RNA–Protein interactions for RNA: ENST00000367122.6

SYNJ2-204, Transcript of synaptojanin 2, human

TSL 1 (best) BASIC

Gene SYNJ2, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNJ2-204	ENST00000367122	POLR3GL	Q9BT43	218 aa		13.74	□□□□□ -0.21
SYNJ2-204	ENST00000367122	MSH5	O43196	834 aa		13.72	□□□□□ -0.21
SYNJ2-204	ENST00000367122	JPH4	Q96JJ6	628 aa		13.72	□□□□□ -0.21
SYNJ2-204	ENST00000367122	DEK	P35659	375 aa	Known RBP	13.71	□□□□□ -0.22
SYNJ2-204	ENST00000367122	ARAP1	Q96P48	1450 aa		13.7	□□□□□ -0.22
SYNJ2-204	ENST00000367122	BCCIP	Q9P287	314 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
SYNJ2-204	ENST00000367122	UGGT2	Q9NYU1	1516 aa		13.69	□□□□□ -0.22
SYNJ2-204	ENST00000367122	RRBP1	Q9P2E9	1410 aa	Known RBP	13.69	□□□□□ -0.22
SYNJ2-204	ENST00000367122	EFCAB5	A4FU69	1503 aa		13.69	□□□□□ -0.22
SYNJ2-204	ENST00000367122	OSCAR	Q8IYS5	282 aa		13.67	□□□□□ -0.22
SYNJ2-204	ENST00000367122	FANCI	Q9NVI1	1328 aa		13.67	□□□□□ -0.22
SYNJ2-204	ENST00000367122	FHOD3	Q2V2M9	1422 aa		13.67	□□□□□ -0.22
SYNJ2-204	ENST00000367122	SAMD9	Q5K651	1589 aa		13.67	□□□□□ -0.22
SYNJ2-204	ENST00000367122	ZMYND15	Q9H091	742 aa		13.65	□□□□□ -0.22
SYNJ2-204	ENST00000367122	DISP1	Q96F81	1524 aa		13.64	□□□□□ -0.23
SYNJ2-204	ENST00000367122	CLASP1	Q7Z460	1538 aa		13.64	□□□□□ -0.23
SYNJ2-204	ENST00000367122	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.62	□□□□□ -0.23
SYNJ2-204	ENST00000367122	ITGAE	P38570	1179 aa		13.62	□□□□□ -0.23
SYNJ2-204	ENST00000367122	CARMIL2	Q6F5E8	1435 aa		13.62	□□□□□ -0.23
SYNJ2-204	ENST00000367122	PRG4	Q92954	1404 aa	Predicted RBP	13.62	□□□□□ -0.23
SYNJ2-204	ENST00000367122	MAPKBP1	O60336	1514 aa		13.61	□□□□□ -0.23
SYNJ2-204	ENST00000367122	CCER2	I3L3R5	266 aa		13.61	□□□□□ -0.23
SYNJ2-204	ENST00000367122	KIAA0556	O60303	1618 aa		13.61	□□□□□ -0.23
SYNJ2-204	ENST00000367122	GLIPR1L2	Q4G1C9	344 aa		13.61	□□□□□ -0.23
SYNJ2-204	ENST00000367122	MYT1L	Q9UL68	1186 aa		13.61	□□□□□ -0.23
SYNJ2-204	ENST00000367122	KANK4	Q5T7N3	995 aa	Predicted RBP	13.6	□□□□□ -0.23
SYNJ2-204	ENST00000367122	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.6	□□□□□ -0.23
SYNJ2-204	ENST00000367122	PPP1R15A	O75807	674 aa	Predicted RBP	13.6	□□□□□ -0.23
SYNJ2-204	ENST00000367122	SHROOM2	Q13796	1616 aa		13.6	□□□□□ -0.23
SYNJ2-204	ENST00000367122	DDX10	Q13206	875 aa	Known RBP	13.59	□□□□□ -0.23
SYNJ2-204	ENST00000367122	FMN1	Q68DA7	1419 aa		13.59	□□□□□ -0.23
SYNJ2-204	ENST00000367122	CCNB3	Q8WWL7	1395 aa		13.57	□□□□□ -0.24
SYNJ2-204	ENST00000367122	KDM2A	Q9Y2K7	1162 aa		13.56	□□□□□ -0.24
SYNJ2-204	ENST00000367122	CCDC9	Q9Y3X0	531 aa	Known RBP	13.55	□□□□□ -0.24
SYNJ2-204	ENST00000367122	ERCC6L2	Q5T890	1561 aa		13.55	□□□□□ -0.24
SYNJ2-204	ENST00000367122	TRIM52	Q96A61	297 aa		13.54	□□□□□ -0.24
SYNJ2-204	ENST00000367122	CASKIN1	Q8WXD9	1431 aa		13.53	□□□□□ -0.24
SYNJ2-204	ENST00000367122	RAB3GAP2	Q9H2M9	1393 aa		13.53	□□□□□ -0.24
SYNJ2-204	ENST00000367122	HMGB1	P09429	215 aa	Known RBP	13.53	□□□□□ -0.24
SYNJ2-204	ENST00000367122	PCF11	O94913	1555 aa	Known RBP	13.53	□□□□□ -0.24
SYNJ2-204	ENST00000367122	PTPRG	P23470	1445 aa		13.52	□□□□□ -0.25
SYNJ2-204	ENST00000367122	FYCO1	Q9BQS8	1478 aa		13.51	□□□□□ -0.25
SYNJ2-204	ENST00000367122	ANP32C	O43423	234 aa		13.5	□□□□□ -0.25
SYNJ2-204	ENST00000367122	BRPF3	Q9ULD4	1205 aa		13.5	□□□□□ -0.25
SYNJ2-204	ENST00000367122	VSIG10	Q8N0Z9	540 aa		13.48	□□□□□ -0.25
SYNJ2-204	ENST00000367122	PLB1	Q6P1J6	1458 aa		13.48	□□□□□ -0.25
SYNJ2-204	ENST00000367122	ARID3C	A6NKF2	412 aa		13.47	□□□□□ -0.25
SYNJ2-204	ENST00000367122	SETD5	Q9C0A6	1442 aa		13.46	□□□□□ -0.25
SYNJ2-204	ENST00000367122	RAPGEF6	Q8TEU7	1601 aa		13.46	□□□□□ -0.26
SYNJ2-204	ENST00000367122	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.45	□□□□□ -0.26
SYNJ2-204	ENST00000367122	HECW1	Q76N89	1606 aa		13.44	□□□□□ -0.26
SYNJ2-204	ENST00000367122	MAP3K1	Q13233	1512 aa		13.44	□□□□□ -0.26
SYNJ2-204	ENST00000367122	ABCA8	O94911	1581 aa		13.44	□□□□□ -0.26
SYNJ2-204	ENST00000367122	TIAM1	Q13009	1591 aa		13.44	□□□□□ -0.26
SYNJ2-204	ENST00000367122	NUP153	P49790	1475 aa	Known RBP	13.43	□□□□□ -0.26
SYNJ2-204	ENST00000367122	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.43	□□□□□ -0.26
SYNJ2-204	ENST00000367122	LRRIQ1	Q96JM4	1722 aa		13.43	□□□□□ -0.26
SYNJ2-204	ENST00000367122	UACA	Q9BZF9	1416 aa		13.43	□□□□□ -0.26
SYNJ2-204	ENST00000367122	PUS7	Q96PZ0	661 aa	Known RBP	13.42	□□□□□ -0.26
SYNJ2-204	ENST00000367122	SIN3A	Q96ST3	1273 aa		13.42	□□□□□ -0.26
SYNJ2-204	ENST00000367122	EPRS	P07814	1512 aa	Known RBP	13.42	□□□□□ -0.26
SYNJ2-204	ENST00000367122	CCDC18	Q5T9S5	1454 aa		13.41	□□□□□ -0.26
SYNJ2-204	ENST00000367122	CDK13	Q14004	1512 aa	Known RBP	13.41	□□□□□ -0.26
SYNJ2-204	ENST00000367122	ARHGEF11	O15085	1522 aa		13.4	□□□□□ -0.26
SYNJ2-204	ENST00000367122	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	13.4	□□□□□ -0.26
SYNJ2-204	ENST00000367122	CFAP43	Q8NDM7	1665 aa		13.4	□□□□□ -0.26
SYNJ2-204	ENST00000367122	LRRC9	Q6ZRR7	1453 aa		13.39	□□□□□ -0.27
SYNJ2-204	ENST00000367122	ZFP91	Q96JP5	570 aa	Predicted RBP	13.39	□□□□□ -0.27
SYNJ2-204	ENST00000367122	PPP4R2	Q9NY27	417 aa		13.38	□□□□□ -0.27
SYNJ2-204	ENST00000367122	ATP10B	O94823	1461 aa		13.37	□□□□□ -0.27
SYNJ2-204	ENST00000367122	MTUS2	Q5JR59	1369 aa		13.37	□□□□□ -0.27
SYNJ2-204	ENST00000367122	ABCC2	Q92887	1545 aa		13.37	□□□□□ -0.27
SYNJ2-204	ENST00000367122	TICAM2	Q86XR7	235 aa		13.37	□□□□□ -0.27
SYNJ2-204	ENST00000367122	ZNF592	Q92610	1267 aa		13.37	□□□□□ -0.27
SYNJ2-204	ENST00000367122	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.37	□□□□□ -0.27
SYNJ2-204	ENST00000367122	PRDM10	Q9NQV6	1147 aa		13.37	□□□□□ -0.27
SYNJ2-204	ENST00000367122	UHRF1BP1L	A0JNW5	1464 aa		13.35	□□□□□ -0.27
SYNJ2-204	ENST00000367122	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
SYNJ2-204	ENST00000367122	CNPY4	Q8N129	248 aa		13.35	□□□□□ -0.27
SYNJ2-204	ENST00000367122	RIMBP3C	A6NJZ7	1639 aa		13.35	□□□□□ -0.27
SYNJ2-204	ENST00000367122	RIMBP3B	A6NNM3	1639 aa		13.35	□□□□□ -0.27
SYNJ2-204	ENST00000367122	RIMBP3	Q9UFD9	1639 aa		13.35	□□□□□ -0.27
SYNJ2-204	ENST00000367122	CYB5RL	Q6IPT4	315 aa		13.34	□□□□□ -0.27
SYNJ2-204	ENST00000367122	MAGI3	Q5TCQ9	1506 aa		13.34	□□□□□ -0.27
SYNJ2-204	ENST00000367122	TMED8	Q6PL24	325 aa	Predicted RBP	13.34	□□□□□ -0.27
SYNJ2-204	ENST00000367122	NCL	P19338	710 aa	Known RBP	13.33	□□□□□ -0.28
SYNJ2-204	ENST00000367122	PHF23	Q9BUL5	403 aa	Predicted RBP	13.33	□□□□□ -0.28
SYNJ2-204	ENST00000367122	NOP58	Q9Y2X3	529 aa	Known RBP	13.33	□□□□□ -0.28
SYNJ2-204	ENST00000367122	PLEKHD1	A6NEE1	506 aa		13.32	□□□□□ -0.28
SYNJ2-204	ENST00000367122	ADCY10	Q96PN6	1610 aa		13.31	□□□□□ -0.28
SYNJ2-204	ENST00000367122	CHMP4B	Q9H444	224 aa	Known RBP	13.31	□□□□□ -0.28
SYNJ2-204	ENST00000367122	EHBP1L1	Q8N3D4	1523 aa		13.31	□□□□□ -0.28
SYNJ2-204	ENST00000367122	KDM5B	Q9UGL1	1544 aa		13.3	□□□□□ -0.28
SYNJ2-204	ENST00000367122	PHLDB1	Q86UU1	1377 aa		13.29	□□□□□ -0.28
SYNJ2-204	ENST00000367122	TRO	Q12816	1431 aa	Predicted RBP	13.29	□□□□□ -0.28
SYNJ2-204	ENST00000367122	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.28	□□□□□ -0.28
SYNJ2-204	ENST00000367122	NPM1	P06748	294 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
SYNJ2-204	ENST00000367122	SECISBP2L	Q93073	1101 aa	Known RBP	13.27	□□□□□ -0.28
SYNJ2-204	ENST00000367122	NCOA2	Q15596	1464 aa		13.27	□□□□□ -0.29
SYNJ2-204	ENST00000367122	TEX2	Q8IWB9	1127 aa		13.27	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms