RNA–Protein interactions for RNA: ENST00000364033.1

RNU1-42P-201, Transcript of RNA, U1 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU1-42P, Length 160 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-42P-201ENST00000364033 FBXO31Q5XUX0 539 aaPredicted RBP2.48□□□□□ -2.01
RNU1-42P-201ENST00000364033 CFDP1Q9UEE9 299 aaPredicted RBP2.48□□□□□ -2.01
RNU1-42P-201ENST00000364033 PHLDB1Q86UU1 1377 aa2.48□□□□□ -2.01
RNU1-42P-201ENST00000364033 ZNF335Q9H4Z2 1342 aaPredicted RBP2.47□□□□□ -2.01
RNU1-42P-201ENST00000364033 RBM33Q96EV2 1170 aaKnown RBP2.47□□□□□ -2.01
RNU1-42P-201ENST00000364033 DMRT2Q9Y5R5 561 aa2.47□□□□□ -2.01
RNU1-42P-201ENST00000364033 PLCH2O75038 1416 aa2.47□□□□□ -2.01
RNU1-42P-201ENST00000364033 TRAPPC8Q9Y2L5 1435 aa2.47□□□□□ -2.01
RNU1-42P-201ENST00000364033 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.47□□□□□ -2.015e-30■■■■■ 114.7
RNU1-42P-201ENST00000364033 RAPGEF6Q8TEU7 1601 aa2.46□□□□□ -2.02
RNU1-42P-201ENST00000364033 ATP10AO60312 1499 aa2.46□□□□□ -2.02
RNU1-42P-201ENST00000364033 NEO1Q92859 1461 aa2.46□□□□□ -2.02
RNU1-42P-201ENST00000364033 SPAG9O60271 1321 aaKnown RBP2.46□□□□□ -2.02
RNU1-42P-201ENST00000364033 POGZQ7Z3K3 1410 aa2.46□□□□□ -2.02
RNU1-42P-201ENST00000364033 KIF3BO15066 747 aa2.46□□□□□ -2.02
RNU1-42P-201ENST00000364033 GRWD1Q9BQ67 446 aaKnown RBP eCLIP2.46□□□□□ -2.02
RNU1-42P-201ENST00000364033 ZMYM3Q14202 1370 aa2.46□□□□□ -2.02
RNU1-42P-201ENST00000364033 MADDQ8WXG6 1647 aa2.46□□□□□ -2.02
RNU1-42P-201ENST00000364033 ARHGAP35Q9NRY4 1499 aa2.45□□□□□ -2.02
RNU1-42P-201ENST00000364033 ADAMTSL3P82987 1691 aa2.45□□□□□ -2.02
RNU1-42P-201ENST00000364033 RIMS1Q86UR5 1692 aaKnown RBP2.45□□□□□ -2.02
RNU1-42P-201ENST00000364033 CFAP43Q8NDM7 1665 aa2.45□□□□□ -2.02
RNU1-42P-201ENST00000364033 HSPA1LP34931 641 aa2.45□□□□□ -2.02
RNU1-42P-201ENST00000364033 PPARGC1BQ86YN6 1023 aaKnown RBP2.45□□□□□ -2.02
RNU1-42P-201ENST00000364033 ARHGAP5Q13017 1502 aa2.45□□□□□ -2.02
RNU1-42P-201ENST00000364033 ZFYVE16Q7Z3T8 1539 aa2.45□□□□□ -2.02
RNU1-42P-201ENST00000364033 ARHGEF12Q9NZN5 1544 aa2.45□□□□□ -2.02
RNU1-42P-201ENST00000364033 HECW1Q76N89 1606 aa2.45□□□□□ -2.02
RNU1-42P-201ENST00000364033 ABCA9Q8IUA7 1624 aa2.45□□□□□ -2.02
RNU1-42P-201ENST00000364033 PCF11O94913 1555 aaKnown RBP2.44□□□□□ -2.02
RNU1-42P-201ENST00000364033 FRMPD1Q5SYB0 1578 aa2.44□□□□□ -2.02
RNU1-42P-201ENST00000364033 WASHC2CQ9Y4E1 1318 aa2.44□□□□□ -2.02
RNU1-42P-201ENST00000364033 CTTNBP2Q8WZ74 1663 aa2.44□□□□□ -2.02
RNU1-42P-201ENST00000364033 TROQ12816 1431 aaPredicted RBP2.44□□□□□ -2.02
RNU1-42P-201ENST00000364033 C9orf84Q5VXU9 1444 aa2.44□□□□□ -2.02
RNU1-42P-201ENST00000364033 KANK4Q5T7N3 995 aaPredicted RBP2.44□□□□□ -2.02
RNU1-42P-201ENST00000364033 BCANQ96GW7 911 aa2.44□□□□□ -2.02
RNU1-42P-201ENST00000364033 RRP7BPQ9NSQ0 103 aa2.44□□□□□ -2.02
RNU1-42P-201ENST00000364033 CHIC2Q9UKJ5 165 aa2.44□□□□□ -2.02
RNU1-42P-201ENST00000364033 PPP6R1Q9UPN7 881 aa2.44□□□□□ -2.02
RNU1-42P-201ENST00000364033 BCORL1Q5H9F3 1711 aa2.44□□□□□ -2.02
RNU1-42P-201ENST00000364033 SIGLEC1Q9BZZ2 1709 aa2.44□□□□□ -2.02
RNU1-42P-201ENST00000364033 CCNB3Q8WWL7 1395 aa2.44□□□□□ -2.02
RNU1-42P-201ENST00000364033 SAMD9Q5K651 1589 aa2.44□□□□□ -2.02
RNU1-42P-201ENST00000364033 TTC37Q6PGP7 1564 aa2.44□□□□□ -2.02
RNU1-42P-201ENST00000364033 CLIP1P30622 1438 aa2.43□□□□□ -2.02
RNU1-42P-201ENST00000364033 EEA1Q15075 1411 aa2.43□□□□□ -2.02
RNU1-42P-201ENST00000364033 FMN1Q68DA7 1419 aa2.43□□□□□ -2.02
RNU1-42P-201ENST00000364033 UHRF1BP1Q6BDS2 1440 aa2.43□□□□□ -2.02
RNU1-42P-201ENST00000364033 TOM1O60784 492 aa2.43□□□□□ -2.02
RNU1-42P-201ENST00000364033 TSPY4P0CV99 314 aa2.43□□□□□ -2.02
RNU1-42P-201ENST00000364033 TSPY10P0CW01 314 aa2.43□□□□□ -2.02
RNU1-42P-201ENST00000364033 NUTM2DQ5VT03 806 aaPredicted RBP2.43□□□□□ -2.02
RNU1-42P-201ENST00000364033 ANKLE2Q86XL3 938 aa2.43□□□□□ -2.02
RNU1-42P-201ENST00000364033 PHF23Q9BUL5 403 aaPredicted RBP2.43□□□□□ -2.02
RNU1-42P-201ENST00000364033 PCDH10Q9P2E7 1040 aa2.43□□□□□ -2.02
RNU1-42P-201ENST00000364033 STAG3Q9UJ98 1225 aa2.43□□□□□ -2.02
RNU1-42P-201ENST00000364033 MTUS2Q5JR59 1369 aa2.43□□□□□ -2.02
RNU1-42P-201ENST00000364033 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.43□□□□□ -2.02
RNU1-42P-201ENST00000364033 KIF14Q15058 1648 aa2.42□□□□□ -2.02
RNU1-42P-201ENST00000364033 MAGI2Q86UL8 1455 aa2.42□□□□□ -2.02
RNU1-42P-201ENST00000364033 CHGAP10645 457 aaKnown RBP2.42□□□□□ -2.02
RNU1-42P-201ENST00000364033 LTKP29376 864 aa2.42□□□□□ -2.02
RNU1-42P-201ENST00000364033 ITGAEP38570 1179 aa2.42□□□□□ -2.02
RNU1-42P-201ENST00000364033 PKD2Q13563 968 aa2.42□□□□□ -2.02
RNU1-42P-201ENST00000364033 TXNDC2Q86VQ3 553 aa2.42□□□□□ -2.02
RNU1-42P-201ENST00000364033 THEMISQ8N1K5 641 aaPredicted RBP2.42□□□□□ -2.02
RNU1-42P-201ENST00000364033 SLC26A8Q96RN1 970 aa2.42□□□□□ -2.02
RNU1-42P-201ENST00000364033 RICTORQ6R327 1708 aa2.42□□□□□ -2.02
RNU1-42P-201ENST00000364033 EFCAB5A4FU69 1503 aa2.42□□□□□ -2.02
RNU1-42P-201ENST00000364033 GPATCH8Q9UKJ3 1502 aaKnown RBP2.42□□□□□ -2.02
RNU1-42P-201ENST00000364033 CASKIN1Q8WXD9 1431 aa2.42□□□□□ -2.02
RNU1-42P-201ENST00000364033 ZNF518AQ6AHZ1 1483 aa2.41□□□□□ -2.02
RNU1-42P-201ENST00000364033 MLH3Q9UHC1 1453 aa2.41□□□□□ -2.02
RNU1-42P-201ENST00000364033 DHX29Q7Z478 1369 aaKnown RBP2.41□□□□□ -2.02
RNU1-42P-201ENST00000364033 SLC34A2O95436 690 aa2.41□□□□□ -2.02
RNU1-42P-201ENST00000364033 PROSER2Q86WR7 435 aaPredicted RBP2.41□□□□□ -2.02
RNU1-42P-201ENST00000364033 RGS17Q9UGC6 210 aaPredicted RBP2.41□□□□□ -2.02
RNU1-42P-201ENST00000364033 ARHGEF40Q8TER5 1519 aa2.41□□□□□ -2.02
RNU1-42P-201ENST00000364033 PTPRTO14522 1441 aa2.41□□□□□ -2.02
RNU1-42P-201ENST00000364033 PTPRKQ15262 1439 aa2.41□□□□□ -2.02
RNU1-42P-201ENST00000364033 NCOA1Q15788 1441 aa2.41□□□□□ -2.02
RNU1-42P-201ENST00000364033 A2MP01023 1474 aa2.4□□□□□ -2.02
RNU1-42P-201ENST00000364033 TNRQ92752 1358 aa2.4□□□□□ -2.02
RNU1-42P-201ENST00000364033 CAMSAP1Q5T5Y3 1602 aa2.4□□□□□ -2.03
RNU1-42P-201ENST00000364033 NUTM2BA6NNL0 878 aaPredicted RBP2.4□□□□□ -2.03
RNU1-42P-201ENST00000364033 NUTM2EB1AL46 878 aaPredicted RBP2.4□□□□□ -2.03
RNU1-42P-201ENST00000364033 APLP2Q06481 763 aa2.4□□□□□ -2.03
RNU1-42P-201ENST00000364033 IDI1Q13907 227 aa2.4□□□□□ -2.03
RNU1-42P-201ENST00000364033 FAM50AQ14320 339 aaKnown RBP2.4□□□□□ -2.03
RNU1-42P-201ENST00000364033 POTEAQ6S8J7 498 aa2.4□□□□□ -2.03
RNU1-42P-201ENST00000364033 NUTM2AQ8IVF1 878 aaPredicted RBP2.4□□□□□ -2.03
RNU1-42P-201ENST00000364033 FER1L4A9Z1Z3 1794 aa2.4□□□□□ -2.03
RNU1-42P-201ENST00000364033 STRCQ7RTU9 1775 aa2.4□□□□□ -2.03
RNU1-42P-201ENST00000364033 DIP2CQ9Y2E4 1556 aa2.4□□□□□ -2.03
RNU1-42P-201ENST00000364033 SUPT6HQ7KZ85 1726 aaKnown RBP2.39□□□□□ -2.03
RNU1-42P-201ENST00000364033 LTBP4Q8N2S1 1624 aa2.39□□□□□ -2.03
RNU1-42P-201ENST00000364033 ZMYM4Q5VZL5 1548 aa2.39□□□□□ -2.03
RNU1-42P-201ENST00000364033 SYCP2Q9BX26 1530 aa2.39□□□□□ -2.03
RNU1-42P-201ENST00000364033 PLEKHG5O94827 1062 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms