RNA–Protein interactions for RNA: ENST00000366690.4

RAB4A-201, Transcript of RAB4A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB4A, Length 2,966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4A-201ENST00000366690 GCC2Q8IWJ2 1684 aa25.75■■□□□ 1.71
RAB4A-201ENST00000366690 WDR62O43379 1518 aa25.75■■□□□ 1.71
RAB4A-201ENST00000366690 ZNF326Q5BKZ1 582 aaKnown RBP25.74■■□□□ 1.71
RAB4A-201ENST00000366690 POLR3GLQ9BT43 218 aa25.74■■□□□ 1.71
RAB4A-201ENST00000366690 SENP3-EIF4A1A0A087X0R7 540 aa25.71■■□□□ 1.71
RAB4A-201ENST00000366690 DAPK1P53355 1430 aa25.69■■□□□ 1.7
RAB4A-201ENST00000366690 MIA2Q96PC5 1412 aa25.68■■□□□ 1.7
RAB4A-201ENST00000366690 MRC2Q9UBG0 1479 aa25.67■■□□□ 1.7
RAB4A-201ENST00000366690 RBM19Q9Y4C8 960 aaKnown RBP25.66■■□□□ 1.7
RAB4A-201ENST00000366690 ABCC5O15440 1437 aa25.66■■□□□ 1.7
RAB4A-201ENST00000366690 PRG4Q92954 1404 aaPredicted RBP25.64■■□□□ 1.69
RAB4A-201ENST00000366690 MRS2Q9HD23 443 aa25.63■■□□□ 1.69
RAB4A-201ENST00000366690 NUP153P49790 1475 aaKnown RBP25.63■■□□□ 1.69
RAB4A-201ENST00000366690 ANKRD30BQ9BXX2 1392 aa25.62■■□□□ 1.69
RAB4A-201ENST00000366690 DISP1Q96F81 1524 aa25.62■■□□□ 1.69
RAB4A-201ENST00000366690 CFDP1Q9UEE9 299 aaPredicted RBP25.62■■□□□ 1.69
RAB4A-201ENST00000366690 CCDC7Q96M83 1385 aa25.61■■□□□ 1.69
RAB4A-201ENST00000366690 CNTLNQ9NXG0 1405 aa25.61■■□□□ 1.69
RAB4A-201ENST00000366690 PRKRIP1Q9H875 184 aaPredicted RBP25.6■■□□□ 1.69
RAB4A-201ENST00000366690 AKNAQ7Z591 1439 aa25.6■■□□□ 1.69
RAB4A-201ENST00000366690 KIAA0556O60303 1618 aa25.57■■□□□ 1.68
RAB4A-201ENST00000366690 KIF7Q2M1P5 1343 aa25.57■■□□□ 1.68
RAB4A-201ENST00000366690 CDK11AQ9UQ88 783 aaPredicted RBP25.57■■□□□ 1.68
RAB4A-201ENST00000366690 CHMP7Q8WUX9 453 aaPredicted RBP25.56■■□□□ 1.68
RAB4A-201ENST00000366690 ANP32EQ9BTT0 268 aa25.56■■□□□ 1.68
RAB4A-201ENST00000366690 PLB1Q6P1J6 1458 aa25.55■■□□□ 1.68
RAB4A-201ENST00000366690 RPRD2Q5VT52 1461 aaKnown RBP25.54■■□□□ 1.68
RAB4A-201ENST00000366690 KIAA0586Q9BVV6 1533 aa25.54■■□□□ 1.68
RAB4A-201ENST00000366690 NCOA1Q15788 1441 aa25.53■■□□□ 1.68
RAB4A-201ENST00000366690 TEX14Q8IWB6 1497 aa25.52■■□□□ 1.68
RAB4A-201ENST00000366690 DNMT1P26358 1616 aaKnown RBP25.52■■□□□ 1.68
RAB4A-201ENST00000366690 RAPGEF6Q8TEU7 1601 aa25.51■■□□□ 1.67
RAB4A-201ENST00000366690 IFT140Q96RY7 1462 aa25.5■■□□□ 1.67
RAB4A-201ENST00000366690 GRIN2AQ12879 1464 aa25.5■■□□□ 1.67
RAB4A-201ENST00000366690 PKD2Q13563 968 aa25.5■■□□□ 1.67
RAB4A-201ENST00000366690 ROCK1Q13464 1354 aa25.49■■□□□ 1.67
RAB4A-201ENST00000366690 CAMSAP2Q08AD1 1489 aa25.47■■□□□ 1.67
RAB4A-201ENST00000366690 EIF4G3O43432 1585 aaKnown RBP25.45■■□□□ 1.66
RAB4A-201ENST00000366690 KIF14Q15058 1648 aa25.45■■□□□ 1.66
RAB4A-201ENST00000366690 PZPP20742 1482 aa25.44■■□□□ 1.66
RAB4A-201ENST00000366690 KDM2AQ9Y2K7 1162 aa25.44■■□□□ 1.66
RAB4A-201ENST00000366690 B4GALNT3Q6L9W6 998 aa25.42■■□□□ 1.66
RAB4A-201ENST00000366690 TROQ12816 1431 aaPredicted RBP25.42■■□□□ 1.66
RAB4A-201ENST00000366690 ERCC6Q03468 1493 aa25.4■■□□□ 1.66
RAB4A-201ENST00000366690 GPATCH8Q9UKJ3 1502 aaKnown RBP25.4■■□□□ 1.66
RAB4A-201ENST00000366690 SPATA31E1Q6ZUB1 1445 aa25.39■■□□□ 1.66
RAB4A-201ENST00000366690 JPH4Q96JJ6 628 aa25.38■■□□□ 1.65
RAB4A-201ENST00000366690 USP47Q96K76 1375 aa25.37■■□□□ 1.65
RAB4A-201ENST00000366690 CEP170Q5SW79 1584 aa25.35■■□□□ 1.65
RAB4A-201ENST00000366690 MSH5O43196 834 aa25.35■■□□□ 1.65
RAB4A-201ENST00000366690 NUP155O75694 1391 aa25.33■■□□□ 1.64
RAB4A-201ENST00000366690 HNRNPMP52272 730 aaKnown RBP eCLIP25.32■■□□□ 1.64
RAB4A-201ENST00000366690 ZBED9Q6R2W3 1325 aa25.31■■□□□ 1.64
RAB4A-201ENST00000366690 KIAA1107Q9UPP5 1409 aa25.31■■□□□ 1.64
RAB4A-201ENST00000366690 PLEKHD1A6NEE1 506 aa25.31■■□□□ 1.64
RAB4A-201ENST00000366690 ANKRD50Q9ULJ7 1429 aa25.3■■□□□ 1.64
RAB4A-201ENST00000366690 ANKRD30AQ9BXX3 1397 aa25.3■■□□□ 1.64
RAB4A-201ENST00000366690 BCORL1Q5H9F3 1711 aa25.28■■□□□ 1.64
RAB4A-201ENST00000366690 CARD11Q9BXL7 1154 aa25.28■■□□□ 1.64
RAB4A-201ENST00000366690 PPP4R2Q9NY27 417 aa25.28■■□□□ 1.64
RAB4A-201ENST00000366690 DCAF11Q8TEB1 546 aa25.25■■□□□ 1.63
RAB4A-201ENST00000366690 DHX29Q7Z478 1369 aaKnown RBP25.25■■□□□ 1.63
RAB4A-201ENST00000366690 ITSN2Q9NZM3 1697 aa25.23■■□□□ 1.63
RAB4A-201ENST00000366690 SYNJ2O15056 1496 aa25.23■■□□□ 1.63
RAB4A-201ENST00000366690 CARMIL2Q6F5E8 1435 aa25.23■■□□□ 1.63
RAB4A-201ENST00000366690 TSPY4P0CV99 314 aa25.23■■□□□ 1.63
RAB4A-201ENST00000366690 TSPY10P0CW01 314 aa25.23■■□□□ 1.63
RAB4A-201ENST00000366690 ST20-MTHFSA0A0A6YYL1 179 aa25.22■■□□□ 1.63
RAB4A-201ENST00000366690 ADGBQ8N7X0 1667 aa25.22■■□□□ 1.63
RAB4A-201ENST00000366690 SALL2Q9Y467 1007 aaPredicted RBP25.21■■□□□ 1.63
RAB4A-201ENST00000366690 C9orf84Q5VXU9 1444 aa25.2■■□□□ 1.63
RAB4A-201ENST00000366690 MBD5Q9P267 1494 aa25.2■■□□□ 1.63
RAB4A-201ENST00000366690 RGL3Q3MIN7 710 aa25.2■■□□□ 1.62
RAB4A-201ENST00000366690 MAGI1Q96QZ7 1491 aaPredicted RBP25.2■■□□□ 1.62
RAB4A-201ENST00000366690 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.18■■□□□ 1.624e-8■□□□□ 10.6
RAB4A-201ENST00000366690 TMC1Q8TDI8 760 aa25.17■■□□□ 1.62
RAB4A-201ENST00000366690 ATP10BO94823 1461 aa25.16■■□□□ 1.62
RAB4A-201ENST00000366690 CROCC2H7BZ55 1655 aa25.16■■□□□ 1.62
RAB4A-201ENST00000366690 POLR1AO95602 1720 aaPredicted RBP25.15■■□□□ 1.62
RAB4A-201ENST00000366690 ADGRL2O95490 1459 aa25.15■■□□□ 1.62
RAB4A-201ENST00000366690 CDC42BPAQ5VT25 1732 aa25.15■■□□□ 1.62
RAB4A-201ENST00000366690 KIF15Q9NS87 1388 aa25.14■■□□□ 1.62
RAB4A-201ENST00000366690 KDM5CP41229 1560 aa25.12■■□□□ 1.61
RAB4A-201ENST00000366690 ERICH6Q7L0X2 663 aa25.1■■□□□ 1.61
RAB4A-201ENST00000366690 ADCY10Q96PN6 1610 aa25.1■■□□□ 1.61
RAB4A-201ENST00000366690 NUP160Q12769 1436 aa25.08■■□□□ 1.61
RAB4A-201ENST00000366690 PNISRQ8TF01 805 aaKnown RBP25.08■■□□□ 1.6
RAB4A-201ENST00000366690 NUDCQ9Y266 331 aa25.08■■□□□ 1.6
RAB4A-201ENST00000366690 ABCC10Q5T3U5 1492 aa25.07■■□□□ 1.6
RAB4A-201ENST00000366690 ROCK2O75116 1388 aaKnown RBP25.06■■□□□ 1.6
RAB4A-201ENST00000366690 ERICH6BQ5W0A0 696 aa25.06■■□□□ 1.6
RAB4A-201ENST00000366690 NBPF1Q3BBV0 1214 aa25.05■■□□□ 1.6
RAB4A-201ENST00000366690 FANCIQ9NVI1 1328 aa25.03■■□□□ 1.6
RAB4A-201ENST00000366690 RALGAPBQ86X10 1494 aa25.03■■□□□ 1.6
RAB4A-201ENST00000366690 ABCA8O94911 1581 aa25.02■■□□□ 1.6
RAB4A-201ENST00000366690 CCDC136Q96JN2 1154 aa25.02■■□□□ 1.6
RAB4A-201ENST00000366690 SMG6Q86US8 1419 aaKnown RBP25.02■■□□□ 1.6
RAB4A-201ENST00000366690 PTPRGP23470 1445 aa25■■□□□ 1.59
RAB4A-201ENST00000366690 UHRF1BP1Q6BDS2 1440 aa24.98■■□□□ 1.59
RAB4A-201ENST00000366690 CC2D1BQ5T0F9 858 aaKnown RBP24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms