RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 DCAF11Q8TEB1 546 aa15.25■□□□□ 0.03
SSU72-202ENST00000359060 SUPT6HQ7KZ85 1726 aaKnown RBP15.25■□□□□ 0.03
SSU72-202ENST00000359060 ANKRD30AQ9BXX3 1397 aa15.25■□□□□ 0.03
SSU72-202ENST00000359060 CTTNBP2Q8WZ74 1663 aa15.23■□□□□ 0.03
SSU72-202ENST00000359060 MYT1Q01538 1121 aa15.23■□□□□ 0.03
SSU72-202ENST00000359060 PRG4Q92954 1404 aaPredicted RBP15.22■□□□□ 0.03
SSU72-202ENST00000359060 HECW1Q76N89 1606 aa15.22■□□□□ 0.03
SSU72-202ENST00000359060 CFAP43Q8NDM7 1665 aa15.21■□□□□ 0.02
SSU72-202ENST00000359060 KIAA0586Q9BVV6 1533 aa15.19■□□□□ 0.02
SSU72-202ENST00000359060 KIF21AQ7Z4S6 1674 aa15.19■□□□□ 0.02
SSU72-202ENST00000359060 PTPN23Q9H3S7 1636 aa15.19■□□□□ 0.02
SSU72-202ENST00000359060 WASHC2AQ641Q2 1341 aa15.19■□□□□ 0.02
SSU72-202ENST00000359060 MIA2Q96PC5 1412 aa15.19■□□□□ 0.02
SSU72-202ENST00000359060 PTPRGP23470 1445 aa15.17■□□□□ 0.02
SSU72-202ENST00000359060 NBPF8Q3BBV2 869 aa15.16■□□□□ 0.02
SSU72-202ENST00000359060 CHGAP10645 457 aaKnown RBP15.15■□□□□ 0.02
SSU72-202ENST00000359060 DAPK1P53355 1430 aa15.14■□□□□ 0.01
SSU72-202ENST00000359060 PLB1Q6P1J6 1458 aa15.14■□□□□ 0.01
SSU72-202ENST00000359060 ABCA5Q8WWZ7 1642 aa15.13■□□□□ 0.01
SSU72-202ENST00000359060 THOC2Q8NI27 1593 aaKnown RBP15.13■□□□□ 0.01
SSU72-202ENST00000359060 GRIN2AQ12879 1464 aa15.13■□□□□ 0.01
SSU72-202ENST00000359060 TROQ12816 1431 aaPredicted RBP15.13■□□□□ 0.01
SSU72-202ENST00000359060 PRKRIP1Q9H875 184 aaPredicted RBP15.13■□□□□ 0.01
SSU72-202ENST00000359060 UGGT2Q9NYU1 1516 aa15.11■□□□□ 0.01
SSU72-202ENST00000359060 NPM1P06748 294 aaKnown RBP eCLIP15.1■□□□□ 0.01
SSU72-202ENST00000359060 TSHZ2Q9NRE2 1034 aa15.1■□□□□ 0.01
SSU72-202ENST00000359060 ANKRD50Q9ULJ7 1429 aa15.09■□□□□ 0.01
SSU72-202ENST00000359060 ABCC5O15440 1437 aa15.09■□□□□ 0.01
SSU72-202ENST00000359060 CCDC7Q96M83 1385 aa15.09■□□□□ 0.01
SSU72-202ENST00000359060 KIF7Q2M1P5 1343 aa15.08■□□□□ 0.01
SSU72-202ENST00000359060 ST20-MTHFSA0A0A6YYL1 179 aa15.08■□□□□ 0
SSU72-202ENST00000359060 USP47Q96K76 1375 aa15.07■□□□□ 0
SSU72-202ENST00000359060 SAMD9Q5K651 1589 aa15.06■□□□□ 0
SSU72-202ENST00000359060 KIF15Q9NS87 1388 aa15.06■□□□□ 0
SSU72-202ENST00000359060 C11orf95C9JLR9 678 aaPredicted RBP15.06■□□□□ 0
SSU72-202ENST00000359060 ADAMTS12P58397 1594 aa15.06■□□□□ 0
SSU72-202ENST00000359060 CCDC136Q96JN2 1154 aa15.06■□□□□ 0
SSU72-202ENST00000359060 ROCK2O75116 1388 aaKnown RBP15.05■□□□□ 0
SSU72-202ENST00000359060 CCDC184Q52MB2 194 aa15.05■□□□□ 0
SSU72-202ENST00000359060 EFCAB2Q5VUJ9 269 aa15.05■□□□□ -0
SSU72-202ENST00000359060 B4GALNT3Q6L9W6 998 aa15.05■□□□□ -0
SSU72-202ENST00000359060 CC2D1BQ5T0F9 858 aaKnown RBP15.05■□□□□ -0
SSU72-202ENST00000359060 SYNJ2O15056 1496 aa15.04■□□□□ -0
SSU72-202ENST00000359060 MAGI3Q5TCQ9 1506 aa15.04■□□□□ -0
SSU72-202ENST00000359060 SENP3Q9H4L4 574 aaPredicted RBP15.04■□□□□ -0
SSU72-202ENST00000359060 ANKRD30BQ9BXX2 1392 aa15.04■□□□□ -0
SSU72-202ENST00000359060 NUP153P49790 1475 aaKnown RBP15.03■□□□□ -0
SSU72-202ENST00000359060 TARBP1Q13395 1621 aaKnown RBP15.03■□□□□ -0
SSU72-202ENST00000359060 ROCK1Q13464 1354 aa15.03■□□□□ -0
SSU72-202ENST00000359060 RSPH4AQ5TD94 716 aa15.03■□□□□ -0
SSU72-202ENST00000359060 CNTLNQ9NXG0 1405 aa15.02■□□□□ -0
SSU72-202ENST00000359060 MAGI1Q96QZ7 1491 aaPredicted RBP15.01□□□□□ -0.01
SSU72-202ENST00000359060 PPP4R2Q9NY27 417 aa15.01□□□□□ -0.01
SSU72-202ENST00000359060 CAMSAP2Q08AD1 1489 aa15□□□□□ -0.01
SSU72-202ENST00000359060 WDR62O43379 1518 aa15□□□□□ -0.01
SSU72-202ENST00000359060 PBRM1Q86U86 1689 aa15□□□□□ -0.01
SSU72-202ENST00000359060 C9orf84Q5VXU9 1444 aa14.99□□□□□ -0.01
SSU72-202ENST00000359060 ARHGEF11O15085 1522 aa14.99□□□□□ -0.01
SSU72-202ENST00000359060 KIAA1107Q9UPP5 1409 aa14.99□□□□□ -0.01
SSU72-202ENST00000359060 NCOA1Q15788 1441 aa14.98□□□□□ -0.01
SSU72-202ENST00000359060 AKNAQ7Z591 1439 aa14.98□□□□□ -0.01
SSU72-202ENST00000359060 CCDC144AA2RUR9 1427 aa14.98□□□□□ -0.01
SSU72-202ENST00000359060 TCOF1Q13428 1488 aaKnown RBP14.97□□□□□ -0.01
SSU72-202ENST00000359060 RBM19Q9Y4C8 960 aaKnown RBP14.97□□□□□ -0.01
SSU72-202ENST00000359060 DISP1Q96F81 1524 aa14.97□□□□□ -0.01
SSU72-202ENST00000359060 WDR43Q15061 677 aaKnown RBP eCLIP14.96□□□□□ -0.01
SSU72-202ENST00000359060 TMF1P82094 1093 aa14.96□□□□□ -0.01
SSU72-202ENST00000359060 KIAA0556O60303 1618 aa14.96□□□□□ -0.02
SSU72-202ENST00000359060 RAPGEF6Q8TEU7 1601 aa14.96□□□□□ -0.02
SSU72-202ENST00000359060 KNSTRNQ9Y448 316 aa14.95□□□□□ -0.02
SSU72-202ENST00000359060 SPAG9O60271 1321 aaKnown RBP14.95□□□□□ -0.02
SSU72-202ENST00000359060 GPATCH8Q9UKJ3 1502 aaKnown RBP14.95□□□□□ -0.02
SSU72-202ENST00000359060 KIF3BO15066 747 aa14.94□□□□□ -0.02
SSU72-202ENST00000359060 RPRD2Q5VT52 1461 aaKnown RBP14.93□□□□□ -0.02
SSU72-202ENST00000359060 EIF4G3O43432 1585 aaKnown RBP14.93□□□□□ -0.02
SSU72-202ENST00000359060 NPM2Q86SE8 214 aaKnown RBP14.92□□□□□ -0.02
SSU72-202ENST00000359060 ZBED9Q6R2W3 1325 aa14.91□□□□□ -0.02
SSU72-202ENST00000359060 NBPF1Q3BBV0 1214 aa14.9□□□□□ -0.02
SSU72-202ENST00000359060 KTN1Q86UP2 1357 aaKnown RBP14.9□□□□□ -0.02
SSU72-202ENST00000359060 ARHGAP5Q13017 1502 aa14.9□□□□□ -0.02
SSU72-202ENST00000359060 AFAP1Q8N556 730 aa14.9□□□□□ -0.02
SSU72-202ENST00000359060 RALBP1Q15311 655 aa14.9□□□□□ -0.02
SSU72-202ENST00000359060 ATP10BO94823 1461 aa14.89□□□□□ -0.03
SSU72-202ENST00000359060 GGT6Q6P531 493 aa14.88□□□□□ -0.03
SSU72-202ENST00000359060 CDCA8Q53HL2 280 aa14.88□□□□□ -0.03
SSU72-202ENST00000359060 NUDCQ9Y266 331 aa14.88□□□□□ -0.03
SSU72-202ENST00000359060 KANK1Q14678 1352 aa14.87□□□□□ -0.03
SSU72-202ENST00000359060 KDM6BO15054 1643 aa14.87□□□□□ -0.03
SSU72-202ENST00000359060 ANP32AP39687 249 aaKnown RBP14.86□□□□□ -0.03
SSU72-202ENST00000359060 PANK3Q9H999 370 aa14.86□□□□□ -0.03
SSU72-202ENST00000359060 NLRP13Q86W25 1043 aa14.86□□□□□ -0.03
SSU72-202ENST00000359060 DAXXQ9UER7 740 aaPredicted RBP14.86□□□□□ -0.03
SSU72-202ENST00000359060 CANXP27824 592 aaKnown RBP14.85□□□□□ -0.03
SSU72-202ENST00000359060 MYBBP1AQ9BQG0 1328 aaKnown RBP14.85□□□□□ -0.03
SSU72-202ENST00000359060 ANP32EQ9BTT0 268 aa14.85□□□□□ -0.03
SSU72-202ENST00000359060 KIF14Q15058 1648 aa14.84□□□□□ -0.03
SSU72-202ENST00000359060 STAG3Q9UJ98 1225 aa14.84□□□□□ -0.03
SSU72-202ENST00000359060 TNNT2P45379 298 aaPredicted RBP14.83□□□□□ -0.03
SSU72-202ENST00000359060 ERICH6BQ5W0A0 696 aa14.83□□□□□ -0.04
SSU72-202ENST00000359060 ARID4BQ4LE39 1312 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms