RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 NBPF8Q3BBV2 869 aa14.98□□□□□ -0.01
RPE-202ENST00000359429 ERICH6Q7L0X2 663 aa14.96□□□□□ -0.01
RPE-202ENST00000359429 TCOF1Q13428 1488 aaKnown RBP14.96□□□□□ -0.01
RPE-202ENST00000359429 PDS5BQ9NTI5 1447 aa14.96□□□□□ -0.02
RPE-202ENST00000359429 HECW1Q76N89 1606 aa14.95□□□□□ -0.02
RPE-202ENST00000359429 ZBED9Q6R2W3 1325 aa14.95□□□□□ -0.02
RPE-202ENST00000359429 URB2Q14146 1524 aaKnown RBP14.95□□□□□ -0.02
RPE-202ENST00000359429 THOC2Q8NI27 1593 aaKnown RBP14.95□□□□□ -0.02
RPE-202ENST00000359429 GCC2Q8IWJ2 1684 aa14.93□□□□□ -0.02
RPE-202ENST00000359429 GAPVD1Q14C86 1478 aa14.93□□□□□ -0.02
RPE-202ENST00000359429 ARID3CA6NKF2 412 aa14.93□□□□□ -0.02
RPE-202ENST00000359429 KIF7Q2M1P5 1343 aa14.92□□□□□ -0.02
RPE-202ENST00000359429 AKNAQ7Z591 1439 aa14.91□□□□□ -0.02
RPE-202ENST00000359429 ABCA5Q8WWZ7 1642 aa14.91□□□□□ -0.02
RPE-202ENST00000359429 ANKRD30BQ9BXX2 1392 aa14.9□□□□□ -0.02
RPE-202ENST00000359429 SPATA31E1Q6ZUB1 1445 aa14.89□□□□□ -0.03
RPE-202ENST00000359429 CNGB1Q14028 1251 aaPredicted RBP14.87□□□□□ -0.03
RPE-202ENST00000359429 CDK13Q14004 1512 aaKnown RBP14.87□□□□□ -0.03
RPE-202ENST00000359429 RPRD2Q5VT52 1461 aaKnown RBP14.87□□□□□ -0.03
RPE-202ENST00000359429 TEX14Q8IWB6 1497 aa14.87□□□□□ -0.03
RPE-202ENST00000359429 KIF21AQ7Z4S6 1674 aa14.87□□□□□ -0.03
RPE-202ENST00000359429 EPRSP07814 1512 aaKnown RBP14.87□□□□□ -0.03
RPE-202ENST00000359429 MIA2Q96PC5 1412 aa14.86□□□□□ -0.03
RPE-202ENST00000359429 SENP3-EIF4A1A0A087X0R7 540 aa14.85□□□□□ -0.03
RPE-202ENST00000359429 ZNF644Q9H582 1327 aaPredicted RBP14.84□□□□□ -0.03
RPE-202ENST00000359429 PAK3O75914 559 aaPredicted RBP14.84□□□□□ -0.03
RPE-202ENST00000359429 SLC4A1APQ9BWU0 796 aaKnown RBP14.83□□□□□ -0.04
RPE-202ENST00000359429 DHX29Q7Z478 1369 aaKnown RBP14.82□□□□□ -0.04
RPE-202ENST00000359429 DAPK1P53355 1430 aa14.81□□□□□ -0.04
RPE-202ENST00000359429 ABCC5O15440 1437 aa14.81□□□□□ -0.04
RPE-202ENST00000359429 SMG6Q86US8 1419 aaKnown RBP14.81□□□□□ -0.04
RPE-202ENST00000359429 DEKP35659 375 aaKnown RBP14.8□□□□□ -0.04
RPE-202ENST00000359429 NOP58Q9Y2X3 529 aaKnown RBP14.8□□□□□ -0.04
RPE-202ENST00000359429 ROCK1Q13464 1354 aa14.79□□□□□ -0.04
RPE-202ENST00000359429 POLR3GLQ9BT43 218 aa14.79□□□□□ -0.04
RPE-202ENST00000359429 NUDCQ9Y266 331 aa14.79□□□□□ -0.04
RPE-202ENST00000359429 RNF123Q5XPI4 1314 aa14.78□□□□□ -0.04
RPE-202ENST00000359429 NBR1Q14596 966 aa14.78□□□□□ -0.04
RPE-202ENST00000359429 WDR62O43379 1518 aa14.77□□□□□ -0.04
RPE-202ENST00000359429 MRC2Q9UBG0 1479 aa14.77□□□□□ -0.04
RPE-202ENST00000359429 ZNF326Q5BKZ1 582 aaKnown RBP14.76□□□□□ -0.05
RPE-202ENST00000359429 CCDC136Q96JN2 1154 aa14.76□□□□□ -0.05
RPE-202ENST00000359429 IQGAP2Q13576 1575 aa14.75□□□□□ -0.05
RPE-202ENST00000359429 PZPP20742 1482 aa14.74□□□□□ -0.05
RPE-202ENST00000359429 MYT1LQ9UL68 1186 aa14.74□□□□□ -0.05
RPE-202ENST00000359429 USP47Q96K76 1375 aa14.74□□□□□ -0.05
RPE-202ENST00000359429 BCORL1Q5H9F3 1711 aa14.73□□□□□ -0.05
RPE-202ENST00000359429 TARBP1Q13395 1621 aaKnown RBP14.73□□□□□ -0.05
RPE-202ENST00000359429 PNISRQ8TF01 805 aaKnown RBP14.73□□□□□ -0.05
RPE-202ENST00000359429 DNMT1P26358 1616 aaKnown RBP14.73□□□□□ -0.05
RPE-202ENST00000359429 POLR1AO95602 1720 aaPredicted RBP14.73□□□□□ -0.05
RPE-202ENST00000359429 ERCC6Q03468 1493 aa14.72□□□□□ -0.05
RPE-202ENST00000359429 MBD5Q9P267 1494 aa14.71□□□□□ -0.05
RPE-202ENST00000359429 IPO9Q96P70 1041 aaKnown RBP14.69□□□□□ -0.06
RPE-202ENST00000359429 PKD2Q13563 968 aa14.68□□□□□ -0.06
RPE-202ENST00000359429 NUP153P49790 1475 aaKnown RBP14.67□□□□□ -0.06
RPE-202ENST00000359429 TMC1Q8TDI8 760 aa14.67□□□□□ -0.06
RPE-202ENST00000359429 ANP32AP39687 249 aaKnown RBP14.66□□□□□ -0.06
RPE-202ENST00000359429 KIAA1107Q9UPP5 1409 aa14.66□□□□□ -0.06
RPE-202ENST00000359429 ADAMTS12P58397 1594 aa14.65□□□□□ -0.06
RPE-202ENST00000359429 KDM5CP41229 1560 aa14.65□□□□□ -0.06
RPE-202ENST00000359429 PBRM1Q86U86 1689 aa14.65□□□□□ -0.06
RPE-202ENST00000359429 PRG4Q92954 1404 aaPredicted RBP14.64□□□□□ -0.07
RPE-202ENST00000359429 DISP1Q96F81 1524 aa14.64□□□□□ -0.07
RPE-202ENST00000359429 CFDP1Q9UEE9 299 aaPredicted RBP14.64□□□□□ -0.07
RPE-202ENST00000359429 ZNF777Q9ULD5 760 aaPredicted RBP14.64□□□□□ -0.07
RPE-202ENST00000359429 ARID4BQ4LE39 1312 aaPredicted RBP14.63□□□□□ -0.07
RPE-202ENST00000359429 ZBTB47Q9UFB7 747 aaPredicted RBP14.63□□□□□ -0.07
RPE-202ENST00000359429 CAMSAP2Q08AD1 1489 aa14.63□□□□□ -0.07
RPE-202ENST00000359429 LRPPRCP42704 1394 aaKnown RBP14.62□□□□□ -0.07
RPE-202ENST00000359429 EXOC6Q8TAG9 804 aa14.62□□□□□ -0.07
RPE-202ENST00000359429 CARD11Q9BXL7 1154 aa14.62□□□□□ -0.07
RPE-202ENST00000359429 KIF14Q15058 1648 aa14.61□□□□□ -0.07
RPE-202ENST00000359429 ST20-MTHFSA0A0A6YYL1 179 aa14.61□□□□□ -0.07
RPE-202ENST00000359429 RRP1P56182 461 aaKnown RBP14.6□□□□□ -0.07
RPE-202ENST00000359429 SALL2Q9Y467 1007 aaPredicted RBP14.6□□□□□ -0.07
RPE-202ENST00000359429 KIF15Q9NS87 1388 aa14.6□□□□□ -0.07
RPE-202ENST00000359429 KIAA0556O60303 1618 aa14.59□□□□□ -0.07
RPE-202ENST00000359429 KDM2AQ9Y2K7 1162 aa14.59□□□□□ -0.07
RPE-202ENST00000359429 IFT140Q96RY7 1462 aa14.59□□□□□ -0.07
RPE-202ENST00000359429 UHRF1BP1Q6BDS2 1440 aa14.59□□□□□ -0.07
RPE-202ENST00000359429 GPATCH8Q9UKJ3 1502 aaKnown RBP14.59□□□□□ -0.07
RPE-202ENST00000359429 MAPK8IP2Q13387 824 aaPredicted RBP14.59□□□□□ -0.07
RPE-202ENST00000359429 ROCK2O75116 1388 aaKnown RBP14.59□□□□□ -0.07
RPE-202ENST00000359429 RALGAPBQ86X10 1494 aa14.58□□□□□ -0.08
RPE-202ENST00000359429 TROQ12816 1431 aaPredicted RBP14.58□□□□□ -0.08
RPE-202ENST00000359429 MYBBP1AQ9BQG0 1328 aaKnown RBP14.57□□□□□ -0.08
RPE-202ENST00000359429 NPM2Q86SE8 214 aaKnown RBP14.57□□□□□ -0.08
RPE-202ENST00000359429 RAPGEF6Q8TEU7 1601 aa14.57□□□□□ -0.08
RPE-202ENST00000359429 BRD4O60885 1362 aaPredicted RBP14.57□□□□□ -0.08
RPE-202ENST00000359429 ADGRL2O95490 1459 aa14.57□□□□□ -0.08
RPE-202ENST00000359429 KIAA0586Q9BVV6 1533 aa14.56□□□□□ -0.08
RPE-202ENST00000359429 ANKRD50Q9ULJ7 1429 aa14.56□□□□□ -0.08
RPE-202ENST00000359429 ZNF608Q9ULD9 1512 aaPredicted RBP14.56□□□□□ -0.08
RPE-202ENST00000359429 RCAN3Q9UKA8 241 aa14.56□□□□□ -0.08
RPE-202ENST00000359429 NUP155O75694 1391 aa14.55□□□□□ -0.08
RPE-202ENST00000359429 ANKRD30AQ9BXX3 1397 aa14.55□□□□□ -0.08
RPE-202ENST00000359429 RALBP1Q15311 655 aa14.54□□□□□ -0.08
RPE-202ENST00000359429 RTL5Q5HYW3 569 aaPredicted RBP14.54□□□□□ -0.08
RPE-202ENST00000359429 DCAF11Q8TEB1 546 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms