RNA–Protein interactions for RNA: ENST00000359210.8

POLR3E-202, Transcript of RNA polymerase III subunit E, humanhuman

TSL 1 (best) BASIC

Gene POLR3E, Length 2,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3E-202ENST00000359210 ITSN2Q9NZM3 1697 aa24.4■■□□□ 1.5
POLR3E-202ENST00000359210 PPP1R15AO75807 674 aaPredicted RBP24.38■■□□□ 1.49
POLR3E-202ENST00000359210 ROCK1Q13464 1354 aa24.38■■□□□ 1.49
POLR3E-202ENST00000359210 GPATCH8Q9UKJ3 1502 aaKnown RBP24.38■■□□□ 1.49
POLR3E-202ENST00000359210 YTHDC1Q96MU7 727 aaKnown RBP24.38■■□□□ 1.49
POLR3E-202ENST00000359210 ATP10BO94823 1461 aa24.38■■□□□ 1.49
POLR3E-202ENST00000359210 CFDP1Q9UEE9 299 aaPredicted RBP24.37■■□□□ 1.49
POLR3E-202ENST00000359210 TONSLQ96HA7 1378 aa24.36■■□□□ 1.49
POLR3E-202ENST00000359210 TRIM52Q96A61 297 aa24.36■■□□□ 1.49
POLR3E-202ENST00000359210 PLEKHD1A6NEE1 506 aa24.35■■□□□ 1.49
POLR3E-202ENST00000359210 PTPRGP23470 1445 aa24.35■■□□□ 1.49
POLR3E-202ENST00000359210 CAMSAP2Q08AD1 1489 aa24.35■■□□□ 1.49
POLR3E-202ENST00000359210 DENND4BO75064 1496 aaPredicted RBP24.31■■□□□ 1.48
POLR3E-202ENST00000359210 SHROOM2Q13796 1616 aa24.29■■□□□ 1.48
POLR3E-202ENST00000359210 ZNF777Q9ULD5 760 aaPredicted RBP24.28■■□□□ 1.48
POLR3E-202ENST00000359210 MPHOSPH9Q99550 1183 aa24.27■■□□□ 1.48
POLR3E-202ENST00000359210 ABCC10Q5T3U5 1492 aa24.26■■□□□ 1.47
POLR3E-202ENST00000359210 CDC42BPAQ5VT25 1732 aa24.25■■□□□ 1.47
POLR3E-202ENST00000359210 ADGBQ8N7X0 1667 aa24.23■■□□□ 1.47
POLR3E-202ENST00000359210 CROCC2H7BZ55 1655 aa24.22■■□□□ 1.47
POLR3E-202ENST00000359210 NCOA1Q15788 1441 aa24.2■■□□□ 1.47
POLR3E-202ENST00000359210 KDM5BQ9UGL1 1544 aa24.19■■□□□ 1.46
POLR3E-202ENST00000359210 ADGRL2O95490 1459 aa24.18■■□□□ 1.46
POLR3E-202ENST00000359210 ERCC6L2Q5T890 1561 aa24.17■■□□□ 1.46
POLR3E-202ENST00000359210 FOXD1Q16676 465 aa24.15■■□□□ 1.46
POLR3E-202ENST00000359210 HIRIP3Q9BW71 556 aaPredicted RBP24.13■■□□□ 1.45
POLR3E-202ENST00000359210 ANKRD30AQ9BXX3 1397 aa24.13■■□□□ 1.45
POLR3E-202ENST00000359210 SLC4A1APQ9BWU0 796 aaKnown RBP24.11■■□□□ 1.45
POLR3E-202ENST00000359210 ANKRD30BQ9BXX2 1392 aa24.1■■□□□ 1.45
POLR3E-202ENST00000359210 CLASP1Q7Z460 1538 aa24.1■■□□□ 1.45
POLR3E-202ENST00000359210 DDX10Q13206 875 aaKnown RBP24.09■■□□□ 1.45
POLR3E-202ENST00000359210 ABCC2Q92887 1545 aa24.09■■□□□ 1.45
POLR3E-202ENST00000359210 SHANK2Q9UPX8 1470 aa24.09■■□□□ 1.45
POLR3E-202ENST00000359210 C9orf84Q5VXU9 1444 aa24.07■■□□□ 1.44
POLR3E-202ENST00000359210 PZPP20742 1482 aa24.07■■□□□ 1.44
POLR3E-202ENST00000359210 PREX2Q70Z35 1606 aa24.06■■□□□ 1.44
POLR3E-202ENST00000359210 CDC42BPBQ9Y5S2 1711 aa24.06■■□□□ 1.44
POLR3E-202ENST00000359210 RPRD2Q5VT52 1461 aaKnown RBP24.05■■□□□ 1.44
POLR3E-202ENST00000359210 TSPY4P0CV99 314 aa24.04■■□□□ 1.44
POLR3E-202ENST00000359210 TSPY10P0CW01 314 aa24.04■■□□□ 1.44
POLR3E-202ENST00000359210 ANKRD50Q9ULJ7 1429 aa24.04■■□□□ 1.44
POLR3E-202ENST00000359210 ARHGEF5Q12774 1597 aa24.04■■□□□ 1.44
POLR3E-202ENST00000359210 HNRNPMP52272 730 aaKnown RBP eCLIP24.04■■□□□ 1.442e-6■■■□□ 17.5
POLR3E-202ENST00000359210 L3MBTL2Q969R5 705 aa24.03■■□□□ 1.44
POLR3E-202ENST00000359210 SAMD9LQ8IVG5 1584 aa24.02■■□□□ 1.44
POLR3E-202ENST00000359210 MBD5Q9P267 1494 aa24.02■■□□□ 1.44
POLR3E-202ENST00000359210 TTC37Q6PGP7 1564 aa24■■□□□ 1.43
POLR3E-202ENST00000359210 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.99■■□□□ 1.43
POLR3E-202ENST00000359210 CCDC141Q6ZP82 1450 aa23.97■■□□□ 1.43
POLR3E-202ENST00000359210 TEX14Q8IWB6 1497 aa23.96■■□□□ 1.43
POLR3E-202ENST00000359210 KIAA1107Q9UPP5 1409 aa23.95■■□□□ 1.43
POLR3E-202ENST00000359210 ARHGAP5Q13017 1502 aa23.95■■□□□ 1.42
POLR3E-202ENST00000359210 KIF15Q9NS87 1388 aa23.95■■□□□ 1.42
POLR3E-202ENST00000359210 UHRF1BP1LA0JNW5 1464 aa23.94■■□□□ 1.42
POLR3E-202ENST00000359210 RSPH4AQ5TD94 716 aa23.94■■□□□ 1.42
POLR3E-202ENST00000359210 ZCCHC11Q5TAX3 1644 aaKnown RBP23.94■■□□□ 1.42
POLR3E-202ENST00000359210 PKD2Q13563 968 aa23.93■■□□□ 1.42
POLR3E-202ENST00000359210 MYO5CQ9NQX4 1742 aa23.92■■□□□ 1.42
POLR3E-202ENST00000359210 KCNH8Q96L42 1107 aa23.92■■□□□ 1.42
POLR3E-202ENST00000359210 NUP155O75694 1391 aa23.91■■□□□ 1.42
POLR3E-202ENST00000359210 SYCP2Q9BX26 1530 aa23.91■■□□□ 1.42
POLR3E-202ENST00000359210 HSPA5P11021 654 aaKnown RBP23.9■■□□□ 1.42
POLR3E-202ENST00000359210 EIF4G2P78344 907 aaKnown RBP eCLIP23.88■■□□□ 1.41
POLR3E-202ENST00000359210 KDM5DQ9BY66 1539 aa23.88■■□□□ 1.41
POLR3E-202ENST00000359210 NBPF8Q3BBV2 869 aa23.87■■□□□ 1.41
POLR3E-202ENST00000359210 MAST1Q9Y2H9 1570 aa23.84■■□□□ 1.41
POLR3E-202ENST00000359210 PLEKHH2Q8IVE3 1493 aa23.84■■□□□ 1.41
POLR3E-202ENST00000359210 ANP32CO43423 234 aa23.83■■□□□ 1.41
POLR3E-202ENST00000359210 PLCH2O75038 1416 aa23.82■■□□□ 1.4
POLR3E-202ENST00000359210 WASHC2AQ641Q2 1341 aa23.79■■□□□ 1.4
POLR3E-202ENST00000359210 ARHGEF12Q9NZN5 1544 aa23.77■■□□□ 1.4
POLR3E-202ENST00000359210 CCER2I3L3R5 266 aa23.76■■□□□ 1.39
POLR3E-202ENST00000359210 EFCAB2Q5VUJ9 269 aa23.76■■□□□ 1.39
POLR3E-202ENST00000359210 PLXNC1O60486 1568 aa23.76■■□□□ 1.39
POLR3E-202ENST00000359210 FAM135AQ9P2D6 1515 aa23.74■■□□□ 1.39
POLR3E-202ENST00000359210 SPATA31E1Q6ZUB1 1445 aa23.71■■□□□ 1.39
POLR3E-202ENST00000359210 ABCC1P33527 1531 aa23.71■■□□□ 1.39
POLR3E-202ENST00000359210 UNC13BO14795 1591 aa23.71■■□□□ 1.39
POLR3E-202ENST00000359210 C11orf95C9JLR9 678 aaPredicted RBP23.69■■□□□ 1.38
POLR3E-202ENST00000359210 DUOX2Q9NRD8 1548 aa23.68■■□□□ 1.38
POLR3E-202ENST00000359210 WDR7Q9Y4E6 1490 aa23.68■■□□□ 1.38
POLR3E-202ENST00000359210 ZNF326Q5BKZ1 582 aaKnown RBP23.68■■□□□ 1.38
POLR3E-202ENST00000359210 CCDC7Q96M83 1385 aa23.67■■□□□ 1.38
POLR3E-202ENST00000359210 ARAP3Q8WWN8 1544 aa23.67■■□□□ 1.38
POLR3E-202ENST00000359210 TRAPPC8Q9Y2L5 1435 aa23.65■■□□□ 1.38
POLR3E-202ENST00000359210 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.65■■□□□ 1.386e-7■□□□□ 10.3
POLR3E-202ENST00000359210 UHRF1BP1Q6BDS2 1440 aa23.65■■□□□ 1.38
POLR3E-202ENST00000359210 CNTLNQ9NXG0 1405 aa23.64■■□□□ 1.37
POLR3E-202ENST00000359210 ERBINQ96RT1 1412 aa23.63■■□□□ 1.37
POLR3E-202ENST00000359210 IQGAP3Q86VI3 1631 aa23.62■■□□□ 1.37
POLR3E-202ENST00000359210 POLR1AO95602 1720 aaPredicted RBP23.62■■□□□ 1.37
POLR3E-202ENST00000359210 OSCARQ8IYS5 282 aa23.61■■□□□ 1.37
POLR3E-202ENST00000359210 USP47Q96K76 1375 aa23.59■■□□□ 1.37
POLR3E-202ENST00000359210 KIF7Q2M1P5 1343 aa23.59■■□□□ 1.37
POLR3E-202ENST00000359210 MAGI2Q86UL8 1455 aa23.58■■□□□ 1.37
POLR3E-202ENST00000359210 RALGAPBQ86X10 1494 aa23.58■■□□□ 1.37
POLR3E-202ENST00000359210 CCDC144AA2RUR9 1427 aa23.58■■□□□ 1.37
POLR3E-202ENST00000359210 ABCA9Q8IUA7 1624 aa23.58■■□□□ 1.37
POLR3E-202ENST00000359210 SPAG9O60271 1321 aaKnown RBP23.58■■□□□ 1.36
POLR3E-202ENST00000359210 MYT1Q01538 1121 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 1096.8 ms