RNA–Protein interactions for RNA: ENST00000360916.9

PACRGL-202, Transcript of parkin coregulated like, humanhuman

TSL 1 (best) BASIC

Gene PACRGL, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-202ENST00000360916 CAMSAP2Q08AD1 1489 aa24.8■■□□□ 1.56
PACRGL-202ENST00000360916 ABCC10Q5T3U5 1492 aa24.78■■□□□ 1.56
PACRGL-202ENST00000360916 SIN3AQ96ST3 1273 aa24.77■■□□□ 1.56
PACRGL-202ENST00000360916 KDM6BO15054 1643 aa24.75■■□□□ 1.55
PACRGL-202ENST00000360916 ROCK1Q13464 1354 aa24.75■■□□□ 1.55
PACRGL-202ENST00000360916 NEUROD1Q13562 356 aa24.74■■□□□ 1.55
PACRGL-202ENST00000360916 CDC42BPAQ5VT25 1732 aa24.74■■□□□ 1.55
PACRGL-202ENST00000360916 ABCC2Q92887 1545 aa24.74■■□□□ 1.55
PACRGL-202ENST00000360916 ZNF777Q9ULD5 760 aaPredicted RBP24.74■■□□□ 1.55
PACRGL-202ENST00000360916 TRIM52Q96A61 297 aa24.65■■□□□ 1.54
PACRGL-202ENST00000360916 CROCC2H7BZ55 1655 aa24.64■■□□□ 1.54
PACRGL-202ENST00000360916 TIMELESSQ9UNS1 1208 aa24.63■■□□□ 1.53
PACRGL-202ENST00000360916 ADGBQ8N7X0 1667 aa24.62■■□□□ 1.53
PACRGL-202ENST00000360916 DENND4BO75064 1496 aaPredicted RBP24.61■■□□□ 1.53
PACRGL-202ENST00000360916 NCOA1Q15788 1441 aa24.6■■□□□ 1.53
PACRGL-202ENST00000360916 UHRF1BP1LA0JNW5 1464 aa24.6■■□□□ 1.53
PACRGL-202ENST00000360916 PREX2Q70Z35 1606 aa24.59■■□□□ 1.53
PACRGL-202ENST00000360916 ADGRL2O95490 1459 aa24.59■■□□□ 1.53
PACRGL-202ENST00000360916 ZCCHC11Q5TAX3 1644 aaKnown RBP24.58■■□□□ 1.53
PACRGL-202ENST00000360916 TTC37Q6PGP7 1564 aa24.57■■□□□ 1.52
PACRGL-202ENST00000360916 CDC42BPBQ9Y5S2 1711 aa24.57■■□□□ 1.52
PACRGL-202ENST00000360916 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.56■■□□□ 1.52
PACRGL-202ENST00000360916 KDM5BQ9UGL1 1544 aa24.56■■□□□ 1.52
PACRGL-202ENST00000360916 MPHOSPH9Q99550 1183 aa24.55■■□□□ 1.52
PACRGL-202ENST00000360916 TONSLQ96HA7 1378 aa24.54■■□□□ 1.52
PACRGL-202ENST00000360916 SHANK2Q9UPX8 1470 aa24.54■■□□□ 1.52
PACRGL-202ENST00000360916 ANKRD30AQ9BXX3 1397 aa24.53■■□□□ 1.52
PACRGL-202ENST00000360916 SAMD9LQ8IVG5 1584 aa24.53■■□□□ 1.52
PACRGL-202ENST00000360916 ACIN1Q9UKV3 1341 aaKnown RBP24.53■■□□□ 1.52
PACRGL-202ENST00000360916 C9orf84Q5VXU9 1444 aa24.52■■□□□ 1.52
PACRGL-202ENST00000360916 PPP1R15AO75807 674 aaPredicted RBP24.5■■□□□ 1.51
PACRGL-202ENST00000360916 HNRNPMP52272 730 aaKnown RBP eCLIP24.5■■□□□ 1.51
PACRGL-202ENST00000360916 ARHGEF5Q12774 1597 aa24.5■■□□□ 1.51
PACRGL-202ENST00000360916 MBD5Q9P267 1494 aa24.5■■□□□ 1.51
PACRGL-202ENST00000360916 KCNH8Q96L42 1107 aa24.5■■□□□ 1.51
PACRGL-202ENST00000360916 ARHGAP5Q13017 1502 aa24.49■■□□□ 1.51
PACRGL-202ENST00000360916 TSPY4P0CV99 314 aa24.47■■□□□ 1.51
PACRGL-202ENST00000360916 TSPY10P0CW01 314 aa24.47■■□□□ 1.51
PACRGL-202ENST00000360916 MYO5CQ9NQX4 1742 aa24.47■■□□□ 1.51
PACRGL-202ENST00000360916 FOXD1Q16676 465 aa24.46■■□□□ 1.51
PACRGL-202ENST00000360916 CCDC141Q6ZP82 1450 aa24.45■■□□□ 1.5
PACRGL-202ENST00000360916 ANKRD50Q9ULJ7 1429 aa24.44■■□□□ 1.5
PACRGL-202ENST00000360916 SYCP2Q9BX26 1530 aa24.43■■□□□ 1.5
PACRGL-202ENST00000360916 SLC4A1APQ9BWU0 796 aaKnown RBP24.42■■□□□ 1.5
PACRGL-202ENST00000360916 PZPP20742 1482 aa24.42■■□□□ 1.5
PACRGL-202ENST00000360916 RSPH4AQ5TD94 716 aa24.39■■□□□ 1.49
PACRGL-202ENST00000360916 MIER1Q8N108 512 aa24.39■■□□□ 1.49
PACRGL-202ENST00000360916 ANKRD30BQ9BXX2 1392 aa24.39■■□□□ 1.49
PACRGL-202ENST00000360916 KIF15Q9NS87 1388 aa24.39■■□□□ 1.49
PACRGL-202ENST00000360916 PLCH2O75038 1416 aa24.38■■□□□ 1.49
PACRGL-202ENST00000360916 PLEKHH2Q8IVE3 1493 aa24.35■■□□□ 1.49
PACRGL-202ENST00000360916 KIAA1107Q9UPP5 1409 aa24.35■■□□□ 1.49
PACRGL-202ENST00000360916 WDR7Q9Y4E6 1490 aa24.34■■□□□ 1.49
PACRGL-202ENST00000360916 MAST1Q9Y2H9 1570 aa24.31■■□□□ 1.48
PACRGL-202ENST00000360916 RPRD2Q5VT52 1461 aaKnown RBP24.31■■□□□ 1.48
PACRGL-202ENST00000360916 ARHGEF12Q9NZN5 1544 aa24.31■■□□□ 1.48
PACRGL-202ENST00000360916 RIMBP3CA6NJZ7 1639 aa24.31■■□□□ 1.48
PACRGL-202ENST00000360916 RIMBP3BA6NNM3 1639 aa24.31■■□□□ 1.48
PACRGL-202ENST00000360916 RIMBP3Q9UFD9 1639 aa24.31■■□□□ 1.48
PACRGL-202ENST00000360916 EFCAB2Q5VUJ9 269 aa24.3■■□□□ 1.48
PACRGL-202ENST00000360916 NUP155O75694 1391 aa24.28■■□□□ 1.48
PACRGL-202ENST00000360916 CYB5RLQ6IPT4 315 aa24.28■■□□□ 1.48
PACRGL-202ENST00000360916 ABCC1P33527 1531 aa24.27■■□□□ 1.48
PACRGL-202ENST00000360916 PKD2Q13563 968 aa24.26■■□□□ 1.47
PACRGL-202ENST00000360916 KDM5DQ9BY66 1539 aa24.26■■□□□ 1.47
PACRGL-202ENST00000360916 L3MBTL2Q969R5 705 aa24.25■■□□□ 1.47
PACRGL-202ENST00000360916 ARAP3Q8WWN8 1544 aa24.25■■□□□ 1.47
PACRGL-202ENST00000360916 HIRIP3Q9BW71 556 aaPredicted RBP24.24■■□□□ 1.47
PACRGL-202ENST00000360916 ASXL2Q76L83 1435 aa24.24■■□□□ 1.47
PACRGL-202ENST00000360916 PLXNC1O60486 1568 aa24.23■■□□□ 1.47
PACRGL-202ENST00000360916 TEX14Q8IWB6 1497 aa24.23■■□□□ 1.47
PACRGL-202ENST00000360916 ABCA9Q8IUA7 1624 aa24.21■■□□□ 1.47
PACRGL-202ENST00000360916 TRAPPC8Q9Y2L5 1435 aa24.2■■□□□ 1.46
PACRGL-202ENST00000360916 NPM1P06748 294 aaKnown RBP eCLIP24.15■■□□□ 1.46
PACRGL-202ENST00000360916 FANCAO15360 1455 aa24.15■■□□□ 1.46
PACRGL-202ENST00000360916 FAM135AQ9P2D6 1515 aa24.15■■□□□ 1.46
PACRGL-202ENST00000360916 DUOX2Q9NRD8 1548 aa24.15■■□□□ 1.46
PACRGL-202ENST00000360916 UNC13BO14795 1591 aa24.13■■□□□ 1.45
PACRGL-202ENST00000360916 DDX10Q13206 875 aaKnown RBP24.11■■□□□ 1.45
PACRGL-202ENST00000360916 AFAP1Q8N556 730 aa24.11■■□□□ 1.45
PACRGL-202ENST00000360916 ERBINQ96RT1 1412 aa24.1■■□□□ 1.45
PACRGL-202ENST00000360916 NBPF8Q3BBV2 869 aa24.09■■□□□ 1.45
PACRGL-202ENST00000360916 YTHDC1Q96MU7 727 aaKnown RBP24.09■■□□□ 1.45
PACRGL-202ENST00000360916 SPAG9O60271 1321 aaKnown RBP24.09■■□□□ 1.45
PACRGL-202ENST00000360916 ZFYVE16Q7Z3T8 1539 aa24.08■■□□□ 1.45
PACRGL-202ENST00000360916 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.07■■□□□ 1.44
PACRGL-202ENST00000360916 CENPBP07199 599 aaPredicted RBP24.06■■□□□ 1.44
PACRGL-202ENST00000360916 ADGRL1O94910 1474 aa24.06■■□□□ 1.44
PACRGL-202ENST00000360916 RTEL1-TNFRSF6BF6WH68 1400 aa24.06■■□□□ 1.44
PACRGL-202ENST00000360916 HSPA5P11021 654 aaKnown RBP24.04■■□□□ 1.44
PACRGL-202ENST00000360916 IQGAP3Q86VI3 1631 aa24.04■■□□□ 1.44
PACRGL-202ENST00000360916 MAGI2Q86UL8 1455 aa24.03■■□□□ 1.44
PACRGL-202ENST00000360916 SCAPERQ9BY12 1400 aa24.03■■□□□ 1.44
PACRGL-202ENST00000360916 EIF4G2P78344 907 aaKnown RBP eCLIP24.02■■□□□ 1.44
PACRGL-202ENST00000360916 DNAJC5Q9H3Z4 198 aa24.01■■□□□ 1.43
PACRGL-202ENST00000360916 INO80Q9ULG1 1556 aaPredicted RBP24.01■■□□□ 1.43
PACRGL-202ENST00000360916 ATP7AQ04656 1500 aa24■■□□□ 1.43
PACRGL-202ENST00000360916 CD109Q6YHK3 1445 aa23.97■■□□□ 1.43
PACRGL-202ENST00000360916 ZNF326Q5BKZ1 582 aaKnown RBP23.95■■□□□ 1.42
PACRGL-202ENST00000360916 PLA2R1Q13018 1463 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms