RNA–Protein interactions for RNA: ENST00000366985.5

ATF3-205, Transcript of activating transcription factor 3, humanhuman

TSL 5

Gene ATF3, Length 516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-205ENST00000366985 MAGI2Q86UL8 1455 aa13.08□□□□□ -0.32
ATF3-205ENST00000366985 UHRF1BP1Q6BDS2 1440 aa13.07□□□□□ -0.32
ATF3-205ENST00000366985 RAPGEF6Q8TEU7 1601 aa13.06□□□□□ -0.32
ATF3-205ENST00000366985 FHOD3Q2V2M9 1422 aa13.06□□□□□ -0.32
ATF3-205ENST00000366985 IQSEC2Q5JU85 1478 aa13.05□□□□□ -0.32
ATF3-205ENST00000366985 ZMYM4Q5VZL5 1548 aa13.05□□□□□ -0.32
ATF3-205ENST00000366985 PLEKHD1A6NEE1 506 aa13.05□□□□□ -0.32
ATF3-205ENST00000366985 ESF1Q9H501 851 aaKnown RBP13.05□□□□□ -0.32
ATF3-205ENST00000366985 P3H3Q8IVL6 736 aa13.04□□□□□ -0.32
ATF3-205ENST00000366985 PTPRTO14522 1441 aa13.02□□□□□ -0.33
ATF3-205ENST00000366985 STRCQ7RTU9 1775 aa13.02□□□□□ -0.33
ATF3-205ENST00000366985 SETD1BQ9UPS6 1966 aaKnown RBP13□□□□□ -0.33
ATF3-205ENST00000366985 MYT1LQ9UL68 1186 aa13□□□□□ -0.33
ATF3-205ENST00000366985 C9orf84Q5VXU9 1444 aa12.99□□□□□ -0.33
ATF3-205ENST00000366985 HECW1Q76N89 1606 aa12.99□□□□□ -0.33
ATF3-205ENST00000366985 ARHGEF12Q9NZN5 1544 aa12.98□□□□□ -0.33
ATF3-205ENST00000366985 ATP10AO60312 1499 aa12.98□□□□□ -0.33
ATF3-205ENST00000366985 UBAP1LF5GYI3 381 aa12.98□□□□□ -0.33
ATF3-205ENST00000366985 SRCAPQ6ZRS2 3230 aa12.97□□□□□ -0.33
ATF3-205ENST00000366985 CEBPAP49715 358 aaPredicted RBP12.95□□□□□ -0.34
ATF3-205ENST00000366985 SCAPERQ9BY12 1400 aa12.95□□□□□ -0.34
ATF3-205ENST00000366985 SIGLEC1Q9BZZ2 1709 aa12.94□□□□□ -0.34
ATF3-205ENST00000366985 SAMD9Q5K651 1589 aa12.94□□□□□ -0.34
ATF3-205ENST00000366985 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.93□□□□□ -0.34
ATF3-205ENST00000366985 NUP153P49790 1475 aaKnown RBP12.92□□□□□ -0.34
ATF3-205ENST00000366985 HSPA1LP34931 641 aa12.92□□□□□ -0.34
ATF3-205ENST00000366985 PRXQ9BXM0 1461 aa12.91□□□□□ -0.34
ATF3-205ENST00000366985 LTBP4Q8N2S1 1624 aa12.91□□□□□ -0.34
ATF3-205ENST00000366985 EFCAB2Q5VUJ9 269 aa12.9□□□□□ -0.34
ATF3-205ENST00000366985 ZNF518AQ6AHZ1 1483 aa12.9□□□□□ -0.34
ATF3-205ENST00000366985 SCAF1Q9H7N4 1312 aaKnown RBP12.89□□□□□ -0.35
ATF3-205ENST00000366985 MYO5CQ9NQX4 1742 aa12.89□□□□□ -0.35
ATF3-205ENST00000366985 C3P01024 1663 aa12.89□□□□□ -0.35
ATF3-205ENST00000366985 PLCH2O75038 1416 aa12.88□□□□□ -0.35
ATF3-205ENST00000366985 TRAPPC8Q9Y2L5 1435 aa12.88□□□□□ -0.35
ATF3-205ENST00000366985 SUPT6HQ7KZ85 1726 aaKnown RBP12.86□□□□□ -0.35
ATF3-205ENST00000366985 RANGAP1P46060 587 aaPredicted RBP12.86□□□□□ -0.35
ATF3-205ENST00000366985 IFFO2Q5TF58 517 aa12.86□□□□□ -0.35
ATF3-205ENST00000366985 CDK11AQ9UQ88 783 aaPredicted RBP12.86□□□□□ -0.35
ATF3-205ENST00000366985 NCOA1Q15788 1441 aa12.86□□□□□ -0.35
ATF3-205ENST00000366985 CNTLNQ9NXG0 1405 aa12.86□□□□□ -0.35
ATF3-205ENST00000366985 CAMSAP1Q5T5Y3 1602 aa12.84□□□□□ -0.35
ATF3-205ENST00000366985 REREQ9P2R6 1566 aa12.82□□□□□ -0.36
ATF3-205ENST00000366985 TOM1O60784 492 aa12.82□□□□□ -0.36
ATF3-205ENST00000366985 PKD2Q13563 968 aa12.82□□□□□ -0.36
ATF3-205ENST00000366985 ATP1B4Q9UN42 357 aaPredicted RBP12.81□□□□□ -0.36
ATF3-205ENST00000366985 AGLP35573 1532 aa12.81□□□□□ -0.36
ATF3-205ENST00000366985 ARHGAP5Q13017 1502 aa12.81□□□□□ -0.36
ATF3-205ENST00000366985 KIF14Q15058 1648 aa12.8□□□□□ -0.36
ATF3-205ENST00000366985 NPATQ14207 1427 aa12.79□□□□□ -0.36
ATF3-205ENST00000366985 KDM5CP41229 1560 aa12.79□□□□□ -0.36
ATF3-205ENST00000366985 DIP2CQ9Y2E4 1556 aa12.79□□□□□ -0.36
ATF3-205ENST00000366985 PIP4K2BP78356 416 aa12.79□□□□□ -0.36
ATF3-205ENST00000366985 RGS17Q9UGC6 210 aaPredicted RBP12.79□□□□□ -0.36
ATF3-205ENST00000366985 ZNF335Q9H4Z2 1342 aaPredicted RBP12.79□□□□□ -0.36
ATF3-205ENST00000366985 CLIP1P30622 1438 aa12.79□□□□□ -0.36
ATF3-205ENST00000366985 MROH2AA6NES4 1674 aa12.78□□□□□ -0.36
ATF3-205ENST00000366985 AFAP1Q8N556 730 aa12.76□□□□□ -0.37
ATF3-205ENST00000366985 CSRNP3Q8WYN3 585 aa12.76□□□□□ -0.37
ATF3-205ENST00000366985 NCKAP5LQ9HCH0 1330 aa12.76□□□□□ -0.37
ATF3-205ENST00000366985 CDK13Q14004 1512 aaKnown RBP12.76□□□□□ -0.37
ATF3-205ENST00000366985 PLA2R1Q13018 1463 aa12.75□□□□□ -0.37
ATF3-205ENST00000366985 ABCA6Q8N139 1617 aa12.75□□□□□ -0.37
ATF3-205ENST00000366985 MLH3Q9UHC1 1453 aa12.74□□□□□ -0.37
ATF3-205ENST00000366985 ZNF142P52746 1687 aaPredicted RBP12.73□□□□□ -0.37
ATF3-205ENST00000366985 CPS1P31327 1500 aa12.72□□□□□ -0.37
ATF3-205ENST00000366985 PTPRKQ15262 1439 aa12.72□□□□□ -0.37
ATF3-205ENST00000366985 FMN1Q68DA7 1419 aa12.71□□□□□ -0.37
ATF3-205ENST00000366985 MYO3AQ8NEV4 1616 aa12.71□□□□□ -0.37
ATF3-205ENST00000366985 CEP170BQ9Y4F5 1589 aaPredicted RBP12.7□□□□□ -0.38
ATF3-205ENST00000366985 ZMYM3Q14202 1370 aa12.69□□□□□ -0.38
ATF3-205ENST00000366985 ITSN2Q9NZM3 1697 aa12.68□□□□□ -0.38
ATF3-205ENST00000366985 POTEAQ6S8J7 498 aa12.68□□□□□ -0.38
ATF3-205ENST00000366985 EEA1Q15075 1411 aa12.68□□□□□ -0.38
ATF3-205ENST00000366985 CLTCQ00610 1675 aaKnown RBP12.67□□□□□ -0.38
ATF3-205ENST00000366985 TCOF1Q13428 1488 aaKnown RBP12.67□□□□□ -0.38
ATF3-205ENST00000366985 TROQ12816 1431 aaPredicted RBP12.67□□□□□ -0.38
ATF3-205ENST00000366985 POLR1AO95602 1720 aaPredicted RBP12.67□□□□□ -0.38
ATF3-205ENST00000366985 CDC42BPBQ9Y5S2 1711 aa12.66□□□□□ -0.38
ATF3-205ENST00000366985 SETD1AO15047 1707 aaKnown RBP12.65□□□□□ -0.38
ATF3-205ENST00000366985 UPF1Q92900 1129 aaKnown RBP eCLIP12.65□□□□□ -0.38
ATF3-205ENST00000366985 ABCC1P33527 1531 aa12.65□□□□□ -0.38
ATF3-205ENST00000366985 KIDINS220Q9ULH0 1771 aa12.65□□□□□ -0.38
ATF3-205ENST00000366985 PREX2Q70Z35 1606 aa12.65□□□□□ -0.38
ATF3-205ENST00000366985 SHANK2Q9UPX8 1470 aa12.63□□□□□ -0.39
ATF3-205ENST00000366985 A2ML1A8K2U0 1454 aa12.62□□□□□ -0.39
ATF3-205ENST00000366985 SPAG9O60271 1321 aaKnown RBP12.62□□□□□ -0.39
ATF3-205ENST00000366985 GGT6Q6P531 493 aa12.61□□□□□ -0.39
ATF3-205ENST00000366985 ANKLE2Q86XL3 938 aa12.6□□□□□ -0.39
ATF3-205ENST00000366985 DNMT1P26358 1616 aaKnown RBP12.59□□□□□ -0.39
ATF3-205ENST00000366985 ZNF777Q9ULD5 760 aaPredicted RBP12.59□□□□□ -0.39
ATF3-205ENST00000366985 SAMD9LQ8IVG5 1584 aa12.58□□□□□ -0.4
ATF3-205ENST00000366985 UBTFP17480 764 aaKnown RBP12.57□□□□□ -0.4
ATF3-205ENST00000366985 THEMISQ8N1K5 641 aaPredicted RBP12.57□□□□□ -0.4
ATF3-205ENST00000366985 CCDC18Q5T9S5 1454 aa12.57□□□□□ -0.4
ATF3-205ENST00000366985 ATP7AQ04656 1500 aa12.57□□□□□ -0.4
ATF3-205ENST00000366985 RNF17Q9BXT8 1623 aaKnown RBP12.56□□□□□ -0.4
ATF3-205ENST00000366985 A2MP01023 1474 aa12.56□□□□□ -0.4
ATF3-205ENST00000366985 ADGBQ8N7X0 1667 aa12.55□□□□□ -0.4
ATF3-205ENST00000366985 PLEKHH2Q8IVE3 1493 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms