RNA–Protein interactions for RNA: ENST00000367378.5

PCMT1-201, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCMT1, Length 1,293 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-201ENST00000367378 FER1L4A9Z1Z3 1794 aa35.95■■■■□ 3.35
PCMT1-201ENST00000367378 MLECQ14165 292 aa35.95■■■■□ 3.35
PCMT1-201ENST00000367378 EHMT2Q96KQ7 1210 aa35.91■■■■□ 3.34
PCMT1-201ENST00000367378 MYO5CQ9NQX4 1742 aa35.9■■■■□ 3.34
PCMT1-201ENST00000367378 ATP1B4Q9UN42 357 aaPredicted RBP35.89■■■■□ 3.34
PCMT1-201ENST00000367378 FMN1Q68DA7 1419 aa35.85■■■■□ 3.33
PCMT1-201ENST00000367378 ATP10AO60312 1499 aa35.85■■■■□ 3.33
PCMT1-201ENST00000367378 KIF14Q15058 1648 aa35.84■■■■□ 3.33
PCMT1-201ENST00000367378 UBTFP17480 764 aaKnown RBP35.84■■■■□ 3.33
PCMT1-201ENST00000367378 ARHGAP35Q9NRY4 1499 aa35.84■■■■□ 3.33
PCMT1-201ENST00000367378 EFCAB2Q5VUJ9 269 aa35.82■■■■□ 3.32
PCMT1-201ENST00000367378 ARHGEF12Q9NZN5 1544 aa35.82■■■■□ 3.32
PCMT1-201ENST00000367378 C9orf84Q5VXU9 1444 aa35.8■■■■□ 3.32
PCMT1-201ENST00000367378 CDK11AQ9UQ88 783 aaPredicted RBP35.76■■■■□ 3.32
PCMT1-201ENST00000367378 LRRIQ1Q96JM4 1722 aa35.75■■■■□ 3.31
PCMT1-201ENST00000367378 TROQ12816 1431 aaPredicted RBP35.72■■■■□ 3.31
PCMT1-201ENST00000367378 PREX1Q8TCU6 1659 aa35.72■■■■□ 3.31
PCMT1-201ENST00000367378 ZNF518AQ6AHZ1 1483 aa35.71■■■■□ 3.31
PCMT1-201ENST00000367378 ARHGAP5Q13017 1502 aa35.71■■■■□ 3.31
PCMT1-201ENST00000367378 CEBPAP49715 358 aaPredicted RBP35.7■■■■□ 3.31
PCMT1-201ENST00000367378 AFAP1Q8N556 730 aa35.7■■■■□ 3.31
PCMT1-201ENST00000367378 KDM5CP41229 1560 aa35.69■■■■□ 3.3
PCMT1-201ENST00000367378 CERKQ8TCT0 537 aa35.68■■■■□ 3.3
PCMT1-201ENST00000367378 CDC42BPBQ9Y5S2 1711 aa35.65■■■■□ 3.3
PCMT1-201ENST00000367378 CLIP1P30622 1438 aa35.63■■■■□ 3.29
PCMT1-201ENST00000367378 DIP2CQ9Y2E4 1556 aa35.63■■■■□ 3.29
PCMT1-201ENST00000367378 STRCQ7RTU9 1775 aa35.59■■■■□ 3.29
PCMT1-201ENST00000367378 MYT1LQ9UL68 1186 aa35.58■■■■□ 3.29
PCMT1-201ENST00000367378 ABCA6Q8N139 1617 aa35.57■■■■□ 3.29
PCMT1-201ENST00000367378 REREQ9P2R6 1566 aa35.55■■■■□ 3.28
PCMT1-201ENST00000367378 PREX2Q70Z35 1606 aa35.54■■■■□ 3.28
PCMT1-201ENST00000367378 SETD1BQ9UPS6 1966 aaKnown RBP35.53■■■■□ 3.28
PCMT1-201ENST00000367378 CHIC1Q5VXU3 224 aa35.53■■■■□ 3.28
PCMT1-201ENST00000367378 MLH3Q9UHC1 1453 aa35.52■■■■□ 3.28
PCMT1-201ENST00000367378 ABCC1P33527 1531 aa35.5■■■■□ 3.27
PCMT1-201ENST00000367378 C3P01024 1663 aa35.49■■■■□ 3.27
PCMT1-201ENST00000367378 UHRF1BP1Q6BDS2 1440 aa35.49■■■■□ 3.27
PCMT1-201ENST00000367378 TRAPPC8Q9Y2L5 1435 aa35.49■■■■□ 3.27
PCMT1-201ENST00000367378 ITSN2Q9NZM3 1697 aa35.49■■■■□ 3.27
PCMT1-201ENST00000367378 AGLP35573 1532 aa35.44■■■■□ 3.26
PCMT1-201ENST00000367378 CASKIN1Q8WXD9 1431 aa35.44■■■■□ 3.26
PCMT1-201ENST00000367378 DMRT2Q9Y5R5 561 aa35.43■■■■□ 3.26
PCMT1-201ENST00000367378 CDC42BPAQ5VT25 1732 aa35.43■■■■□ 3.26
PCMT1-201ENST00000367378 CCDC18Q5T9S5 1454 aa35.42■■■■□ 3.26
PCMT1-201ENST00000367378 KIDINS220Q9ULH0 1771 aa35.42■■■■□ 3.26
PCMT1-201ENST00000367378 ESF1Q9H501 851 aaKnown RBP35.33■■■■□ 3.25
PCMT1-201ENST00000367378 PTPRTO14522 1441 aa35.3■■■■□ 3.24
PCMT1-201ENST00000367378 SAMD9LQ8IVG5 1584 aa35.29■■■■□ 3.24
PCMT1-201ENST00000367378 FYCO1Q9BQS8 1478 aa35.27■■■■□ 3.24
PCMT1-201ENST00000367378 CNTLNQ9NXG0 1405 aa35.25■■■■□ 3.23
PCMT1-201ENST00000367378 ZNF777Q9ULD5 760 aaPredicted RBP35.25■■■■□ 3.23
PCMT1-201ENST00000367378 SYCP2Q9BX26 1530 aa35.23■■■■□ 3.23
PCMT1-201ENST00000367378 GPATCH8Q9UKJ3 1502 aaKnown RBP35.22■■■■□ 3.23
PCMT1-201ENST00000367378 MROH2AA6NES4 1674 aa35.21■■■■□ 3.23
PCMT1-201ENST00000367378 SUPT6HQ7KZ85 1726 aaKnown RBP35.2■■■■□ 3.23
PCMT1-201ENST00000367378 NCOA1Q15788 1441 aa35.19■■■■□ 3.22
PCMT1-201ENST00000367378 LTBP4Q8N2S1 1624 aa35.19■■■■□ 3.22
PCMT1-201ENST00000367378 HNRNPMP52272 730 aaKnown RBP eCLIP35.18■■■■□ 3.22
PCMT1-201ENST00000367378 SPAG9O60271 1321 aaKnown RBP35.16■■■■□ 3.22
PCMT1-201ENST00000367378 DISP3Q9P2K9 1392 aa35.13■■■■□ 3.21
PCMT1-201ENST00000367378 NPATQ14207 1427 aa35.13■■■■□ 3.21
PCMT1-201ENST00000367378 CAMSAP1Q5T5Y3 1602 aa35.13■■■■□ 3.21
PCMT1-201ENST00000367378 ZMYM3Q14202 1370 aa35.13■■■■□ 3.21
PCMT1-201ENST00000367378 ATP7AQ04656 1500 aa35.12■■■■□ 3.21
PCMT1-201ENST00000367378 CLTCQ00610 1675 aaKnown RBP35.11■■■■□ 3.21
PCMT1-201ENST00000367378 INO80Q9ULG1 1556 aaPredicted RBP35.1■■■■□ 3.21
PCMT1-201ENST00000367378 ILDR2Q71H61 639 aa35.09■■■■□ 3.21
PCMT1-201ENST00000367378 PLXNC1O60486 1568 aa35.08■■■■□ 3.21
PCMT1-201ENST00000367378 KIAA1107Q9UPP5 1409 aa35.07■■■■□ 3.21
PCMT1-201ENST00000367378 CFDP1Q9UEE9 299 aaPredicted RBP35.06■■■■□ 3.2
PCMT1-201ENST00000367378 A2MP01023 1474 aa35.04■■■■□ 3.2
PCMT1-201ENST00000367378 IQSEC2Q5JU85 1478 aa35.03■■■■□ 3.2
PCMT1-201ENST00000367378 PLEKHH2Q8IVE3 1493 aa35.03■■■■□ 3.2
PCMT1-201ENST00000367378 CCNB3Q8WWL7 1395 aa35.03■■■■□ 3.2
PCMT1-201ENST00000367378 NCKAP5LQ9HCH0 1330 aa35.02■■■■□ 3.2
PCMT1-201ENST00000367378 MYO3AQ8NEV4 1616 aa35.01■■■■□ 3.19
PCMT1-201ENST00000367378 ZNF142P52746 1687 aaPredicted RBP34.99■■■■□ 3.19
PCMT1-201ENST00000367378 PTPRKQ15262 1439 aa34.97■■■■□ 3.19
PCMT1-201ENST00000367378 GGT6Q6P531 493 aa34.96■■■■□ 3.19
PCMT1-201ENST00000367378 SPATA31D1Q6ZQQ2 1576 aa34.96■■■■□ 3.19
PCMT1-201ENST00000367378 MTUS2Q5JR59 1369 aa34.95■■■■□ 3.19
PCMT1-201ENST00000367378 ADGBQ8N7X0 1667 aa34.95■■■■□ 3.18
PCMT1-201ENST00000367378 CEP170BQ9Y4F5 1589 aaPredicted RBP34.93■■■■□ 3.18
PCMT1-201ENST00000367378 ZNF335Q9H4Z2 1342 aaPredicted RBP34.93■■■■□ 3.18
PCMT1-201ENST00000367378 ZNF644Q9H582 1327 aaPredicted RBP34.93■■■■□ 3.18
PCMT1-201ENST00000367378 TIAM1Q13009 1591 aa34.91■■■■□ 3.18
PCMT1-201ENST00000367378 PLA2R1Q13018 1463 aa34.9■■■■□ 3.18
PCMT1-201ENST00000367378 SOCS7O14512 581 aa34.89■■■■□ 3.18
PCMT1-201ENST00000367378 TCOF1Q13428 1488 aaKnown RBP34.87■■■■□ 3.17
PCMT1-201ENST00000367378 MBD5Q9P267 1494 aa34.87■■■■□ 3.17
PCMT1-201ENST00000367378 PKD2Q13563 968 aa34.86■■■■□ 3.17
PCMT1-201ENST00000367378 PPP6R1Q9UPN7 881 aa34.83■■■■□ 3.17
PCMT1-201ENST00000367378 EHBP1L1Q8N3D4 1523 aa34.81■■■■□ 3.16
PCMT1-201ENST00000367378 UBAP1LF5GYI3 381 aa34.78■■■■□ 3.16
PCMT1-201ENST00000367378 RTEL1-TNFRSF6BF6WH68 1400 aa34.78■■■■□ 3.16
PCMT1-201ENST00000367378 DNMT1P26358 1616 aaKnown RBP34.77■■■■□ 3.16
PCMT1-201ENST00000367378 A2ML1A8K2U0 1454 aa34.77■■■■□ 3.16
PCMT1-201ENST00000367378 DHX29Q7Z478 1369 aaKnown RBP34.76■■■■□ 3.16
PCMT1-201ENST00000367378 CEP162Q5TB80 1403 aa34.75■■■■□ 3.15
PCMT1-201ENST00000367378 FBXO31Q5XUX0 539 aaPredicted RBP34.68■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms