RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 DAPK1P53355 1430 aa13.06□□□□□ -0.32
GTF3C2-202ENST00000359541 PRKCSHP14314 528 aaPredicted RBP13.06□□□□□ -0.32
GTF3C2-202ENST00000359541 PLEKHD1A6NEE1 506 aa13.05□□□□□ -0.32
GTF3C2-202ENST00000359541 CCER2I3L3R5 266 aa13.05□□□□□ -0.32
GTF3C2-202ENST00000359541 ZNF777Q9ULD5 760 aaPredicted RBP13.03□□□□□ -0.32
GTF3C2-202ENST00000359541 HIRIP3Q9BW71 556 aaPredicted RBP13.03□□□□□ -0.32
GTF3C2-202ENST00000359541 SLC4A1APQ9BWU0 796 aaKnown RBP13.03□□□□□ -0.32
GTF3C2-202ENST00000359541 EIF4G2P78344 907 aaKnown RBP eCLIP13.02□□□□□ -0.32
GTF3C2-202ENST00000359541 NUP160Q12769 1436 aa13.02□□□□□ -0.33
GTF3C2-202ENST00000359541 ITSN2Q9NZM3 1697 aa13.01□□□□□ -0.33
GTF3C2-202ENST00000359541 DNMT1P26358 1616 aaKnown RBP13.01□□□□□ -0.33
GTF3C2-202ENST00000359541 ABCC5O15440 1437 aa13.01□□□□□ -0.33
GTF3C2-202ENST00000359541 CEP170Q5SW79 1584 aa13.01□□□□□ -0.33
GTF3C2-202ENST00000359541 PRG4Q92954 1404 aaPredicted RBP13□□□□□ -0.33
GTF3C2-202ENST00000359541 ANKRD30AQ9BXX3 1397 aa12.99□□□□□ -0.33
GTF3C2-202ENST00000359541 PLB1Q6P1J6 1458 aa12.99□□□□□ -0.33
GTF3C2-202ENST00000359541 NEFLP07196 543 aa12.98□□□□□ -0.33
GTF3C2-202ENST00000359541 CAMSAP2Q08AD1 1489 aa12.98□□□□□ -0.33
GTF3C2-202ENST00000359541 ZNF644Q9H582 1327 aaPredicted RBP12.97□□□□□ -0.33
GTF3C2-202ENST00000359541 TSPY4P0CV99 314 aa12.97□□□□□ -0.33
GTF3C2-202ENST00000359541 TSPY10P0CW01 314 aa12.97□□□□□ -0.33
GTF3C2-202ENST00000359541 L3MBTL2Q969R5 705 aa12.95□□□□□ -0.34
GTF3C2-202ENST00000359541 HSPA5P11021 654 aaKnown RBP12.95□□□□□ -0.34
GTF3C2-202ENST00000359541 GPATCH8Q9UKJ3 1502 aaKnown RBP12.95□□□□□ -0.34
GTF3C2-202ENST00000359541 KIF14Q15058 1648 aa12.94□□□□□ -0.34
GTF3C2-202ENST00000359541 PTPRGP23470 1445 aa12.93□□□□□ -0.34
GTF3C2-202ENST00000359541 ANKRD30BQ9BXX2 1392 aa12.93□□□□□ -0.34
GTF3C2-202ENST00000359541 ADCY10Q96PN6 1610 aa12.93□□□□□ -0.34
GTF3C2-202ENST00000359541 RPRD2Q5VT52 1461 aaKnown RBP12.93□□□□□ -0.34
GTF3C2-202ENST00000359541 NCOA1Q15788 1441 aa12.92□□□□□ -0.34
GTF3C2-202ENST00000359541 FOXD1Q16676 465 aa12.92□□□□□ -0.34
GTF3C2-202ENST00000359541 SUPT16HQ9Y5B9 1047 aaKnown RBP12.91□□□□□ -0.34
GTF3C2-202ENST00000359541 KDM6BO15054 1643 aa12.91□□□□□ -0.34
GTF3C2-202ENST00000359541 CNGB1Q14028 1251 aaPredicted RBP12.91□□□□□ -0.34
GTF3C2-202ENST00000359541 ADGRL2O95490 1459 aa12.91□□□□□ -0.34
GTF3C2-202ENST00000359541 KCNH8Q96L42 1107 aa12.9□□□□□ -0.34
GTF3C2-202ENST00000359541 ADGBQ8N7X0 1667 aa12.9□□□□□ -0.34
GTF3C2-202ENST00000359541 ABCA8O94911 1581 aa12.89□□□□□ -0.35
GTF3C2-202ENST00000359541 ANKRD50Q9ULJ7 1429 aa12.89□□□□□ -0.35
GTF3C2-202ENST00000359541 RSPH4AQ5TD94 716 aa12.89□□□□□ -0.35
GTF3C2-202ENST00000359541 BCL11AQ9H165 835 aa12.89□□□□□ -0.35
GTF3C2-202ENST00000359541 KIAA1107Q9UPP5 1409 aa12.88□□□□□ -0.35
GTF3C2-202ENST00000359541 ATP10BO94823 1461 aa12.88□□□□□ -0.35
GTF3C2-202ENST00000359541 SHANK2Q9UPX8 1470 aa12.88□□□□□ -0.35
GTF3C2-202ENST00000359541 DENND4BO75064 1496 aaPredicted RBP12.88□□□□□ -0.35
GTF3C2-202ENST00000359541 PKD2Q13563 968 aa12.87□□□□□ -0.35
GTF3C2-202ENST00000359541 C9orf84Q5VXU9 1444 aa12.87□□□□□ -0.35
GTF3C2-202ENST00000359541 KDM5BQ9UGL1 1544 aa12.87□□□□□ -0.35
GTF3C2-202ENST00000359541 MYT1LQ9UL68 1186 aa12.86□□□□□ -0.35
GTF3C2-202ENST00000359541 NUP155O75694 1391 aa12.85□□□□□ -0.35
GTF3C2-202ENST00000359541 WASHC2AQ641Q2 1341 aa12.85□□□□□ -0.35
GTF3C2-202ENST00000359541 CNTLNQ9NXG0 1405 aa12.85□□□□□ -0.35
GTF3C2-202ENST00000359541 ZNF326Q5BKZ1 582 aaKnown RBP12.84□□□□□ -0.35
GTF3C2-202ENST00000359541 PZPP20742 1482 aa12.83□□□□□ -0.36
GTF3C2-202ENST00000359541 ABCC10Q5T3U5 1492 aa12.83□□□□□ -0.36
GTF3C2-202ENST00000359541 TEX14Q8IWB6 1497 aa12.83□□□□□ -0.36
GTF3C2-202ENST00000359541 CCDC7Q96M83 1385 aa12.83□□□□□ -0.36
GTF3C2-202ENST00000359541 CROCC2H7BZ55 1655 aa12.83□□□□□ -0.36
GTF3C2-202ENST00000359541 KIF15Q9NS87 1388 aa12.82□□□□□ -0.36
GTF3C2-202ENST00000359541 HNRNPUQ00839 825 aaKnown RBP eCLIP12.82□□□□□ -0.36
GTF3C2-202ENST00000359541 DAXXQ9UER7 740 aaPredicted RBP12.81□□□□□ -0.36
GTF3C2-202ENST00000359541 FKBP8Q14318 412 aa12.81□□□□□ -0.36
GTF3C2-202ENST00000359541 HNRNPMP52272 730 aaKnown RBP eCLIP12.8□□□□□ -0.361e-13■■■□□ 16
GTF3C2-202ENST00000359541 CCDC141Q6ZP82 1450 aa12.8□□□□□ -0.36
GTF3C2-202ENST00000359541 NBPF8Q3BBV2 869 aa12.8□□□□□ -0.36
GTF3C2-202ENST00000359541 ARHGEF5Q12774 1597 aa12.79□□□□□ -0.36
GTF3C2-202ENST00000359541 CDC42BPAQ5VT25 1732 aa12.79□□□□□ -0.36
GTF3C2-202ENST00000359541 PLEKHH2Q8IVE3 1493 aa12.78□□□□□ -0.36
GTF3C2-202ENST00000359541 POLR3GLQ9BT43 218 aa12.78□□□□□ -0.36
GTF3C2-202ENST00000359541 ARID4BQ4LE39 1312 aaPredicted RBP12.78□□□□□ -0.36
GTF3C2-202ENST00000359541 MRS2Q9HD23 443 aa12.77□□□□□ -0.37
GTF3C2-202ENST00000359541 USP47Q96K76 1375 aa12.76□□□□□ -0.37
GTF3C2-202ENST00000359541 ARHGAP5Q13017 1502 aa12.76□□□□□ -0.37
GTF3C2-202ENST00000359541 ERICH6Q7L0X2 663 aa12.76□□□□□ -0.37
GTF3C2-202ENST00000359541 ROCK2O75116 1388 aaKnown RBP12.75□□□□□ -0.37
GTF3C2-202ENST00000359541 PRKRIP1Q9H875 184 aaPredicted RBP12.75□□□□□ -0.37
GTF3C2-202ENST00000359541 KIF7Q2M1P5 1343 aa12.75□□□□□ -0.37
GTF3C2-202ENST00000359541 CARD11Q9BXL7 1154 aa12.75□□□□□ -0.37
GTF3C2-202ENST00000359541 BCANQ96GW7 911 aa12.74□□□□□ -0.37
GTF3C2-202ENST00000359541 KDM5DQ9BY66 1539 aa12.74□□□□□ -0.37
GTF3C2-202ENST00000359541 ARHGEF12Q9NZN5 1544 aa12.74□□□□□ -0.37
GTF3C2-202ENST00000359541 PREX2Q70Z35 1606 aa12.73□□□□□ -0.37
GTF3C2-202ENST00000359541 CHD1O14646 1710 aa12.73□□□□□ -0.37
GTF3C2-202ENST00000359541 ABCC2Q92887 1545 aa12.72□□□□□ -0.37
GTF3C2-202ENST00000359541 EFCAB2Q5VUJ9 269 aa12.72□□□□□ -0.37
GTF3C2-202ENST00000359541 MBD5Q9P267 1494 aa12.72□□□□□ -0.37
GTF3C2-202ENST00000359541 SPATA31E1Q6ZUB1 1445 aa12.72□□□□□ -0.37
GTF3C2-202ENST00000359541 KDM2AQ9Y2K7 1162 aa12.71□□□□□ -0.37
GTF3C2-202ENST00000359541 CCDC144AA2RUR9 1427 aa12.71□□□□□ -0.37
GTF3C2-202ENST00000359541 FAM9BQ8IZU0 186 aa12.71□□□□□ -0.37
GTF3C2-202ENST00000359541 UHRF1BP1Q6BDS2 1440 aa12.71□□□□□ -0.38
GTF3C2-202ENST00000359541 DCAF11Q8TEB1 546 aa12.71□□□□□ -0.38
GTF3C2-202ENST00000359541 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.7□□□□□ -0.383e-7■■□□□ 12.3
GTF3C2-202ENST00000359541 RALGAPBQ86X10 1494 aa12.7□□□□□ -0.38
GTF3C2-202ENST00000359541 SAMD9LQ8IVG5 1584 aa12.69□□□□□ -0.38
GTF3C2-202ENST00000359541 SHROOM2Q13796 1616 aa12.69□□□□□ -0.38
GTF3C2-202ENST00000359541 C11orf95C9JLR9 678 aaPredicted RBP12.69□□□□□ -0.38
GTF3C2-202ENST00000359541 SYCP2Q9BX26 1530 aa12.68□□□□□ -0.38
GTF3C2-202ENST00000359541 FAM135AQ9P2D6 1515 aa12.67□□□□□ -0.38
GTF3C2-202ENST00000359541 MAST1Q9Y2H9 1570 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms