RNA–Protein interactions for RNA: ENST00000361813.5

SMG5-201, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG5, Length 4,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-201ENST00000361813 NLRP13Q86W25 1043 aa22.96■■□□□ 1.27
SMG5-201ENST00000361813 SMARCA4P51532 1647 aa22.94■■□□□ 1.26
SMG5-201ENST00000361813 SMARCA2P51531 1590 aa22.94■■□□□ 1.26
SMG5-201ENST00000361813 HSP90AB1P08238 724 aaKnown RBP22.93■■□□□ 1.26
SMG5-201ENST00000361813 PDE3BQ13370 1112 aa22.92■■□□□ 1.26
SMG5-201ENST00000361813 RRP1P56182 461 aaKnown RBP22.92■■□□□ 1.26
SMG5-201ENST00000361813 CCDC18Q5T9S5 1454 aa22.92■■□□□ 1.26
SMG5-201ENST00000361813 ARID4BQ4LE39 1312 aaPredicted RBP22.92■■□□□ 1.26
SMG5-201ENST00000361813 PHLDB1Q86UU1 1377 aa22.91■■□□□ 1.26
SMG5-201ENST00000361813 ROCK2O75116 1388 aaKnown RBP22.91■■□□□ 1.26
SMG5-201ENST00000361813 PTMAP06454 111 aaKnown RBP22.91■■□□□ 1.26
SMG5-201ENST00000361813 WASHC2AQ641Q2 1341 aa22.89■■□□□ 1.26
SMG5-201ENST00000361813 NUP155O75694 1391 aa22.89■■□□□ 1.26
SMG5-201ENST00000361813 ST20-MTHFSA0A0A6YYL1 179 aa22.89■■□□□ 1.26
SMG5-201ENST00000361813 HSCBQ8IWL3 235 aa22.89■■□□□ 1.26
SMG5-201ENST00000361813 GSE1Q14687 1217 aa22.89■■□□□ 1.25
SMG5-201ENST00000361813 TDRD9Q8NDG6 1382 aaKnown RBP22.89■■□□□ 1.25
SMG5-201ENST00000361813 TPRNQ4KMQ1 711 aa22.87■■□□□ 1.25
SMG5-201ENST00000361813 PAK3O75914 559 aaPredicted RBP22.87■■□□□ 1.25
SMG5-201ENST00000361813 PNNQ9H307 717 aaKnown RBP22.86■■□□□ 1.25
SMG5-201ENST00000361813 DNTTIP2Q5QJE6 756 aaKnown RBP22.86■■□□□ 1.25
SMG5-201ENST00000361813 MAPK8IP3Q9UPT6 1336 aa22.85■■□□□ 1.25
SMG5-201ENST00000361813 U2SURPO15042 1029 aaKnown RBP22.84■■□□□ 1.25
SMG5-201ENST00000361813 GOLGA2Q08379 1002 aa22.84■■□□□ 1.25
SMG5-201ENST00000361813 MYBBP1AQ9BQG0 1328 aaKnown RBP22.84■■□□□ 1.25
SMG5-201ENST00000361813 MSH5O43196 834 aa22.84■■□□□ 1.25
SMG5-201ENST00000361813 ATAD2BQ9ULI0 1458 aa22.83■■□□□ 1.25
SMG5-201ENST00000361813 CRBNQ96SW2 442 aa22.83■■□□□ 1.24
SMG5-201ENST00000361813 RRBP1Q9P2E9 1410 aaKnown RBP22.82■■□□□ 1.24
SMG5-201ENST00000361813 CCDC7Q96M83 1385 aa22.82■■□□□ 1.24
SMG5-201ENST00000361813 KIF15Q9NS87 1388 aa22.81■■□□□ 1.24
SMG5-201ENST00000361813 KIF7Q2M1P5 1343 aa22.81■■□□□ 1.24
SMG5-201ENST00000361813 ARAP1Q96P48 1450 aa22.8■■□□□ 1.24
SMG5-201ENST00000361813 MS4A1P11836 297 aa22.8■■□□□ 1.24
SMG5-201ENST00000361813 CCDC146Q8IYE0 955 aa22.8■■□□□ 1.24
SMG5-201ENST00000361813 FAM161AQ3B820 660 aa22.77■■□□□ 1.24
SMG5-201ENST00000361813 MORC1Q86VD1 984 aa22.77■■□□□ 1.24
SMG5-201ENST00000361813 USP47Q96K76 1375 aa22.77■■□□□ 1.24
SMG5-201ENST00000361813 CCDC184Q52MB2 194 aa22.76■■□□□ 1.23
SMG5-201ENST00000361813 GOLGA6L3A6NEY3 463 aa22.76■■□□□ 1.23
SMG5-201ENST00000361813 CLUAP1Q96AJ1 413 aa22.75■■□□□ 1.23
SMG5-201ENST00000361813 CNTLNQ9NXG0 1405 aa22.75■■□□□ 1.23
SMG5-201ENST00000361813 CENPQQ7L2Z9 268 aaPredicted RBP22.75■■□□□ 1.23
SMG5-201ENST00000361813 IGF1RP08069 1367 aa22.74■■□□□ 1.23
SMG5-201ENST00000361813 UACAQ9BZF9 1416 aa22.73■■□□□ 1.23
SMG5-201ENST00000361813 ANKRD30AQ9BXX3 1397 aa22.73■■□□□ 1.23
SMG5-201ENST00000361813 CASC1Q6TDU7 716 aa22.73■■□□□ 1.23
SMG5-201ENST00000361813 NPM1P06748 294 aaKnown RBP eCLIP22.73■■□□□ 1.23
SMG5-201ENST00000361813 RWDD1Q9H446 243 aaPredicted RBP22.73■■□□□ 1.23
SMG5-201ENST00000361813 MFAP1P55081 439 aaKnown RBP22.72■■□□□ 1.23
SMG5-201ENST00000361813 LRRC9Q6ZRR7 1453 aa22.72■■□□□ 1.23
SMG5-201ENST00000361813 MSNP26038 577 aaKnown RBP22.72■■□□□ 1.23
SMG5-201ENST00000361813 PLCB2Q00722 1185 aa22.72■■□□□ 1.23
SMG5-201ENST00000361813 PANK3Q9H999 370 aa22.71■■□□□ 1.23
SMG5-201ENST00000361813 FGD6Q6ZV73 1430 aa22.71■■□□□ 1.23
SMG5-201ENST00000361813 IL27Q8NEV9 243 aa22.7■■□□□ 1.23
SMG5-201ENST00000361813 ESF1Q9H501 851 aaKnown RBP22.69■■□□□ 1.22
SMG5-201ENST00000361813 ANO8Q9HCE9 1232 aaPredicted RBP22.68■■□□□ 1.22
SMG5-201ENST00000361813 WDR97A6NE52 1622 aa22.68■■□□□ 1.22
SMG5-201ENST00000361813 NFKBIBQ15653 356 aa22.66■■□□□ 1.22
SMG5-201ENST00000361813 PMFBP1Q8TBY8 1022 aa22.66■■□□□ 1.22
SMG5-201ENST00000361813 GBP4Q96PP9 640 aa22.66■■□□□ 1.22
SMG5-201ENST00000361813 AKNAQ7Z591 1439 aa22.65■■□□□ 1.22
SMG5-201ENST00000361813 CENPJQ9HC77 1338 aaPredicted RBP22.65■■□□□ 1.22
SMG5-201ENST00000361813 U2AF1L5P0DN76 240 aaPredicted RBP22.65■■□□□ 1.22
SMG5-201ENST00000361813 U2AF1Q01081 240 aaKnown RBP eCLIP22.65■■□□□ 1.224e-6■□□□□ 11.1
SMG5-201ENST00000361813 ITPRIPQ8IWB1 547 aa22.64■■□□□ 1.22
SMG5-201ENST00000361813 CADPSQ9ULU8 1353 aa22.64■■□□□ 1.21
SMG5-201ENST00000361813 RSPH6AQ9H0K4 717 aa22.64■■□□□ 1.21
SMG5-201ENST00000361813 CHMP4BQ9H444 224 aaKnown RBP22.63■■□□□ 1.21
SMG5-201ENST00000361813 HNRNPMP52272 730 aaKnown RBP eCLIP22.62■■□□□ 1.213e-8■■■■■ 27.9
SMG5-201ENST00000361813 SYNJ1O43426 1573 aa22.62■■□□□ 1.21
SMG5-201ENST00000361813 SAFB2Q14151 953 aaKnown RBP eCLIP22.61■■□□□ 1.21
SMG5-201ENST00000361813 BRPF3Q9ULD4 1205 aa22.6■■□□□ 1.21
SMG5-201ENST00000361813 ARID3AQ99856 593 aa22.6■■□□□ 1.21
SMG5-201ENST00000361813 ZBTB7CA1YPR0 619 aa22.59■■□□□ 1.21
SMG5-201ENST00000361813 CDCA7LQ96GN5 454 aa22.59■■□□□ 1.21
SMG5-201ENST00000361813 BCL2L13Q9BXK5 485 aa22.59■■□□□ 1.21
SMG5-201ENST00000361813 FOXD4L1Q9NU39 408 aa22.59■■□□□ 1.21
SMG5-201ENST00000361813 COG6Q9Y2V7 657 aa22.59■■□□□ 1.21
SMG5-201ENST00000361813 PLPPR3Q6T4P5 718 aa22.58■■□□□ 1.21
SMG5-201ENST00000361813 POGKQ9P215 609 aa22.58■■□□□ 1.21
SMG5-201ENST00000361813 RRP7AQ9Y3A4 280 aaKnown RBP22.58■■□□□ 1.2
SMG5-201ENST00000361813 APBB1O00213 710 aa22.57■■□□□ 1.2
SMG5-201ENST00000361813 SMC4Q9NTJ3 1288 aa22.56■■□□□ 1.2
SMG5-201ENST00000361813 APAF1O14727 1248 aa22.55■■□□□ 1.2
SMG5-201ENST00000361813 MYOM3Q5VTT5 1437 aa22.55■■□□□ 1.2
SMG5-201ENST00000361813 IPO8O15397 1037 aaKnown RBP22.55■■□□□ 1.2
SMG5-201ENST00000361813 ZNF644Q9H582 1327 aaPredicted RBP22.55■■□□□ 1.2
SMG5-201ENST00000361813 NBPF8Q3BBV2 869 aa22.54■■□□□ 1.2
SMG5-201ENST00000361813 HSP90AA2PQ14568 343 aaPredicted RBP22.53■■□□□ 1.2
SMG5-201ENST00000361813 SRPK2P78362 688 aaKnown RBP22.53■■□□□ 1.2
SMG5-201ENST00000361813 PRXQ9BXM0 1461 aa22.51■■□□□ 1.19
SMG5-201ENST00000361813 BACH2Q9BYV9 841 aa22.5■■□□□ 1.19
SMG5-201ENST00000361813 ERICH3Q5RHP9 1530 aa22.5■■□□□ 1.19
SMG5-201ENST00000361813 CGNL1Q0VF96 1302 aa22.49■■□□□ 1.19
SMG5-201ENST00000361813 PNISRQ8TF01 805 aaKnown RBP22.48■■□□□ 1.19
SMG5-201ENST00000361813 E9PSI1 815 aa22.48■■□□□ 1.19
SMG5-201ENST00000361813 FRAT2O75474 233 aaPredicted RBP22.48■■□□□ 1.19
SMG5-201ENST00000361813 VSIG10Q8N0Z9 540 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms