RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 RAPGEF6Q8TEU7 1601 aa4.21□□□□□ -1.74
LTN1-201ENST00000361371 CTTNBP2Q8WZ74 1663 aa4.21□□□□□ -1.74
LTN1-201ENST00000361371 KIF14Q15058 1648 aa4.21□□□□□ -1.74
LTN1-201ENST00000361371 KDM5BQ9UGL1 1544 aa4.21□□□□□ -1.74
LTN1-201ENST00000361371 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.21□□□□□ -1.74
LTN1-201ENST00000361371 HFM1A2PYH4 1435 aa4.21□□□□□ -1.74
LTN1-201ENST00000361371 ASXL2Q76L83 1435 aa4.2□□□□□ -1.74
LTN1-201ENST00000361371 SLC4A1APQ9BWU0 796 aaKnown RBP4.2□□□□□ -1.74
LTN1-201ENST00000361371 ABCC2Q92887 1545 aa4.2□□□□□ -1.74
LTN1-201ENST00000361371 NCOA1Q15788 1441 aa4.2□□□□□ -1.74
LTN1-201ENST00000361371 HECW1Q76N89 1606 aa4.2□□□□□ -1.74
LTN1-201ENST00000361371 CHD1O14646 1710 aa4.2□□□□□ -1.74
LTN1-201ENST00000361371 TCOF1Q13428 1488 aaKnown RBP4.2□□□□□ -1.74
LTN1-201ENST00000361371 PKD2Q13563 968 aa4.2□□□□□ -1.74
LTN1-201ENST00000361371 MYT1LQ9UL68 1186 aa4.2□□□□□ -1.74
LTN1-201ENST00000361371 FAM69CQ0P6D2 419 aa4.2□□□□□ -1.74
LTN1-201ENST00000361371 MAPKBP1O60336 1514 aa4.19□□□□□ -1.74
LTN1-201ENST00000361371 KDM6BO15054 1643 aa4.19□□□□□ -1.74
LTN1-201ENST00000361371 CAMSAP2Q08AD1 1489 aa4.19□□□□□ -1.74
LTN1-201ENST00000361371 AKNAQ7Z591 1439 aa4.19□□□□□ -1.74
LTN1-201ENST00000361371 PLCH2O75038 1416 aa4.19□□□□□ -1.74
LTN1-201ENST00000361371 LRRIQ1Q96JM4 1722 aa4.19□□□□□ -1.74
LTN1-201ENST00000361371 PPP1R15AO75807 674 aaPredicted RBP4.19□□□□□ -1.74
LTN1-201ENST00000361371 NBPF8Q3BBV2 869 aa4.19□□□□□ -1.74
LTN1-201ENST00000361371 L3MBTL2Q969R5 705 aa4.19□□□□□ -1.74
LTN1-201ENST00000361371 SHROOM2Q13796 1616 aa4.18□□□□□ -1.74
LTN1-201ENST00000361371 SCAPERQ9BY12 1400 aa4.18□□□□□ -1.74
LTN1-201ENST00000361371 SENP3Q9H4L4 574 aaPredicted RBP4.18□□□□□ -1.74
LTN1-201ENST00000361371 NUP155O75694 1391 aa4.18□□□□□ -1.74
LTN1-201ENST00000361371 KIF15Q9NS87 1388 aa4.18□□□□□ -1.74
LTN1-201ENST00000361371 ANKRD50Q9ULJ7 1429 aa4.18□□□□□ -1.74
LTN1-201ENST00000361371 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.18□□□□□ -1.74
LTN1-201ENST00000361371 UHRF1BP1LA0JNW5 1464 aa4.17□□□□□ -1.74
LTN1-201ENST00000361371 KIF3BO15066 747 aa4.17□□□□□ -1.74
LTN1-201ENST00000361371 CFAP43Q8NDM7 1665 aa4.17□□□□□ -1.74
LTN1-201ENST00000361371 SPAG9O60271 1321 aaKnown RBP4.17□□□□□ -1.74
LTN1-201ENST00000361371 PLEKHH2Q8IVE3 1493 aa4.17□□□□□ -1.74
LTN1-201ENST00000361371 ANKRD30AQ9BXX3 1397 aa4.17□□□□□ -1.74
LTN1-201ENST00000361371 RGL3Q3MIN7 710 aa4.17□□□□□ -1.74
LTN1-201ENST00000361371 ZNF326Q5BKZ1 582 aaKnown RBP4.17□□□□□ -1.74
LTN1-201ENST00000361371 C9orf84Q5VXU9 1444 aa4.17□□□□□ -1.74
LTN1-201ENST00000361371 GGT6Q6P531 493 aa4.16□□□□□ -1.74
LTN1-201ENST00000361371 PTPN23Q9H3S7 1636 aa4.16□□□□□ -1.74
LTN1-201ENST00000361371 ZNF316A6NFI3 1004 aaPredicted RBP4.16□□□□□ -1.74
LTN1-201ENST00000361371 WDR7Q9Y4E6 1490 aa4.16□□□□□ -1.74
LTN1-201ENST00000361371 CD109Q6YHK3 1445 aa4.16□□□□□ -1.74
LTN1-201ENST00000361371 COL17A1Q9UMD9 1497 aaPredicted RBP4.16□□□□□ -1.74
LTN1-201ENST00000361371 KDM2AQ9Y2K7 1162 aa4.16□□□□□ -1.74
LTN1-201ENST00000361371 ARHGAP5Q13017 1502 aa4.16□□□□□ -1.74
LTN1-201ENST00000361371 TTC37Q6PGP7 1564 aa4.16□□□□□ -1.74
LTN1-201ENST00000361371 ADCY10Q96PN6 1610 aa4.16□□□□□ -1.74
LTN1-201ENST00000361371 ROCK1Q13464 1354 aa4.15□□□□□ -1.74
LTN1-201ENST00000361371 ANKRD30BQ9BXX2 1392 aa4.15□□□□□ -1.74
LTN1-201ENST00000361371 SYCP2Q9BX26 1530 aa4.15□□□□□ -1.75
LTN1-201ENST00000361371 PZPP20742 1482 aa4.15□□□□□ -1.75
LTN1-201ENST00000361371 FANCAO15360 1455 aa4.14□□□□□ -1.75
LTN1-201ENST00000361371 C11orf95C9JLR9 678 aaPredicted RBP4.14□□□□□ -1.75
LTN1-201ENST00000361371 MLECQ14165 292 aa4.14□□□□□ -1.75
LTN1-201ENST00000361371 MIER1Q8N108 512 aa4.14□□□□□ -1.75
LTN1-201ENST00000361371 CLSPNQ9HAW4 1339 aa4.14□□□□□ -1.75
LTN1-201ENST00000361371 DIEXFQ68CQ4 756 aaKnown RBP4.14□□□□□ -1.75
LTN1-201ENST00000361371 YEATS2Q9ULM3 1422 aa4.14□□□□□ -1.75
LTN1-201ENST00000361371 KIAA1107Q9UPP5 1409 aa4.14□□□□□ -1.75
LTN1-201ENST00000361371 PLA2R1Q13018 1463 aa4.14□□□□□ -1.75
LTN1-201ENST00000361371 CCDC141Q6ZP82 1450 aa4.14□□□□□ -1.75
LTN1-201ENST00000361371 SAMD9LQ8IVG5 1584 aa4.14□□□□□ -1.75
LTN1-201ENST00000361371 TRHP20396 242 aaPredicted RBP4.13□□□□□ -1.75
LTN1-201ENST00000361371 TONSLQ96HA7 1378 aa4.13□□□□□ -1.75
LTN1-201ENST00000361371 SUPT6HQ7KZ85 1726 aaKnown RBP4.13□□□□□ -1.75
LTN1-201ENST00000361371 RSPH4AQ5TD94 716 aa4.13□□□□□ -1.75
LTN1-201ENST00000361371 ADGRL1O94910 1474 aa4.13□□□□□ -1.75
LTN1-201ENST00000361371 DDX10Q13206 875 aaKnown RBP4.13□□□□□ -1.75
LTN1-201ENST00000361371 NBPF1Q3BBV0 1214 aa4.13□□□□□ -1.75
LTN1-201ENST00000361371 NUTM2DQ5VT03 806 aaPredicted RBP4.13□□□□□ -1.75
LTN1-201ENST00000361371 CNGB1Q14028 1251 aaPredicted RBP4.12□□□□□ -1.75
LTN1-201ENST00000361371 FBXO31Q5XUX0 539 aaPredicted RBP4.12□□□□□ -1.75
LTN1-201ENST00000361371 DNAJC5Q9H3Z4 198 aa4.12□□□□□ -1.75
LTN1-201ENST00000361371 DCAF11Q8TEB1 546 aa4.12□□□□□ -1.75
LTN1-201ENST00000361371 ADGRL2O95490 1459 aa4.12□□□□□ -1.75
LTN1-201ENST00000361371 HSPA5P11021 654 aaKnown RBP4.12□□□□□ -1.75
LTN1-201ENST00000361371 ZCCHC11Q5TAX3 1644 aaKnown RBP4.11□□□□□ -1.75
LTN1-201ENST00000361371 DHX29Q7Z478 1369 aaKnown RBP4.11□□□□□ -1.75
LTN1-201ENST00000361371 PLPPR3Q6T4P5 718 aa4.11□□□□□ -1.75
LTN1-201ENST00000361371 CHGAP10645 457 aaKnown RBP4.1□□□□□ -1.75
LTN1-201ENST00000361371 RIMBP3CA6NJZ7 1639 aa4.1□□□□□ -1.75
LTN1-201ENST00000361371 RIMBP3BA6NNM3 1639 aa4.1□□□□□ -1.75
LTN1-201ENST00000361371 RIMBP3Q9UFD9 1639 aa4.1□□□□□ -1.75
LTN1-201ENST00000361371 DNMT1P26358 1616 aaKnown RBP4.1□□□□□ -1.75
LTN1-201ENST00000361371 CEBPAP49715 358 aaPredicted RBP4.1□□□□□ -1.75
LTN1-201ENST00000361371 YTHDC1Q96MU7 727 aaKnown RBP4.1□□□□□ -1.75
LTN1-201ENST00000361371 POGZQ7Z3K3 1410 aa4.09□□□□□ -1.75
LTN1-201ENST00000361371 POLR3GLQ9BT43 218 aa4.09□□□□□ -1.75
LTN1-201ENST00000361371 ABCC1P33527 1531 aa4.09□□□□□ -1.75
LTN1-201ENST00000361371 TIMELESSQ9UNS1 1208 aa4.09□□□□□ -1.75
LTN1-201ENST00000361371 WASHC2CQ9Y4E1 1318 aa4.09□□□□□ -1.76
LTN1-201ENST00000361371 SHANK2Q9UPX8 1470 aa4.09□□□□□ -1.76
LTN1-201ENST00000361371 SENP3-EIF4A1A0A087X0R7 540 aa4.08□□□□□ -1.76
LTN1-201ENST00000361371 ADGRF5Q8IZF2 1346 aa4.08□□□□□ -1.76
LTN1-201ENST00000361371 CFAP70Q5T0N1 1121 aa4.08□□□□□ -1.76
LTN1-201ENST00000361371 A2MP01023 1474 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms