RNA–Protein interactions for RNA: ENST00000361293.9

CHD1L-201, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2 BASIC

Gene CHD1L, Length 2,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-201ENST00000361293 ABCA8O94911 1581 aa28.8■■■□□ 2.2
CHD1L-201ENST00000361293 TRIM52Q96A61 297 aa28.8■■■□□ 2.2
CHD1L-201ENST00000361293 ADCY10Q96PN6 1610 aa28.78■■■□□ 2.2
CHD1L-201ENST00000361293 GPATCH8Q9UKJ3 1502 aaKnown RBP28.76■■■□□ 2.19
CHD1L-201ENST00000361293 ROCK1Q13464 1354 aa28.76■■■□□ 2.19
CHD1L-201ENST00000361293 HIRIP3Q9BW71 556 aaPredicted RBP28.75■■■□□ 2.19
CHD1L-201ENST00000361293 CAMSAP2Q08AD1 1489 aa28.75■■■□□ 2.19
CHD1L-201ENST00000361293 KDM5BQ9UGL1 1544 aa28.74■■■□□ 2.19
CHD1L-201ENST00000361293 ITSN2Q9NZM3 1697 aa28.74■■■□□ 2.19
CHD1L-201ENST00000361293 CFDP1Q9UEE9 299 aaPredicted RBP28.73■■■□□ 2.19
CHD1L-201ENST00000361293 CHD1O14646 1710 aa28.73■■■□□ 2.19
CHD1L-201ENST00000361293 ATP10BO94823 1461 aa28.72■■■□□ 2.19
CHD1L-201ENST00000361293 MPHOSPH9Q99550 1183 aa28.7■■■□□ 2.18
CHD1L-201ENST00000361293 ZNF777Q9ULD5 760 aaPredicted RBP28.67■■■□□ 2.18
CHD1L-201ENST00000361293 FOXD1Q16676 465 aa28.66■■■□□ 2.18
CHD1L-201ENST00000361293 DDX10Q13206 875 aaKnown RBP28.65■■■□□ 2.18
CHD1L-201ENST00000361293 PLEKHD1A6NEE1 506 aa28.64■■■□□ 2.17
CHD1L-201ENST00000361293 CDC42BPAQ5VT25 1732 aa28.63■■■□□ 2.17
CHD1L-201ENST00000361293 PTPRGP23470 1445 aa28.62■■■□□ 2.17
CHD1L-201ENST00000361293 ABCC10Q5T3U5 1492 aa28.62■■■□□ 2.17
CHD1L-201ENST00000361293 CROCC2H7BZ55 1655 aa28.59■■■□□ 2.17
CHD1L-201ENST00000361293 NCOA1Q15788 1441 aa28.58■■■□□ 2.17
CHD1L-201ENST00000361293 ADGBQ8N7X0 1667 aa28.58■■■□□ 2.17
CHD1L-201ENST00000361293 SHROOM2Q13796 1616 aa28.54■■■□□ 2.16
CHD1L-201ENST00000361293 KCNH8Q96L42 1107 aa28.53■■■□□ 2.16
CHD1L-201ENST00000361293 ADGRL2O95490 1459 aa28.53■■■□□ 2.16
CHD1L-201ENST00000361293 ANKRD30BQ9BXX2 1392 aa28.52■■■□□ 2.16
CHD1L-201ENST00000361293 ERCC6L2Q5T890 1561 aa28.5■■■□□ 2.15
CHD1L-201ENST00000361293 SLC4A1APQ9BWU0 796 aaKnown RBP28.5■■■□□ 2.15
CHD1L-201ENST00000361293 PZPP20742 1482 aa28.49■■■□□ 2.15
CHD1L-201ENST00000361293 L3MBTL2Q969R5 705 aa28.47■■■□□ 2.15
CHD1L-201ENST00000361293 RPRD2Q5VT52 1461 aaKnown RBP28.45■■■□□ 2.15
CHD1L-201ENST00000361293 ANKRD30AQ9BXX3 1397 aa28.44■■■□□ 2.14
CHD1L-201ENST00000361293 C9orf84Q5VXU9 1444 aa28.41■■■□□ 2.14
CHD1L-201ENST00000361293 TEX14Q8IWB6 1497 aa28.4■■■□□ 2.14
CHD1L-201ENST00000361293 SHANK2Q9UPX8 1470 aa28.4■■■□□ 2.14
CHD1L-201ENST00000361293 ANKRD50Q9ULJ7 1429 aa28.39■■■□□ 2.14
CHD1L-201ENST00000361293 CDC42BPBQ9Y5S2 1711 aa28.38■■■□□ 2.13
CHD1L-201ENST00000361293 HNRNPMP52272 730 aaKnown RBP eCLIP28.37■■■□□ 2.133e-7■■□□□ 12.7
CHD1L-201ENST00000361293 HSPA5P11021 654 aaKnown RBP28.36■■■□□ 2.13
CHD1L-201ENST00000361293 PREX2Q70Z35 1606 aa28.35■■■□□ 2.13
CHD1L-201ENST00000361293 SAMD9LQ8IVG5 1584 aa28.35■■■□□ 2.13
CHD1L-201ENST00000361293 MBD5Q9P267 1494 aa28.35■■■□□ 2.13
CHD1L-201ENST00000361293 ABCC2Q92887 1545 aa28.33■■■□□ 2.13
CHD1L-201ENST00000361293 NBPF8Q3BBV2 869 aa28.32■■■□□ 2.12
CHD1L-201ENST00000361293 ARHGEF5Q12774 1597 aa28.32■■■□□ 2.12
CHD1L-201ENST00000361293 TTC37Q6PGP7 1564 aa28.32■■■□□ 2.12
CHD1L-201ENST00000361293 KIAA1107Q9UPP5 1409 aa28.31■■■□□ 2.12
CHD1L-201ENST00000361293 TSPY4P0CV99 314 aa28.3■■■□□ 2.12
CHD1L-201ENST00000361293 TSPY10P0CW01 314 aa28.3■■■□□ 2.12
CHD1L-201ENST00000361293 CLASP1Q7Z460 1538 aa28.3■■■□□ 2.12
CHD1L-201ENST00000361293 PKD2Q13563 968 aa28.29■■■□□ 2.12
CHD1L-201ENST00000361293 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.28■■■□□ 2.12
CHD1L-201ENST00000361293 EIF4G2P78344 907 aaKnown RBP eCLIP28.27■■■□□ 2.12
CHD1L-201ENST00000361293 WASHC2AQ641Q2 1341 aa28.27■■■□□ 2.12
CHD1L-201ENST00000361293 ANP32CO43423 234 aa28.27■■■□□ 2.12
CHD1L-201ENST00000361293 KIF15Q9NS87 1388 aa28.26■■■□□ 2.11
CHD1L-201ENST00000361293 CCDC141Q6ZP82 1450 aa28.25■■■□□ 2.11
CHD1L-201ENST00000361293 NUP155O75694 1391 aa28.24■■■□□ 2.11
CHD1L-201ENST00000361293 SYCP2Q9BX26 1530 aa28.22■■■□□ 2.11
CHD1L-201ENST00000361293 ARHGAP5Q13017 1502 aa28.22■■■□□ 2.11
CHD1L-201ENST00000361293 CCER2I3L3R5 266 aa28.18■■■□□ 2.1
CHD1L-201ENST00000361293 KDM5DQ9BY66 1539 aa28.18■■■□□ 2.1
CHD1L-201ENST00000361293 ZCCHC11Q5TAX3 1644 aaKnown RBP28.16■■■□□ 2.1
CHD1L-201ENST00000361293 C11orf95C9JLR9 678 aaPredicted RBP28.16■■■□□ 2.1
CHD1L-201ENST00000361293 MYO5CQ9NQX4 1742 aa28.16■■■□□ 2.1
CHD1L-201ENST00000361293 SPATA31E1Q6ZUB1 1445 aa28.12■■■□□ 2.09
CHD1L-201ENST00000361293 RSPH4AQ5TD94 716 aa28.11■■■□□ 2.09
CHD1L-201ENST00000361293 UHRF1BP1LA0JNW5 1464 aa28.1■■■□□ 2.09
CHD1L-201ENST00000361293 MAST1Q9Y2H9 1570 aa28.08■■■□□ 2.09
CHD1L-201ENST00000361293 CCDC7Q96M83 1385 aa28.07■■■□□ 2.08
CHD1L-201ENST00000361293 ARHGEF12Q9NZN5 1544 aa28.07■■■□□ 2.08
CHD1L-201ENST00000361293 ZNF326Q5BKZ1 582 aaKnown RBP28.06■■■□□ 2.08
CHD1L-201ENST00000361293 FAM135AQ9P2D6 1515 aa28.05■■■□□ 2.08
CHD1L-201ENST00000361293 CNTLNQ9NXG0 1405 aa28.04■■■□□ 2.08
CHD1L-201ENST00000361293 PLCH2O75038 1416 aa28.02■■■□□ 2.08
CHD1L-201ENST00000361293 PLEKHH2Q8IVE3 1493 aa28.01■■■□□ 2.07
CHD1L-201ENST00000361293 PLXNC1O60486 1568 aa28■■■□□ 2.07
CHD1L-201ENST00000361293 KIF7Q2M1P5 1343 aa27.99■■■□□ 2.07
CHD1L-201ENST00000361293 POLR1AO95602 1720 aaPredicted RBP27.99■■■□□ 2.07
CHD1L-201ENST00000361293 UNC13BO14795 1591 aa27.97■■■□□ 2.07
CHD1L-201ENST00000361293 SUPT16HQ9Y5B9 1047 aaKnown RBP27.97■■■□□ 2.07
CHD1L-201ENST00000361293 UHRF1BP1Q6BDS2 1440 aa27.96■■■□□ 2.07
CHD1L-201ENST00000361293 USP47Q96K76 1375 aa27.95■■■□□ 2.06
CHD1L-201ENST00000361293 ABCC1P33527 1531 aa27.94■■■□□ 2.06
CHD1L-201ENST00000361293 EFCAB2Q5VUJ9 269 aa27.93■■■□□ 2.06
CHD1L-201ENST00000361293 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.93■■■□□ 2.061e-8■■□□□ 13.5
CHD1L-201ENST00000361293 KDM5CP41229 1560 aa27.92■■■□□ 2.06
CHD1L-201ENST00000361293 BCORL1Q5H9F3 1711 aa27.92■■■□□ 2.06
CHD1L-201ENST00000361293 TRAPPC8Q9Y2L5 1435 aa27.91■■■□□ 2.06
CHD1L-201ENST00000361293 RALGAPBQ86X10 1494 aa27.9■■■□□ 2.06
CHD1L-201ENST00000361293 KDM2AQ9Y2K7 1162 aa27.9■■■□□ 2.06
CHD1L-201ENST00000361293 DUOX2Q9NRD8 1548 aa27.89■■■□□ 2.06
CHD1L-201ENST00000361293 PLA2R1Q13018 1463 aa27.88■■■□□ 2.05
CHD1L-201ENST00000361293 DCAF11Q8TEB1 546 aa27.87■■■□□ 2.05
CHD1L-201ENST00000361293 IQGAP3Q86VI3 1631 aa27.87■■■□□ 2.05
CHD1L-201ENST00000361293 CCDC184Q52MB2 194 aa27.86■■■□□ 2.05
CHD1L-201ENST00000361293 PRKRIP1Q9H875 184 aaPredicted RBP27.85■■■□□ 2.05
CHD1L-201ENST00000361293 CCDC144AA2RUR9 1427 aa27.84■■■□□ 2.05
CHD1L-201ENST00000361293 WDR7Q9Y4E6 1490 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms