RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 RALBP1Q15311 655 aa6.3□□□□□ -1.4
SCN3A-202ENST00000360093 KIF21BO75037 1637 aa6.29□□□□□ -1.4
SCN3A-202ENST00000360093 PRDM2Q13029 1718 aa6.29□□□□□ -1.4
SCN3A-202ENST00000360093 ERICH3Q5RHP9 1530 aa6.29□□□□□ -1.4
SCN3A-202ENST00000360093 MORC1Q86VD1 984 aa6.29□□□□□ -1.4
SCN3A-202ENST00000360093 OSCARQ8IYS5 282 aa6.29□□□□□ -1.4
SCN3A-202ENST00000360093 MLECQ14165 292 aa6.29□□□□□ -1.4
SCN3A-202ENST00000360093 EID1Q9Y6B2 187 aa6.28□□□□□ -1.4
SCN3A-202ENST00000360093 KIF3BO15066 747 aa6.28□□□□□ -1.4
SCN3A-202ENST00000360093 CC2D1BQ5T0F9 858 aaKnown RBP6.28□□□□□ -1.4
SCN3A-202ENST00000360093 CFTRP13569 1480 aa6.28□□□□□ -1.4
SCN3A-202ENST00000360093 GOLGA6L22H0YM25 854 aa6.28□□□□□ -1.4
SCN3A-202ENST00000360093 U2SURPO15042 1029 aaKnown RBP6.28□□□□□ -1.4
SCN3A-202ENST00000360093 LMOD2Q6P5Q4 547 aa6.28□□□□□ -1.4
SCN3A-202ENST00000360093 WASHC2CQ9Y4E1 1318 aa6.28□□□□□ -1.4
SCN3A-202ENST00000360093 NCLP19338 710 aaKnown RBP6.28□□□□□ -1.4
SCN3A-202ENST00000360093 HNRNPMP52272 730 aaKnown RBP eCLIP6.27□□□□□ -1.41
SCN3A-202ENST00000360093 SENP3Q9H4L4 574 aaPredicted RBP6.27□□□□□ -1.41
SCN3A-202ENST00000360093 GRIN2BQ13224 1484 aa6.27□□□□□ -1.41
SCN3A-202ENST00000360093 IGF1RP08069 1367 aa6.27□□□□□ -1.41
SCN3A-202ENST00000360093 PPP4R2Q9NY27 417 aa6.27□□□□□ -1.41
SCN3A-202ENST00000360093 HSPA5P11021 654 aaKnown RBP6.27□□□□□ -1.41
SCN3A-202ENST00000360093 CC2D2AQ9P2K1 1620 aa6.27□□□□□ -1.41
SCN3A-202ENST00000360093 TERF2IPQ9NYB0 399 aa6.26□□□□□ -1.41
SCN3A-202ENST00000360093 LAS1LQ9Y4W2 734 aaKnown RBP6.26□□□□□ -1.41
SCN3A-202ENST00000360093 STAC3Q96MF2 364 aa6.26□□□□□ -1.41
SCN3A-202ENST00000360093 RTF1Q92541 710 aaKnown RBP6.26□□□□□ -1.41
SCN3A-202ENST00000360093 CCDC144AA2RUR9 1427 aa6.26□□□□□ -1.41
SCN3A-202ENST00000360093 MYOM3Q5VTT5 1437 aa6.26□□□□□ -1.41
SCN3A-202ENST00000360093 ERICH6BQ5W0A0 696 aa6.26□□□□□ -1.41
SCN3A-202ENST00000360093 SUPT16HQ9Y5B9 1047 aaKnown RBP6.26□□□□□ -1.41
SCN3A-202ENST00000360093 MRC2Q9UBG0 1479 aa6.25□□□□□ -1.41
SCN3A-202ENST00000360093 EFCAB5A4FU69 1503 aa6.25□□□□□ -1.41
SCN3A-202ENST00000360093 IPO8O15397 1037 aaKnown RBP6.25□□□□□ -1.41
SCN3A-202ENST00000360093 NEUROD2Q15784 382 aa6.25□□□□□ -1.41
SCN3A-202ENST00000360093 PLEKHG5O94827 1062 aa6.25□□□□□ -1.41
SCN3A-202ENST00000360093 TOP2BQ02880 1626 aa6.25□□□□□ -1.41
SCN3A-202ENST00000360093 PHLDB1Q86UU1 1377 aa6.25□□□□□ -1.41
SCN3A-202ENST00000360093 IFT140Q96RY7 1462 aa6.25□□□□□ -1.41
SCN3A-202ENST00000360093 TNNT2P45379 298 aaPredicted RBP6.24□□□□□ -1.41
SCN3A-202ENST00000360093 RUSC2Q8N2Y8 1516 aa6.24□□□□□ -1.41
SCN3A-202ENST00000360093 IRX6P78412 446 aaPredicted RBP6.24□□□□□ -1.41
SCN3A-202ENST00000360093 RAD54L2Q9Y4B4 1467 aa6.23□□□□□ -1.41
SCN3A-202ENST00000360093 ARXQ96QS3 562 aa6.23□□□□□ -1.41
SCN3A-202ENST00000360093 STK26Q9P289 416 aa6.23□□□□□ -1.41
SCN3A-202ENST00000360093 VGFO15240 615 aaPredicted RBP6.23□□□□□ -1.41
SCN3A-202ENST00000360093 HDAC5Q9UQL6 1122 aa6.23□□□□□ -1.41
SCN3A-202ENST00000360093 CASKIN1Q8WXD9 1431 aa6.23□□□□□ -1.41
SCN3A-202ENST00000360093 FYCO1Q9BQS8 1478 aa6.23□□□□□ -1.41
SCN3A-202ENST00000360093 FRAT1Q92837 279 aaPredicted RBP6.23□□□□□ -1.41
SCN3A-202ENST00000360093 LAMC3Q9Y6N6 1575 aa6.22□□□□□ -1.41
SCN3A-202ENST00000360093 DNMBPQ6XZF7 1577 aa6.22□□□□□ -1.41
SCN3A-202ENST00000360093 NPHP1O15259 732 aa6.22□□□□□ -1.41
SCN3A-202ENST00000360093 FOXD1Q16676 465 aa6.22□□□□□ -1.41
SCN3A-202ENST00000360093 CDK11BP21127 795 aaKnown RBP6.22□□□□□ -1.41
SCN3A-202ENST00000360093 OS9Q13438 667 aaPredicted RBP6.22□□□□□ -1.41
SCN3A-202ENST00000360093 L3MBTL2Q969R5 705 aa6.22□□□□□ -1.41
SCN3A-202ENST00000360093 SYNJ2O15056 1496 aa6.22□□□□□ -1.41
SCN3A-202ENST00000360093 LMOD3Q0VAK6 560 aa6.22□□□□□ -1.41
SCN3A-202ENST00000360093 ZRSR1Q15695 479 aaKnown RBP6.21□□□□□ -1.41
SCN3A-202ENST00000360093 KIF15Q9NS87 1388 aa6.21□□□□□ -1.42
SCN3A-202ENST00000360093 LRRC9Q6ZRR7 1453 aa6.21□□□□□ -1.42
SCN3A-202ENST00000360093 SAFB2Q14151 953 aaKnown RBP eCLIP6.21□□□□□ -1.42
SCN3A-202ENST00000360093 GOLGA2Q08379 1002 aa6.2□□□□□ -1.42
SCN3A-202ENST00000360093 NLRP13Q86W25 1043 aa6.2□□□□□ -1.42
SCN3A-202ENST00000360093 MCCP23508 829 aa6.2□□□□□ -1.42
SCN3A-202ENST00000360093 PDE3BQ13370 1112 aa6.2□□□□□ -1.42
SCN3A-202ENST00000360093 FGD6Q6ZV73 1430 aa6.2□□□□□ -1.42
SCN3A-202ENST00000360093 SYNJ1O43426 1573 aa6.2□□□□□ -1.42
SCN3A-202ENST00000360093 CUL7Q14999 1698 aa6.2□□□□□ -1.42
SCN3A-202ENST00000360093 HECW1Q76N89 1606 aa6.2□□□□□ -1.42
SCN3A-202ENST00000360093 TOPBP1Q92547 1522 aa6.2□□□□□ -1.42
SCN3A-202ENST00000360093 PLEKHH2Q8IVE3 1493 aa6.2□□□□□ -1.42
SCN3A-202ENST00000360093 PAK3O75914 559 aaPredicted RBP6.19□□□□□ -1.42
SCN3A-202ENST00000360093 U2AF1L5P0DN76 240 aaPredicted RBP6.19□□□□□ -1.42
SCN3A-202ENST00000360093 U2AF1Q01081 240 aaKnown RBP eCLIP6.19□□□□□ -1.42
SCN3A-202ENST00000360093 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.19□□□□□ -1.42
SCN3A-202ENST00000360093 EVC2Q86UK5 1308 aa6.19□□□□□ -1.42
SCN3A-202ENST00000360093 AQRO60306 1485 aaKnown RBP eCLIP6.19□□□□□ -1.42
SCN3A-202ENST00000360093 EHBP1L1Q8N3D4 1523 aa6.19□□□□□ -1.42
SCN3A-202ENST00000360093 NGEFQ8N5V2 710 aa6.18□□□□□ -1.42
SCN3A-202ENST00000360093 DHX57Q6P158 1386 aaKnown RBP6.18□□□□□ -1.42
SCN3A-202ENST00000360093 SUPT6HQ7KZ85 1726 aaKnown RBP6.18□□□□□ -1.42
SCN3A-202ENST00000360093 NGDNQ8NEJ9 315 aaKnown RBP6.18□□□□□ -1.42
SCN3A-202ENST00000360093 TRIM44Q96DX7 344 aaPredicted RBP6.18□□□□□ -1.42
SCN3A-202ENST00000360093 CYB5RLQ6IPT4 315 aa6.18□□□□□ -1.42
SCN3A-202ENST00000360093 NBR1Q14596 966 aa6.17□□□□□ -1.42
SCN3A-202ENST00000360093 ARHGAP5Q13017 1502 aa6.17□□□□□ -1.42
SCN3A-202ENST00000360093 KCNJ4P48050 445 aa6.17□□□□□ -1.42
SCN3A-202ENST00000360093 RCAN3Q9UKA8 241 aa6.17□□□□□ -1.42
SCN3A-202ENST00000360093 PMFBP1Q8TBY8 1022 aa6.17□□□□□ -1.42
SCN3A-202ENST00000360093 RWDD1Q9H446 243 aaPredicted RBP6.17□□□□□ -1.42
SCN3A-202ENST00000360093 CGNL1Q0VF96 1302 aa6.17□□□□□ -1.42
SCN3A-202ENST00000360093 CSB-PGBD3P0DP91 1061 aa6.17□□□□□ -1.42
SCN3A-202ENST00000360093 MYBBP1AQ9BQG0 1328 aaKnown RBP6.17□□□□□ -1.42
SCN3A-202ENST00000360093 NCOA2Q15596 1464 aa6.17□□□□□ -1.42
SCN3A-202ENST00000360093 SOX12O15370 315 aa6.17□□□□□ -1.42
SCN3A-202ENST00000360093 FGD1P98174 961 aa6.17□□□□□ -1.42
SCN3A-202ENST00000360093 STK31Q9BXU1 1019 aa6.17□□□□□ -1.42
SCN3A-202ENST00000360093 UNC13AQ9UPW8 1703 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms