RNA–Protein interactions for RNA: ENST00000361427.5

HMGN2-201, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN2, Length 1,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-201ENST00000361427 ZNF467Q7Z7K2 595 aaPredicted RBP12.78□□□□□ -0.36
HMGN2-201ENST00000361427 CADPSQ9ULU8 1353 aa12.78□□□□□ -0.36
HMGN2-201ENST00000361427 MKRN3Q13064 507 aaKnown RBP12.77□□□□□ -0.37
HMGN2-201ENST00000361427 KRTAP3-3Q9BYR6 98 aa12.76□□□□□ -0.37
HMGN2-201ENST00000361427 KRTAP3-2Q9BYR7 98 aa12.76□□□□□ -0.37
HMGN2-201ENST00000361427 CHRM1P11229 460 aaPredicted RBP12.75□□□□□ -0.37
HMGN2-201ENST00000361427 ERCC6Q03468 1493 aa12.75□□□□□ -0.37
HMGN2-201ENST00000361427 GSE1Q14687 1217 aa12.74□□□□□ -0.37
HMGN2-201ENST00000361427 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.74□□□□□ -0.37
HMGN2-201ENST00000361427 GOLGA2Q08379 1002 aa12.73□□□□□ -0.37
HMGN2-201ENST00000361427 ILDR1Q86SU0 546 aaPredicted RBP12.73□□□□□ -0.37
HMGN2-201ENST00000361427 HS3ST6Q96QI5 342 aa12.73□□□□□ -0.37
HMGN2-201ENST00000361427 PDS5BQ9NTI5 1447 aa12.71□□□□□ -0.37
HMGN2-201ENST00000361427 PSEN1P49768 467 aa12.71□□□□□ -0.37
HMGN2-201ENST00000361427 CFTRP13569 1480 aa12.71□□□□□ -0.38
HMGN2-201ENST00000361427 FAM205CA6NFA0 338 aa12.7□□□□□ -0.38
HMGN2-201ENST00000361427 CCDC88BA6NC98 1476 aa12.7□□□□□ -0.38
HMGN2-201ENST00000361427 CUX2O14529 1486 aa12.68□□□□□ -0.38
HMGN2-201ENST00000361427 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.68□□□□□ -0.38
HMGN2-201ENST00000361427 DPY19L2Q6NUT2 758 aa12.67□□□□□ -0.38
HMGN2-201ENST00000361427 KLHL34Q8N239 644 aa12.67□□□□□ -0.38
HMGN2-201ENST00000361427 IFNLR1Q8IU57 520 aaPredicted RBP12.66□□□□□ -0.38
HMGN2-201ENST00000361427 KIF21AQ7Z4S6 1674 aa12.66□□□□□ -0.38
HMGN2-201ENST00000361427 THOC2Q8NI27 1593 aaKnown RBP12.65□□□□□ -0.38
HMGN2-201ENST00000361427 PKD2Q13563 968 aa12.65□□□□□ -0.38
HMGN2-201ENST00000361427 HOXB3P14651 431 aaPredicted RBP12.62□□□□□ -0.39
HMGN2-201ENST00000361427 KDM2AQ9Y2K7 1162 aa12.62□□□□□ -0.39
HMGN2-201ENST00000361427 BBXQ8WY36 941 aaPredicted RBP12.61□□□□□ -0.39
HMGN2-201ENST00000361427 DNAJC5Q9H3Z4 198 aa12.61□□□□□ -0.39
HMGN2-201ENST00000361427 FANCD2Q9BXW9 1451 aa12.6□□□□□ -0.39
HMGN2-201ENST00000361427 PDAP1Q13442 181 aaKnown RBP12.59□□□□□ -0.39
HMGN2-201ENST00000361427 MRC2Q9UBG0 1479 aa12.59□□□□□ -0.39
HMGN2-201ENST00000361427 CEP164Q9UPV0 1460 aa12.58□□□□□ -0.4
HMGN2-201ENST00000361427 WDR62O43379 1518 aa12.57□□□□□ -0.4
HMGN2-201ENST00000361427 BOLA1Q9Y3E2 137 aa12.56□□□□□ -0.4
HMGN2-201ENST00000361427 PAXIP1Q6ZW49 1069 aaPredicted RBP12.55□□□□□ -0.4
HMGN2-201ENST00000361427 PRDM2Q13029 1718 aa12.54□□□□□ -0.4
HMGN2-201ENST00000361427 SUPT5HO00267 1087 aaKnown RBP12.54□□□□□ -0.4
HMGN2-201ENST00000361427 HOXB1P14653 301 aaPredicted RBP12.54□□□□□ -0.4
HMGN2-201ENST00000361427 CABP2Q9NPB3 220 aa12.54□□□□□ -0.4
HMGN2-201ENST00000361427 CFAP44Q96MT7 982 aa12.52□□□□□ -0.41
HMGN2-201ENST00000361427 URB2Q14146 1524 aaKnown RBP12.5□□□□□ -0.41
HMGN2-201ENST00000361427 G3V3G9 751 aa12.48□□□□□ -0.41
HMGN2-201ENST00000361427 ZNF710Q8N1W2 664 aa12.47□□□□□ -0.41
HMGN2-201ENST00000361427 ERBB3P21860 1342 aa12.45□□□□□ -0.42
HMGN2-201ENST00000361427 DOK7Q18PE1 504 aa12.45□□□□□ -0.42
HMGN2-201ENST00000361427 ECM2O94769 699 aaPredicted RBP12.43□□□□□ -0.42
HMGN2-201ENST00000361427 SPOCK2Q92563 424 aa12.41□□□□□ -0.42
HMGN2-201ENST00000361427 CIZ1Q9ULV3 898 aaPredicted RBP12.41□□□□□ -0.42
HMGN2-201ENST00000361427 TOPBP1Q92547 1522 aa12.41□□□□□ -0.42
HMGN2-201ENST00000361427 ABCC8Q09428 1581 aa12.39□□□□□ -0.43
HMGN2-201ENST00000361427 SPRYD3Q8NCJ5 442 aa12.39□□□□□ -0.43
HMGN2-201ENST00000361427 RNF166Q96A37 237 aaPredicted RBP12.38□□□□□ -0.43
HMGN2-201ENST00000361427 DNMBPQ6XZF7 1577 aa12.38□□□□□ -0.43
HMGN2-201ENST00000361427 VARS2Q5ST30 1063 aaKnown RBP12.37□□□□□ -0.43
HMGN2-201ENST00000361427 TIMELESSQ9UNS1 1208 aa12.37□□□□□ -0.43
HMGN2-201ENST00000361427 TMEM92Q6UXU6 159 aa12.36□□□□□ -0.43
HMGN2-201ENST00000361427 EFCAB3Q8N7B9 438 aa12.36□□□□□ -0.43
HMGN2-201ENST00000361427 TSHZ2Q9NRE2 1034 aa12.35□□□□□ -0.43
HMGN2-201ENST00000361427 RIMBP2O15034 1052 aa12.34□□□□□ -0.43
HMGN2-201ENST00000361427 IFT140Q96RY7 1462 aa12.34□□□□□ -0.43
HMGN2-201ENST00000361427 TULP1O00294 542 aaPredicted RBP12.33□□□□□ -0.44
HMGN2-201ENST00000361427 NBR1Q14596 966 aa12.33□□□□□ -0.44
HMGN2-201ENST00000361427 ZNF687Q8N1G0 1237 aa12.32□□□□□ -0.44
HMGN2-201ENST00000361427 ZSWIM6Q9HCJ5 1215 aa12.32□□□□□ -0.44
HMGN2-201ENST00000361427 MYT1LQ9UL68 1186 aa12.32□□□□□ -0.44
HMGN2-201ENST00000361427 CUX1P39880 1505 aa12.32□□□□□ -0.44
HMGN2-201ENST00000361427 GPR153Q6NV75 609 aa12.31□□□□□ -0.44
HMGN2-201ENST00000361427 POLA1P09884 1462 aaPredicted RBP12.31□□□□□ -0.44
HMGN2-201ENST00000361427 MICALL2Q8IY33 904 aa12.3□□□□□ -0.44
HMGN2-201ENST00000361427 ZNF608Q9ULD9 1512 aaPredicted RBP12.29□□□□□ -0.44
HMGN2-201ENST00000361427 ERICH6Q7L0X2 663 aa12.29□□□□□ -0.44
HMGN2-201ENST00000361427 TARBP1Q13395 1621 aaKnown RBP12.29□□□□□ -0.44
HMGN2-201ENST00000361427 ARXQ96QS3 562 aa12.28□□□□□ -0.44
HMGN2-201ENST00000361427 DAXXQ9UER7 740 aaPredicted RBP12.28□□□□□ -0.44
HMGN2-201ENST00000361427 GTF3C3Q9Y5Q9 886 aa12.27□□□□□ -0.45
HMGN2-201ENST00000361427 FGD5Q6ZNL6 1462 aa12.26□□□□□ -0.45
HMGN2-201ENST00000361427 SOGA1O94964 1423 aa12.25□□□□□ -0.45
HMGN2-201ENST00000361427 RAD54L2Q9Y4B4 1467 aa12.25□□□□□ -0.45
HMGN2-201ENST00000361427 RGL2O15211 777 aa12.24□□□□□ -0.45
HMGN2-201ENST00000361427 MS4A4AQ96JQ5 239 aa12.23□□□□□ -0.45
HMGN2-201ENST00000361427 AQRO60306 1485 aaKnown RBP eCLIP12.21□□□□□ -0.459e-13■■■■□ 25.4
HMGN2-201ENST00000361427 SOX12O15370 315 aa12.21□□□□□ -0.45
HMGN2-201ENST00000361427 TRIM41Q8WV44 630 aa12.21□□□□□ -0.45
HMGN2-201ENST00000361427 EIF4G3O43432 1585 aaKnown RBP12.21□□□□□ -0.46
HMGN2-201ENST00000361427 WRNQ14191 1432 aaPredicted RBP eCLIP12.2□□□□□ -0.46
HMGN2-201ENST00000361427 TOP2BQ02880 1626 aa12.19□□□□□ -0.46
HMGN2-201ENST00000361427 TDRD9Q8NDG6 1382 aaKnown RBP12.18□□□□□ -0.46
HMGN2-201ENST00000361427 PTGER2P43116 358 aa12.18□□□□□ -0.46
HMGN2-201ENST00000361427 ARSIQ5FYB1 569 aa12.18□□□□□ -0.46
HMGN2-201ENST00000361427 WDR97A6NE52 1622 aa12.18□□□□□ -0.46
HMGN2-201ENST00000361427 BIVM-ERCC5R4GMW8 1640 aa12.18□□□□□ -0.46
HMGN2-201ENST00000361427 SYNJ1O43426 1573 aa12.18□□□□□ -0.46
HMGN2-201ENST00000361427 ABCA10Q8WWZ4 1543 aa12.16□□□□□ -0.46
HMGN2-201ENST00000361427 CHGAP10645 457 aaKnown RBP12.15□□□□□ -0.46
HMGN2-201ENST00000361427 ANKRD13DQ6ZTN6 518 aa12.15□□□□□ -0.46
HMGN2-201ENST00000361427 PHF8Q9UPP1 1060 aa12.15□□□□□ -0.46
HMGN2-201ENST00000361427 KHSRPQ92945 711 aaKnown RBP eCLIP12.13□□□□□ -0.473e-7■■■■□ 22.7
HMGN2-201ENST00000361427 RNF25Q96BH1 459 aaPredicted RBP12.12□□□□□ -0.47
HMGN2-201ENST00000361427 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms