RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 PLEKHD1A6NEE1 506 aa15.58■□□□□ 0.08
TPR-201ENST00000367478 HSP90AA2PQ14568 343 aaPredicted RBP15.58■□□□□ 0.08
TPR-201ENST00000367478 TSR1Q2NL82 804 aaKnown RBP15.57■□□□□ 0.08
TPR-201ENST00000367478 U2SURPO15042 1029 aaKnown RBP15.57■□□□□ 0.08
TPR-201ENST00000367478 PLEKHG5O94827 1062 aa15.57■□□□□ 0.08
TPR-201ENST00000367478 RGL3Q3MIN7 710 aa15.57■□□□□ 0.08
TPR-201ENST00000367478 TCERG1O14776 1098 aaKnown RBP15.56■□□□□ 0.08
TPR-201ENST00000367478 CHMP7Q8WUX9 453 aaPredicted RBP15.56■□□□□ 0.08
TPR-201ENST00000367478 TMF1P82094 1093 aa15.56■□□□□ 0.08
TPR-201ENST00000367478 RTF1Q92541 710 aaKnown RBP15.56■□□□□ 0.08
TPR-201ENST00000367478 HDGFP51858 240 aaKnown RBP15.56■□□□□ 0.08
TPR-201ENST00000367478 B4GALNT3Q6L9W6 998 aa15.56■□□□□ 0.08
TPR-201ENST00000367478 RWDD1Q9H446 243 aaPredicted RBP15.56■□□□□ 0.08
TPR-201ENST00000367478 GOLGA3Q08378 1498 aa15.55■□□□□ 0.08
TPR-201ENST00000367478 SCRIBQ14160 1630 aa15.55■□□□□ 0.08
TPR-201ENST00000367478 TMX4Q9H1E5 349 aaPredicted RBP15.53■□□□□ 0.08
TPR-201ENST00000367478 CCER2I3L3R5 266 aa15.53■□□□□ 0.08
TPR-201ENST00000367478 PMFBP1Q8TBY8 1022 aa15.53■□□□□ 0.08
TPR-201ENST00000367478 ZCCHC6Q5VYS8 1495 aaKnown RBP15.52■□□□□ 0.08
TPR-201ENST00000367478 TPM1P09493 284 aa15.52■□□□□ 0.07
TPR-201ENST00000367478 DDX11L8A8MPP1 907 aa15.51■□□□□ 0.07
TPR-201ENST00000367478 TEX35Q5T0J7 233 aa15.5■□□□□ 0.07
TPR-201ENST00000367478 SPRYD3Q8NCJ5 442 aa15.5■□□□□ 0.07
TPR-201ENST00000367478 TIMELESSQ9UNS1 1208 aa15.5■□□□□ 0.07
TPR-201ENST00000367478 KANK1Q14678 1352 aa15.5■□□□□ 0.07
TPR-201ENST00000367478 RRP12Q5JTH9 1297 aaKnown RBP15.49■□□□□ 0.07
TPR-201ENST00000367478 TPM2P07951 284 aa15.49■□□□□ 0.07
TPR-201ENST00000367478 RASSF8Q8NHQ8 419 aa15.49■□□□□ 0.07
TPR-201ENST00000367478 RBM19Q9Y4C8 960 aaKnown RBP15.49■□□□□ 0.07
TPR-201ENST00000367478 LMOD2Q6P5Q4 547 aa15.49■□□□□ 0.07
TPR-201ENST00000367478 GZF1Q9H116 711 aaPredicted RBP15.49■□□□□ 0.07
TPR-201ENST00000367478 ATP6V1DQ9Y5K8 247 aa15.49■□□□□ 0.07
TPR-201ENST00000367478 ST18O60284 1047 aa15.48■□□□□ 0.07
TPR-201ENST00000367478 HMMRO75330 724 aa15.48■□□□□ 0.07
TPR-201ENST00000367478 CFDP1Q9UEE9 299 aaPredicted RBP15.48■□□□□ 0.07
TPR-201ENST00000367478 CC2D1BQ5T0F9 858 aaKnown RBP15.47■□□□□ 0.07
TPR-201ENST00000367478 NOM1Q5C9Z4 860 aaKnown RBP15.46■□□□□ 0.07
TPR-201ENST00000367478 SKOR2Q2VWA4 1001 aaPredicted RBP15.46■□□□□ 0.07
TPR-201ENST00000367478 ARID3AQ99856 593 aa15.46■□□□□ 0.07
TPR-201ENST00000367478 KIF16BQ96L93 1317 aa15.46■□□□□ 0.06
TPR-201ENST00000367478 KTN1Q86UP2 1357 aaKnown RBP15.45■□□□□ 0.06
TPR-201ENST00000367478 GOLGA6L19H0YKK7 550 aa15.45■□□□□ 0.06
TPR-201ENST00000367478 HSP90B1P14625 803 aaKnown RBP15.45■□□□□ 0.06
TPR-201ENST00000367478 MORC1Q86VD1 984 aa15.43■□□□□ 0.06
TPR-201ENST00000367478 TPD52L1Q16890 204 aaPredicted RBP15.43■□□□□ 0.06
TPR-201ENST00000367478 GORABQ5T7V8 394 aa15.43■□□□□ 0.06
TPR-201ENST00000367478 CDR1P51861 262 aa15.43■□□□□ 0.06
TPR-201ENST00000367478 SPAG9O60271 1321 aaKnown RBP15.42■□□□□ 0.06
TPR-201ENST00000367478 IPO9Q96P70 1041 aaKnown RBP15.42■□□□□ 0.06
TPR-201ENST00000367478 IPO7O95373 1038 aaKnown RBP15.42■□□□□ 0.06
TPR-201ENST00000367478 SLKQ9H2G2 1235 aaPredicted RBP15.41■□□□□ 0.06
TPR-201ENST00000367478 SF3A1Q15459 793 aaKnown RBP15.41■□□□□ 0.06
TPR-201ENST00000367478 RCAN3Q9UKA8 241 aa15.4■□□□□ 0.06
TPR-201ENST00000367478 CEP162Q5TB80 1403 aa15.4■□□□□ 0.06
TPR-201ENST00000367478 ZNF771Q7L3S4 317 aaPredicted RBP15.39■□□□□ 0.05
TPR-201ENST00000367478 KCNH8Q96L42 1107 aa15.39■□□□□ 0.05
TPR-201ENST00000367478 ITPRIPQ8IWB1 547 aa15.39■□□□□ 0.05
TPR-201ENST00000367478 PHLDB1Q86UU1 1377 aa15.38■□□□□ 0.05
TPR-201ENST00000367478 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.38■□□□□ 0.05
TPR-201ENST00000367478 STK31Q9BXU1 1019 aa15.38■□□□□ 0.05
TPR-201ENST00000367478 FHAD1B1AJZ9 1412 aa15.38■□□□□ 0.05
TPR-201ENST00000367478 RALBP1Q15311 655 aa15.38■□□□□ 0.05
TPR-201ENST00000367478 ANKRD20A12PQ8NF67 263 aa15.38■□□□□ 0.05
TPR-201ENST00000367478 TRIM6-TRIM34B2RNG4 842 aa15.38■□□□□ 0.05
TPR-201ENST00000367478 ACBD3Q9H3P7 528 aa15.38■□□□□ 0.05
TPR-201ENST00000367478 HDGFL2Q7Z4V5 671 aaPredicted RBP15.37■□□□□ 0.05
TPR-201ENST00000367478 HOOK1Q9UJC3 728 aaKnown RBP15.37■□□□□ 0.05
TPR-201ENST00000367478 SRPK2P78362 688 aaKnown RBP15.37■□□□□ 0.05
TPR-201ENST00000367478 CREBRFQ8IUR6 639 aa15.37■□□□□ 0.05
TPR-201ENST00000367478 LRRFIP1Q32MZ4 808 aaKnown RBP15.36■□□□□ 0.05
TPR-201ENST00000367478 BECN2A8MW95 431 aa15.36■□□□□ 0.05
TPR-201ENST00000367478 AK7Q96M32 723 aa15.36■□□□□ 0.05
TPR-201ENST00000367478 TAF7LQ5H9L4 462 aa15.36■□□□□ 0.05
TPR-201ENST00000367478 CEP164Q9UPV0 1460 aa15.35■□□□□ 0.05
TPR-201ENST00000367478 MARCH6O60337 910 aa15.35■□□□□ 0.05
TPR-201ENST00000367478 PES1O00541 588 aaKnown RBP15.35■□□□□ 0.05
TPR-201ENST00000367478 MTERF4Q7Z6M4 381 aaKnown RBP15.35■□□□□ 0.05
TPR-201ENST00000367478 EIF3AQ14152 1382 aaKnown RBP15.35■□□□□ 0.05
TPR-201ENST00000367478 H3BQV1 296 aa15.34■□□□□ 0.05
TPR-201ENST00000367478 IFFO2Q5TF58 517 aa15.34■□□□□ 0.05
TPR-201ENST00000367478 CCAR2Q8N163 923 aaKnown RBP15.34■□□□□ 0.05
TPR-201ENST00000367478 SENP3Q9H4L4 574 aaPredicted RBP15.33■□□□□ 0.05
TPR-201ENST00000367478 LMOD3Q0VAK6 560 aa15.33■□□□□ 0.04
TPR-201ENST00000367478 RUFY1Q96T51 708 aa15.32■□□□□ 0.04
TPR-201ENST00000367478 PDE4CQ08493 712 aa15.32■□□□□ 0.04
TPR-201ENST00000367478 DCTN1Q14203 1278 aa15.32■□□□□ 0.04
TPR-201ENST00000367478 ARGLU1Q9NWB6 273 aaPredicted RBP15.32■□□□□ 0.04
TPR-201ENST00000367478 APBB1O00213 710 aa15.32■□□□□ 0.04
TPR-201ENST00000367478 MFAP1P55081 439 aaKnown RBP15.32■□□□□ 0.04
TPR-201ENST00000367478 CCDC47Q96A33 483 aaKnown RBP15.31■□□□□ 0.04
TPR-201ENST00000367478 AKAP17AQ02040 695 aaKnown RBP15.31■□□□□ 0.04
TPR-201ENST00000367478 CWC15Q9P013 229 aaKnown RBP15.31■□□□□ 0.04
TPR-201ENST00000367478 KIF27Q86VH2 1401 aa15.31■□□□□ 0.04
TPR-201ENST00000367478 CCDC191Q8NCU4 936 aa15.31■□□□□ 0.04
TPR-201ENST00000367478 SENP3-EIF4A1A0A087X0R7 540 aa15.3■□□□□ 0.04
TPR-201ENST00000367478 DCAF11Q8TEB1 546 aa15.3■□□□□ 0.04
TPR-201ENST00000367478 FAM184AQ8NB25 1140 aa15.29■□□□□ 0.04
TPR-201ENST00000367478 CPLX2Q6PUV4 134 aaKnown RBP15.29■□□□□ 0.04
TPR-201ENST00000367478 PDE3BQ13370 1112 aa15.29■□□□□ 0.04
TPR-201ENST00000367478 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms