RNA–Protein interactions for RNA: ENST00000361320.4

LRRTM3-201, Transcript of leucine rich repeat transmembrane neuronal 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM3, Length 4,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3-201ENST00000361320 PRXQ9BXM0 1461 aa9.61□□□□□ -0.87
LRRTM3-201ENST00000361320 MYT1Q01538 1121 aa9.6□□□□□ -0.87
LRRTM3-201ENST00000361320 SRPK2P78362 688 aaKnown RBP9.6□□□□□ -0.87
LRRTM3-201ENST00000361320 SOX12O15370 315 aa9.6□□□□□ -0.87
LRRTM3-201ENST00000361320 UACAQ9BZF9 1416 aa9.59□□□□□ -0.87
LRRTM3-201ENST00000361320 CDCA8Q53HL2 280 aa9.59□□□□□ -0.88
LRRTM3-201ENST00000361320 CANXP27824 592 aaKnown RBP9.57□□□□□ -0.88
LRRTM3-201ENST00000361320 FAM9BQ8IZU0 186 aa9.57□□□□□ -0.88
LRRTM3-201ENST00000361320 RAB3GAP2Q9H2M9 1393 aa9.57□□□□□ -0.88
LRRTM3-201ENST00000361320 NUTM2FA1L443 756 aa9.56□□□□□ -0.88
LRRTM3-201ENST00000361320 TNNT2P45379 298 aaPredicted RBP9.55□□□□□ -0.88
LRRTM3-201ENST00000361320 KNSTRNQ9Y448 316 aa9.55□□□□□ -0.88
LRRTM3-201ENST00000361320 ARAP1Q96P48 1450 aa9.55□□□□□ -0.88
LRRTM3-201ENST00000361320 CASKIN1Q8WXD9 1431 aa9.55□□□□□ -0.88
LRRTM3-201ENST00000361320 ARHGAP5Q13017 1502 aa9.55□□□□□ -0.88
LRRTM3-201ENST00000361320 ERICH3Q5RHP9 1530 aa9.55□□□□□ -0.88
LRRTM3-201ENST00000361320 PAK3O75914 559 aaPredicted RBP9.54□□□□□ -0.88
LRRTM3-201ENST00000361320 WDR43Q15061 677 aaKnown RBP eCLIP9.54□□□□□ -0.88
LRRTM3-201ENST00000361320 SCAPERQ9BY12 1400 aa9.54□□□□□ -0.88
LRRTM3-201ENST00000361320 PLB1Q6P1J6 1458 aa9.54□□□□□ -0.88
LRRTM3-201ENST00000361320 MYOM3Q5VTT5 1437 aa9.54□□□□□ -0.88
LRRTM3-201ENST00000361320 CLSPNQ9HAW4 1339 aa9.53□□□□□ -0.88
LRRTM3-201ENST00000361320 KIF15Q9NS87 1388 aa9.53□□□□□ -0.88
LRRTM3-201ENST00000361320 NPM2Q86SE8 214 aaKnown RBP9.53□□□□□ -0.88
LRRTM3-201ENST00000361320 IQGAP2Q13576 1575 aa9.53□□□□□ -0.88
LRRTM3-201ENST00000361320 KIF21BO75037 1637 aa9.53□□□□□ -0.88
LRRTM3-201ENST00000361320 CD109Q6YHK3 1445 aa9.52□□□□□ -0.89
LRRTM3-201ENST00000361320 MRS2Q9HD23 443 aa9.51□□□□□ -0.89
LRRTM3-201ENST00000361320 ZBTB47Q9UFB7 747 aaPredicted RBP9.51□□□□□ -0.89
LRRTM3-201ENST00000361320 TROQ12816 1431 aaPredicted RBP9.51□□□□□ -0.89
LRRTM3-201ENST00000361320 TMF1P82094 1093 aa9.51□□□□□ -0.89
LRRTM3-201ENST00000361320 PHLDB1Q86UU1 1377 aa9.5□□□□□ -0.89
LRRTM3-201ENST00000361320 NCOA2Q15596 1464 aa9.5□□□□□ -0.89
LRRTM3-201ENST00000361320 TRAK1Q9UPV9 953 aa9.5□□□□□ -0.89
LRRTM3-201ENST00000361320 KIF21AQ7Z4S6 1674 aa9.49□□□□□ -0.89
LRRTM3-201ENST00000361320 FGD6Q6ZV73 1430 aa9.49□□□□□ -0.89
LRRTM3-201ENST00000361320 VGFO15240 615 aaPredicted RBP9.49□□□□□ -0.89
LRRTM3-201ENST00000361320 L3MBTL2Q969R5 705 aa9.48□□□□□ -0.89
LRRTM3-201ENST00000361320 LRRC9Q6ZRR7 1453 aa9.48□□□□□ -0.89
LRRTM3-201ENST00000361320 EFCAB5A4FU69 1503 aa9.48□□□□□ -0.89
LRRTM3-201ENST00000361320 SENP3-EIF4A1A0A087X0R7 540 aa9.48□□□□□ -0.89
LRRTM3-201ENST00000361320 HNRNPUQ00839 825 aaKnown RBP eCLIP9.48□□□□□ -0.89
LRRTM3-201ENST00000361320 CFAP53Q96M91 514 aa9.48□□□□□ -0.89
LRRTM3-201ENST00000361320 NGDNQ8NEJ9 315 aaKnown RBP9.48□□□□□ -0.89
LRRTM3-201ENST00000361320 CCDC144AA2RUR9 1427 aa9.48□□□□□ -0.89
LRRTM3-201ENST00000361320 ARXQ96QS3 562 aa9.47□□□□□ -0.89
LRRTM3-201ENST00000361320 CDK13Q14004 1512 aaKnown RBP9.47□□□□□ -0.89
LRRTM3-201ENST00000361320 FYCO1Q9BQS8 1478 aa9.47□□□□□ -0.89
LRRTM3-201ENST00000361320 ROCK2O75116 1388 aaKnown RBP9.46□□□□□ -0.89
LRRTM3-201ENST00000361320 CC2D1BQ5T0F9 858 aaKnown RBP9.46□□□□□ -0.89
LRRTM3-201ENST00000361320 CCDC9Q9Y3X0 531 aaKnown RBP9.46□□□□□ -0.89
LRRTM3-201ENST00000361320 ANKRD50Q9ULJ7 1429 aa9.45□□□□□ -0.9
LRRTM3-201ENST00000361320 CUL7Q14999 1698 aa9.45□□□□□ -0.9
LRRTM3-201ENST00000361320 ERICH6Q7L0X2 663 aa9.45□□□□□ -0.9
LRRTM3-201ENST00000361320 HDGFL2Q7Z4V5 671 aaPredicted RBP9.45□□□□□ -0.9
LRRTM3-201ENST00000361320 TXNDC2Q86VQ3 553 aa9.45□□□□□ -0.9
LRRTM3-201ENST00000361320 WDR62O43379 1518 aa9.44□□□□□ -0.9
LRRTM3-201ENST00000361320 U2SURPO15042 1029 aaKnown RBP9.44□□□□□ -0.9
LRRTM3-201ENST00000361320 CSB-PGBD3P0DP91 1061 aa9.44□□□□□ -0.9
LRRTM3-201ENST00000361320 NEUROD2Q15784 382 aa9.44□□□□□ -0.9
LRRTM3-201ENST00000361320 EPRSP07814 1512 aaKnown RBP9.44□□□□□ -0.9
LRRTM3-201ENST00000361320 ARHGEF11O15085 1522 aa9.43□□□□□ -0.9
LRRTM3-201ENST00000361320 POGZQ7Z3K3 1410 aa9.43□□□□□ -0.9
LRRTM3-201ENST00000361320 TIMELESSQ9UNS1 1208 aa9.43□□□□□ -0.9
LRRTM3-201ENST00000361320 NUDCQ9Y266 331 aa9.42□□□□□ -0.9
LRRTM3-201ENST00000361320 THEMISQ8N1K5 641 aaPredicted RBP9.42□□□□□ -0.9
LRRTM3-201ENST00000361320 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.42□□□□□ -0.9
LRRTM3-201ENST00000361320 HSPA5P11021 654 aaKnown RBP9.41□□□□□ -0.9
LRRTM3-201ENST00000361320 CEBPAP49715 358 aaPredicted RBP9.41□□□□□ -0.9
LRRTM3-201ENST00000361320 MINK1Q8N4C8 1332 aaPredicted RBP9.41□□□□□ -0.9
LRRTM3-201ENST00000361320 BIVM-ERCC5R4GMW8 1640 aa9.41□□□□□ -0.9
LRRTM3-201ENST00000361320 MORC1Q86VD1 984 aa9.41□□□□□ -0.9
LRRTM3-201ENST00000361320 EIF4G3O43432 1585 aaKnown RBP9.41□□□□□ -0.9
LRRTM3-201ENST00000361320 HECW1Q76N89 1606 aa9.4□□□□□ -0.9
LRRTM3-201ENST00000361320 PLEKHH2Q8IVE3 1493 aa9.4□□□□□ -0.9
LRRTM3-201ENST00000361320 DAXXQ9UER7 740 aaPredicted RBP9.4□□□□□ -0.91
LRRTM3-201ENST00000361320 C9orf84Q5VXU9 1444 aa9.39□□□□□ -0.91
LRRTM3-201ENST00000361320 ASXL2Q76L83 1435 aa9.39□□□□□ -0.91
LRRTM3-201ENST00000361320 MAPK8IP3Q9UPT6 1336 aa9.39□□□□□ -0.91
LRRTM3-201ENST00000361320 ATF3P18847 181 aa9.39□□□□□ -0.91
LRRTM3-201ENST00000361320 ADGRL1O94910 1474 aa9.39□□□□□ -0.91
LRRTM3-201ENST00000361320 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.38□□□□□ -0.91
LRRTM3-201ENST00000361320 SLC26A8Q96RN1 970 aa9.38□□□□□ -0.91
LRRTM3-201ENST00000361320 PROSER2Q86WR7 435 aaPredicted RBP9.38□□□□□ -0.91
LRRTM3-201ENST00000361320 LAS1LQ9Y4W2 734 aaKnown RBP9.38□□□□□ -0.91
LRRTM3-201ENST00000361320 TMEM132EQ6IEE7 984 aa9.38□□□□□ -0.91
LRRTM3-201ENST00000361320 TERF2IPQ9NYB0 399 aa9.38□□□□□ -0.91
LRRTM3-201ENST00000361320 ANKLE2Q86XL3 938 aa9.37□□□□□ -0.91
LRRTM3-201ENST00000361320 EIF3AQ14152 1382 aaKnown RBP9.37□□□□□ -0.91
LRRTM3-201ENST00000361320 EHBP1L1Q8N3D4 1523 aa9.36□□□□□ -0.91
LRRTM3-201ENST00000361320 LTV1Q96GA3 475 aaPredicted RBP9.36□□□□□ -0.91
LRRTM3-201ENST00000361320 ST20-MTHFSA0A0A6YYL1 179 aa9.35□□□□□ -0.91
LRRTM3-201ENST00000361320 FANCAO15360 1455 aa9.35□□□□□ -0.91
LRRTM3-201ENST00000361320 DENND4BO75064 1496 aaPredicted RBP9.35□□□□□ -0.91
LRRTM3-201ENST00000361320 MIA2Q96PC5 1412 aa9.35□□□□□ -0.91
LRRTM3-201ENST00000361320 SLC52A1Q9NWF4 448 aa9.35□□□□□ -0.91
LRRTM3-201ENST00000361320 MIER1Q8N108 512 aa9.34□□□□□ -0.91
LRRTM3-201ENST00000361320 NPHP1O15259 732 aa9.34□□□□□ -0.91
LRRTM3-201ENST00000361320 PSME1Q06323 249 aa9.34□□□□□ -0.91
LRRTM3-201ENST00000361320 ATP10BO94823 1461 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms