RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 DRC7Q8IY82 874 aa19.96■□□□□ 0.79
NUCKS1-201ENST00000367142 CCDC9Q9Y3X0 531 aaKnown RBP19.96■□□□□ 0.79
NUCKS1-201ENST00000367142 KIAA1211Q6ZU35 1233 aa19.96■□□□□ 0.79
NUCKS1-201ENST00000367142 EIF4G1Q04637 1599 aaKnown RBP19.95■□□□□ 0.78
NUCKS1-201ENST00000367142 CALD1Q05682 793 aaKnown RBP19.94■□□□□ 0.78
NUCKS1-201ENST00000367142 CEP164Q9UPV0 1460 aa19.94■□□□□ 0.78
NUCKS1-201ENST00000367142 CHMP4AQ9BY43 222 aa19.93■□□□□ 0.78
NUCKS1-201ENST00000367142 IPO8O15397 1037 aaKnown RBP19.93■□□□□ 0.78
NUCKS1-201ENST00000367142 GGT6Q6P531 493 aa19.92■□□□□ 0.78
NUCKS1-201ENST00000367142 STK26Q9P289 416 aa19.92■□□□□ 0.78
NUCKS1-201ENST00000367142 G3V3G9 751 aa19.9■□□□□ 0.78
NUCKS1-201ENST00000367142 DCAF8Q5TAQ9 597 aa19.9■□□□□ 0.78
NUCKS1-201ENST00000367142 FHAD1B1AJZ9 1412 aa19.88■□□□□ 0.77
NUCKS1-201ENST00000367142 HTATSF1O43719 755 aaKnown RBP19.88■□□□□ 0.77
NUCKS1-201ENST00000367142 GORABQ5T7V8 394 aa19.88■□□□□ 0.77
NUCKS1-201ENST00000367142 PRM3Q9NNZ6 103 aa19.87■□□□□ 0.77
NUCKS1-201ENST00000367142 SIN3AQ96ST3 1273 aa19.86■□□□□ 0.77
NUCKS1-201ENST00000367142 MSNP26038 577 aaKnown RBP19.86■□□□□ 0.77
NUCKS1-201ENST00000367142 TAF7LQ5H9L4 462 aa19.85■□□□□ 0.77
NUCKS1-201ENST00000367142 NOP58Q9Y2X3 529 aaKnown RBP19.85■□□□□ 0.77
NUCKS1-201ENST00000367142 APBB1O00213 710 aa19.85■□□□□ 0.77
NUCKS1-201ENST00000367142 NOC3LQ8WTT2 800 aaKnown RBP19.85■□□□□ 0.77
NUCKS1-201ENST00000367142 SPAG9O60271 1321 aaKnown RBP19.83■□□□□ 0.77
NUCKS1-201ENST00000367142 TNIKQ9UKE5 1360 aa19.83■□□□□ 0.77
NUCKS1-201ENST00000367142 GPATCH3Q96I76 525 aa19.83■□□□□ 0.76
NUCKS1-201ENST00000367142 HDAC5Q9UQL6 1122 aa19.83■□□□□ 0.76
NUCKS1-201ENST00000367142 CHMP3Q9Y3E7 222 aa19.82■□□□□ 0.76
NUCKS1-201ENST00000367142 KTN1Q86UP2 1357 aaKnown RBP19.82■□□□□ 0.76
NUCKS1-201ENST00000367142 STK31Q9BXU1 1019 aa19.81■□□□□ 0.76
NUCKS1-201ENST00000367142 CCDC34Q96HJ3 373 aa19.81■□□□□ 0.76
NUCKS1-201ENST00000367142 PTMSP20962 102 aa19.81■□□□□ 0.76
NUCKS1-201ENST00000367142 TPM4P67936 248 aa19.8■□□□□ 0.76
NUCKS1-201ENST00000367142 EID1Q9Y6B2 187 aa19.79■□□□□ 0.76
NUCKS1-201ENST00000367142 CCDC180Q9P1Z9 1646 aa19.78■□□□□ 0.76
NUCKS1-201ENST00000367142 CARMIL2Q6F5E8 1435 aa19.78■□□□□ 0.76
NUCKS1-201ENST00000367142 SPRYD3Q8NCJ5 442 aa19.78■□□□□ 0.76
NUCKS1-201ENST00000367142 U2AF1L5P0DN76 240 aaPredicted RBP19.77■□□□□ 0.76
NUCKS1-201ENST00000367142 U2AF1Q01081 240 aaKnown RBP eCLIP19.77■□□□□ 0.76
NUCKS1-201ENST00000367142 ITPRIPQ8IWB1 547 aa19.77■□□□□ 0.76
NUCKS1-201ENST00000367142 EIF3AQ14152 1382 aaKnown RBP19.77■□□□□ 0.75
NUCKS1-201ENST00000367142 HSP90B1P14625 803 aaKnown RBP19.75■□□□□ 0.75
NUCKS1-201ENST00000367142 RWDD1Q9H446 243 aaPredicted RBP19.75■□□□□ 0.75
NUCKS1-201ENST00000367142 RASSF8Q8NHQ8 419 aa19.74■□□□□ 0.75
NUCKS1-201ENST00000367142 GBP4Q96PP9 640 aa19.73■□□□□ 0.75
NUCKS1-201ENST00000367142 B4GALNT3Q6L9W6 998 aa19.72■□□□□ 0.75
NUCKS1-201ENST00000367142 CARMIL1Q5VZK9 1371 aa19.72■□□□□ 0.75
NUCKS1-201ENST00000367142 PKD2Q13563 968 aa19.71■□□□□ 0.75
NUCKS1-201ENST00000367142 GTF2E1P29083 439 aaPredicted RBP19.71■□□□□ 0.75
NUCKS1-201ENST00000367142 SYAP1Q96A49 352 aaPredicted RBP19.71■□□□□ 0.75
NUCKS1-201ENST00000367142 HMMRO75330 724 aa19.71■□□□□ 0.75
NUCKS1-201ENST00000367142 ROCK2O75116 1388 aaKnown RBP19.71■□□□□ 0.75
NUCKS1-201ENST00000367142 TIMELESSQ9UNS1 1208 aa19.7■□□□□ 0.74
NUCKS1-201ENST00000367142 EFCAB2Q5VUJ9 269 aa19.7■□□□□ 0.74
NUCKS1-201ENST00000367142 TERF2IPQ9NYB0 399 aa19.7■□□□□ 0.74
NUCKS1-201ENST00000367142 FRAT2O75474 233 aaPredicted RBP19.7■□□□□ 0.74
NUCKS1-201ENST00000367142 NGDNQ8NEJ9 315 aaKnown RBP19.69■□□□□ 0.74
NUCKS1-201ENST00000367142 CUX2O14529 1486 aa19.68■□□□□ 0.74
NUCKS1-201ENST00000367142 ARHGAP35Q9NRY4 1499 aa19.68■□□□□ 0.74
NUCKS1-201ENST00000367142 VPS53Q5VIR6 699 aa19.67■□□□□ 0.74
NUCKS1-201ENST00000367142 NACADO15069 1562 aa19.67■□□□□ 0.74
NUCKS1-201ENST00000367142 MARCH6O60337 910 aa19.67■□□□□ 0.74
NUCKS1-201ENST00000367142 CEP89Q96ST8 783 aa19.66■□□□□ 0.74
NUCKS1-201ENST00000367142 A0A0U1RQG5 324 aaPredicted RBP19.66■□□□□ 0.74
NUCKS1-201ENST00000367142 TRIM6-TRIM34B2RNG4 842 aa19.66■□□□□ 0.74
NUCKS1-201ENST00000367142 LMOD3Q0VAK6 560 aa19.66■□□□□ 0.74
NUCKS1-201ENST00000367142 CSPP1Q1MSJ5 1256 aa19.66■□□□□ 0.74
NUCKS1-201ENST00000367142 RTN4Q9NQC3 1192 aaKnown RBP19.66■□□□□ 0.74
NUCKS1-201ENST00000367142 HSPA5P11021 654 aaKnown RBP19.65■□□□□ 0.74
NUCKS1-201ENST00000367142 AMPHP49418 695 aa19.65■□□□□ 0.74
NUCKS1-201ENST00000367142 TOMM22Q9NS69 142 aa19.64■□□□□ 0.74
NUCKS1-201ENST00000367142 RALBP1Q15311 655 aa19.64■□□□□ 0.73
NUCKS1-201ENST00000367142 PMFBP1Q8TBY8 1022 aa19.64■□□□□ 0.73
NUCKS1-201ENST00000367142 PDE4CQ08493 712 aa19.63■□□□□ 0.73
NUCKS1-201ENST00000367142 CCER2I3L3R5 266 aa19.62■□□□□ 0.73
NUCKS1-201ENST00000367142 ANKRD30AQ9BXX3 1397 aa19.61■□□□□ 0.73
NUCKS1-201ENST00000367142 SMC4Q9NTJ3 1288 aa19.61■□□□□ 0.73
NUCKS1-201ENST00000367142 SETD5Q9C0A6 1442 aa19.6■□□□□ 0.73
NUCKS1-201ENST00000367142 SLC4A10Q6U841 1118 aa19.6■□□□□ 0.73
NUCKS1-201ENST00000367142 NUP155O75694 1391 aa19.59■□□□□ 0.73
NUCKS1-201ENST00000367142 KIF3AQ9Y496 699 aa19.58■□□□□ 0.73
NUCKS1-201ENST00000367142 KIF3BO15066 747 aa19.58■□□□□ 0.72
NUCKS1-201ENST00000367142 CREBRFQ8IUR6 639 aa19.57■□□□□ 0.72
NUCKS1-201ENST00000367142 GOLGA6L1Q8N7Z2 621 aa19.57■□□□□ 0.72
NUCKS1-201ENST00000367142 LTV1Q96GA3 475 aaPredicted RBP19.57■□□□□ 0.72
NUCKS1-201ENST00000367142 RCAN3Q9UKA8 241 aa19.57■□□□□ 0.72
NUCKS1-201ENST00000367142 USP35Q9P2H5 1018 aa19.56■□□□□ 0.72
NUCKS1-201ENST00000367142 WASHC2CQ9Y4E1 1318 aa19.55■□□□□ 0.72
NUCKS1-201ENST00000367142 MSH5O43196 834 aa19.55■□□□□ 0.72
NUCKS1-201ENST00000367142 TPM3P06753 285 aa19.55■□□□□ 0.72
NUCKS1-201ENST00000367142 MFAP1P55081 439 aaKnown RBP19.54■□□□□ 0.72
NUCKS1-201ENST00000367142 KRI1Q8N9T8 703 aaKnown RBP19.54■□□□□ 0.72
NUCKS1-201ENST00000367142 CTDP1Q9Y5B0 961 aaPredicted RBP19.53■□□□□ 0.72
NUCKS1-201ENST00000367142 EVA1CP58658 441 aa19.53■□□□□ 0.72
NUCKS1-201ENST00000367142 TRIM34Q9BYJ4 488 aa19.53■□□□□ 0.72
NUCKS1-201ENST00000367142 TCERG1O14776 1098 aaKnown RBP19.53■□□□□ 0.72
NUCKS1-201ENST00000367142 KIF16BQ96L93 1317 aa19.53■□□□□ 0.72
NUCKS1-201ENST00000367142 NOL10Q9BSC4 688 aaKnown RBP19.52■□□□□ 0.72
NUCKS1-201ENST00000367142 AMOTL1Q8IY63 956 aa19.52■□□□□ 0.71
NUCKS1-201ENST00000367142 PDS5BQ9NTI5 1447 aa19.52■□□□□ 0.71
NUCKS1-201ENST00000367142 TCEAL9Q9UHQ7 104 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms