RNA–Protein interactions for RNA: ENST00000366516.5

SMYD3-201, Transcript of SET and MYND domain containing 3, humanhuman

TSL 1 (best)

Gene SMYD3, Length 1,863 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-201ENST00000366516 P3H3Q8IVL6 736 aa12.37□□□□□ -0.43
SMYD3-201ENST00000366516 PRKRIP1Q9H875 184 aaPredicted RBP12.37□□□□□ -0.43
SMYD3-201ENST00000366516 CCDC7Q96M83 1385 aa12.37□□□□□ -0.43
SMYD3-201ENST00000366516 SMG6Q86US8 1419 aaKnown RBP12.35□□□□□ -0.43
SMYD3-201ENST00000366516 MIA2Q96PC5 1412 aa12.35□□□□□ -0.43
SMYD3-201ENST00000366516 PDS5BQ9NTI5 1447 aa12.35□□□□□ -0.43
SMYD3-201ENST00000366516 DEKP35659 375 aaKnown RBP12.35□□□□□ -0.43
SMYD3-201ENST00000366516 ANP32AP39687 249 aaKnown RBP12.35□□□□□ -0.43
SMYD3-201ENST00000366516 IRX6P78412 446 aaPredicted RBP12.35□□□□□ -0.43
SMYD3-201ENST00000366516 MRS2Q9HD23 443 aa12.35□□□□□ -0.43
SMYD3-201ENST00000366516 POLA1P09884 1462 aaPredicted RBP12.34□□□□□ -0.43
SMYD3-201ENST00000366516 TOPBP1Q92547 1522 aa12.33□□□□□ -0.44
SMYD3-201ENST00000366516 HOXD11P31277 338 aaPredicted RBP12.31□□□□□ -0.44
SMYD3-201ENST00000366516 RTL5Q5HYW3 569 aaPredicted RBP12.31□□□□□ -0.44
SMYD3-201ENST00000366516 LRRIQ1Q96JM4 1722 aa12.31□□□□□ -0.44
SMYD3-201ENST00000366516 RPRD2Q5VT52 1461 aaKnown RBP12.31□□□□□ -0.44
SMYD3-201ENST00000366516 SLC4A1APQ9BWU0 796 aaKnown RBP12.31□□□□□ -0.44
SMYD3-201ENST00000366516 ROCK1Q13464 1354 aa12.3□□□□□ -0.44
SMYD3-201ENST00000366516 ARID4BQ4LE39 1312 aaPredicted RBP12.3□□□□□ -0.44
SMYD3-201ENST00000366516 B4GALNT3Q6L9W6 998 aa12.29□□□□□ -0.44
SMYD3-201ENST00000366516 FAM9BQ8IZU0 186 aa12.29□□□□□ -0.44
SMYD3-201ENST00000366516 RNF123Q5XPI4 1314 aa12.28□□□□□ -0.44
SMYD3-201ENST00000366516 DENND4BO75064 1496 aaPredicted RBP12.28□□□□□ -0.44
SMYD3-201ENST00000366516 RAD54L2Q9Y4B4 1467 aa12.28□□□□□ -0.44
SMYD3-201ENST00000366516 IPO9Q96P70 1041 aaKnown RBP12.27□□□□□ -0.44
SMYD3-201ENST00000366516 NUDCQ9Y266 331 aa12.27□□□□□ -0.44
SMYD3-201ENST00000366516 TEX14Q8IWB6 1497 aa12.27□□□□□ -0.45
SMYD3-201ENST00000366516 MPHOSPH9Q99550 1183 aa12.27□□□□□ -0.45
SMYD3-201ENST00000366516 SPATA31E1Q6ZUB1 1445 aa12.27□□□□□ -0.45
SMYD3-201ENST00000366516 OSCARQ8IYS5 282 aa12.26□□□□□ -0.45
SMYD3-201ENST00000366516 CCDC136Q96JN2 1154 aa12.26□□□□□ -0.45
SMYD3-201ENST00000366516 ROCK2O75116 1388 aaKnown RBP12.26□□□□□ -0.45
SMYD3-201ENST00000366516 L3MBTL2Q969R5 705 aa12.25□□□□□ -0.45
SMYD3-201ENST00000366516 ZBTB47Q9UFB7 747 aaPredicted RBP12.25□□□□□ -0.45
SMYD3-201ENST00000366516 KTN1Q86UP2 1357 aaKnown RBP12.24□□□□□ -0.45
SMYD3-201ENST00000366516 ANKRD30BQ9BXX2 1392 aa12.24□□□□□ -0.45
SMYD3-201ENST00000366516 MRC2Q9UBG0 1479 aa12.24□□□□□ -0.45
SMYD3-201ENST00000366516 KIF7Q2M1P5 1343 aa12.23□□□□□ -0.45
SMYD3-201ENST00000366516 RRP7BPQ9NSQ0 103 aa12.23□□□□□ -0.45
SMYD3-201ENST00000366516 USP35Q9P2H5 1018 aa12.23□□□□□ -0.45
SMYD3-201ENST00000366516 WDR62O43379 1518 aa12.22□□□□□ -0.45
SMYD3-201ENST00000366516 GAPVD1Q14C86 1478 aa12.21□□□□□ -0.45
SMYD3-201ENST00000366516 EPRSP07814 1512 aaKnown RBP12.21□□□□□ -0.45
SMYD3-201ENST00000366516 MAGI3Q5TCQ9 1506 aa12.21□□□□□ -0.45
SMYD3-201ENST00000366516 DNMT1P26358 1616 aaKnown RBP12.21□□□□□ -0.46
SMYD3-201ENST00000366516 CCDC184Q52MB2 194 aa12.21□□□□□ -0.46
SMYD3-201ENST00000366516 KIF14Q15058 1648 aa12.2□□□□□ -0.46
SMYD3-201ENST00000366516 KDM6BO15054 1643 aa12.2□□□□□ -0.46
SMYD3-201ENST00000366516 NBR1Q14596 966 aa12.19□□□□□ -0.46
SMYD3-201ENST00000366516 DAPK1P53355 1430 aa12.19□□□□□ -0.46
SMYD3-201ENST00000366516 DHX29Q7Z478 1369 aaKnown RBP12.18□□□□□ -0.46
SMYD3-201ENST00000366516 MBD5Q9P267 1494 aa12.17□□□□□ -0.46
SMYD3-201ENST00000366516 TCERG1O14776 1098 aaKnown RBP12.17□□□□□ -0.46
SMYD3-201ENST00000366516 CHIC2Q9UKJ5 165 aa12.17□□□□□ -0.46
SMYD3-201ENST00000366516 IQGAP2Q13576 1575 aa12.17□□□□□ -0.46
SMYD3-201ENST00000366516 C11orf95C9JLR9 678 aaPredicted RBP12.17□□□□□ -0.46
SMYD3-201ENST00000366516 PAK3O75914 559 aaPredicted RBP12.15□□□□□ -0.46
SMYD3-201ENST00000366516 MS4A1P11836 297 aa12.14□□□□□ -0.47
SMYD3-201ENST00000366516 KIF15Q9NS87 1388 aa12.14□□□□□ -0.47
SMYD3-201ENST00000366516 PPM1GO15355 546 aaPredicted RBP12.14□□□□□ -0.47
SMYD3-201ENST00000366516 BRD4O60885 1362 aaPredicted RBP12.14□□□□□ -0.47
SMYD3-201ENST00000366516 NBPF8Q3BBV2 869 aa12.14□□□□□ -0.47
SMYD3-201ENST00000366516 ADGBQ8N7X0 1667 aa12.14□□□□□ -0.47
SMYD3-201ENST00000366516 USP47Q96K76 1375 aa12.14□□□□□ -0.47
SMYD3-201ENST00000366516 KDM5CP41229 1560 aa12.13□□□□□ -0.47
SMYD3-201ENST00000366516 URB2Q14146 1524 aaKnown RBP12.13□□□□□ -0.47
SMYD3-201ENST00000366516 PDE3BQ13370 1112 aa12.12□□□□□ -0.47
SMYD3-201ENST00000366516 TMC1Q8TDI8 760 aa12.12□□□□□ -0.47
SMYD3-201ENST00000366516 ARHGEF12Q9NZN5 1544 aa12.12□□□□□ -0.47
SMYD3-201ENST00000366516 RALGAPBQ86X10 1494 aa12.11□□□□□ -0.47
SMYD3-201ENST00000366516 ABCC5O15440 1437 aa12.11□□□□□ -0.47
SMYD3-201ENST00000366516 KIAA1107Q9UPP5 1409 aa12.11□□□□□ -0.47
SMYD3-201ENST00000366516 LRPPRCP42704 1394 aaKnown RBP12.11□□□□□ -0.47
SMYD3-201ENST00000366516 ITSN2Q9NZM3 1697 aa12.11□□□□□ -0.47
SMYD3-201ENST00000366516 RALBP1Q15311 655 aa12.11□□□□□ -0.47
SMYD3-201ENST00000366516 DDRGK1Q96HY6 314 aa12.11□□□□□ -0.47
SMYD3-201ENST00000366516 ZMYM4Q5VZL5 1548 aa12.11□□□□□ -0.47
SMYD3-201ENST00000366516 UHRF1BP1Q6BDS2 1440 aa12.11□□□□□ -0.47
SMYD3-201ENST00000366516 INSRP06213 1382 aa12.11□□□□□ -0.47
SMYD3-201ENST00000366516 PNISRQ8TF01 805 aaKnown RBP12.1□□□□□ -0.47
SMYD3-201ENST00000366516 MYBBP1AQ9BQG0 1328 aaKnown RBP12.09□□□□□ -0.47
SMYD3-201ENST00000366516 ADGRL2O95490 1459 aa12.09□□□□□ -0.47
SMYD3-201ENST00000366516 RRP1P56182 461 aaKnown RBP12.09□□□□□ -0.47
SMYD3-201ENST00000366516 TDRD9Q8NDG6 1382 aaKnown RBP12.09□□□□□ -0.47
SMYD3-201ENST00000366516 CDK13Q14004 1512 aaKnown RBP12.09□□□□□ -0.47
SMYD3-201ENST00000366516 PZPP20742 1482 aa12.09□□□□□ -0.47
SMYD3-201ENST00000366516 RIMBP3CA6NJZ7 1639 aa12.08□□□□□ -0.48
SMYD3-201ENST00000366516 RIMBP3BA6NNM3 1639 aa12.08□□□□□ -0.48
SMYD3-201ENST00000366516 RIMBP3Q9UFD9 1639 aa12.08□□□□□ -0.48
SMYD3-201ENST00000366516 PBRM1Q86U86 1689 aa12.08□□□□□ -0.48
SMYD3-201ENST00000366516 BCORL1Q5H9F3 1711 aa12.07□□□□□ -0.48
SMYD3-201ENST00000366516 PLEKHH2Q8IVE3 1493 aa12.06□□□□□ -0.48
SMYD3-201ENST00000366516 ADAMTS12P58397 1594 aa12.06□□□□□ -0.48
SMYD3-201ENST00000366516 CROCC2H7BZ55 1655 aa12.06□□□□□ -0.48
SMYD3-201ENST00000366516 E9PCH4 1651 aa12.05□□□□□ -0.48
SMYD3-201ENST00000366516 TARBP1Q13395 1621 aaKnown RBP12.05□□□□□ -0.48
SMYD3-201ENST00000366516 RCAN3Q9UKA8 241 aa12.04□□□□□ -0.48
SMYD3-201ENST00000366516 NEFMP07197 916 aa12.04□□□□□ -0.48
SMYD3-201ENST00000366516 BACH2Q9BYV9 841 aa12.04□□□□□ -0.48
SMYD3-201ENST00000366516 ANKRD30AQ9BXX3 1397 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms