNA3-201ENST00000368408 NUP155O75694 1391 aa37.37■■■■□ 3.57
EFNA3-201ENST00000368408 TEX14Q8IWB6 1497 aa37.33■■■■□ 3.57
EFNA3-201ENST00000368408 DUOX2Q9NRD8 1548 aa37.32■■■■□ 3.57
EFNA3-201ENST00000368408 UNC13BO14795 1591 aa37.32■■■■□ 3.56
EFNA3-201ENST00000368408 MIER1Q8N108 512 aa37.32■■■■□ 3.56
EFNA3-201ENST00000368408 PKD2Q13563 968 aa37.3■■■■□ 3.56
EFNA3-201ENST00000368408 RTEL1-TNFRSF6BF6WH68 1400 aa37.29■■■■□ 3.56
EFNA3-201ENST00000368408 TRAPPC8Q9Y2L5 1435 aa37.29■■■■□ 3.56
EFNA3-201ENST00000368408 L3MBTL2Q969R5 705 aa37.28■■■■□ 3.56
EFNA3-201ENST00000368408 NPM1P06748 294 aaKnown RBP eCLIP37.27■■■■□ 3.56
EFNA3-201ENST00000368408 ERBINQ96RT1 1412 aa37.26■■■■□ 3.55
EFNA3-201ENST00000368408 FANCAO15360 1455 aa37.25■■■■□ 3.55
EFNA3-201ENST00000368408 FAM135AQ9P2D6 1515 aa37.22■■■■□ 3.55
EFNA3-201ENST00000368408 MAGI2Q86UL8 1455 aa37.2■■■■□ 3.55
EFNA3-201ENST00000368408 ZFYVE16Q7Z3T8 1539 aa37.17■■■■□ 3.54
EFNA3-201ENST00000368408 IQGAP3Q86VI3 1631 aa37.16■■■■□ 3.54
EFNA3-201ENST00000368408 SPAG9O60271 1321 aaKnown RBP37.13■■■■□ 3.53
EFNA3-201ENST00000368408 INO80Q9ULG1 1556 aaPredicted RBP37.12■■■■□ 3.53
EFNA3-201ENST00000368408 ADGRL1O94910 1474 aa37.1■■■■□ 3.53
EFNA3-201ENST00000368408 CFAP74Q9C0B2 1584 aa37.06■■■■□ 3.52
EFNA3-201ENST00000368408 AFAP1Q8N556 730 aa37.06■■■■□ 3.52
EFNA3-201ENST00000368408 SCAPERQ9BY12 1400 aa37.05■■■■□ 3.52
EFNA3-201ENST00000368408 ATP7AQ04656 1500 aa37.04■■■■□ 3.52
EFNA3-201ENST00000368408 PELP1Q8IZL8 1130 aaKnown RBP37.04■■■■□ 3.52
EFNA3-201ENST00000368408 NBPF8Q3BBV2 869 aa37.01■■■■□ 3.52
EFNA3-201ENST00000368408 CD109Q6YHK3 1445 aa36.99■■■■□ 3.51
EFNA3-201ENST00000368408 ATP10AO60312 1499 aa36.97■■■■□ 3.51
EFNA3-201ENST00000368408 UHRF1BP1Q6BDS2 1440 aa36.97■■■■□ 3.51
EFNA3-201ENST00000368408 DEPDC5O75140 1603 aa36.96■■■■□ 3.51
EFNA3-201ENST00000368408 EIF4G2P78344 907 aaKnown RBP eCLIP36.96■■■■□ 3.51
EFNA3-201ENST00000368408 HIRIP3Q9BW71 556 aaPredicted RBP36.95■■■■□ 3.51
EFNA3-201ENST00000368408 HSPA5P11021 654 aaKnown RBP36.93■■■■□ 3.5
EFNA3-201ENST00000368408 TRHP20396 242 aaPredicted RBP36.92■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms