RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 PRKRIP1Q9H875 184 aaPredicted RBP16.31■□□□□ 0.2
COL20A1-201ENST00000358894 PCF11O94913 1555 aaKnown RBP16.31■□□□□ 0.2
COL20A1-201ENST00000358894 ZBTB47Q9UFB7 747 aaPredicted RBP16.3■□□□□ 0.2
COL20A1-201ENST00000358894 EFCAB5A4FU69 1503 aa16.28■□□□□ 0.2
COL20A1-201ENST00000358894 NPM1P06748 294 aaKnown RBP eCLIP16.28■□□□□ 0.2
COL20A1-201ENST00000358894 WASHC2AQ641Q2 1341 aa16.28■□□□□ 0.2
COL20A1-201ENST00000358894 DNMBPQ6XZF7 1577 aa16.28■□□□□ 0.2
COL20A1-201ENST00000358894 ABCA10Q8WWZ4 1543 aa16.26■□□□□ 0.19
COL20A1-201ENST00000358894 DEKP35659 375 aaKnown RBP16.26■□□□□ 0.19
COL20A1-201ENST00000358894 KNSTRNQ9Y448 316 aa16.26■□□□□ 0.19
COL20A1-201ENST00000358894 HFM1A2PYH4 1435 aa16.25■□□□□ 0.19
COL20A1-201ENST00000358894 GLIPR1L2Q4G1C9 344 aa16.24■□□□□ 0.19
COL20A1-201ENST00000358894 ST20-MTHFSA0A0A6YYL1 179 aa16.23■□□□□ 0.19
COL20A1-201ENST00000358894 ROCK2O75116 1388 aaKnown RBP16.23■□□□□ 0.19
COL20A1-201ENST00000358894 ARXQ96QS3 562 aa16.22■□□□□ 0.19
COL20A1-201ENST00000358894 NAIPQ13075 1403 aa16.21■□□□□ 0.19
COL20A1-201ENST00000358894 KIF7Q2M1P5 1343 aa16.2■□□□□ 0.18
COL20A1-201ENST00000358894 TMF1P82094 1093 aa16.19■□□□□ 0.18
COL20A1-201ENST00000358894 MAP3K1Q13233 1512 aa16.19■□□□□ 0.18
COL20A1-201ENST00000358894 USP47Q96K76 1375 aa16.19■□□□□ 0.18
COL20A1-201ENST00000358894 CCDC7Q96M83 1385 aa16.19■□□□□ 0.18
COL20A1-201ENST00000358894 NBPF8Q3BBV2 869 aa16.19■□□□□ 0.18
COL20A1-201ENST00000358894 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.19■□□□□ 0.18
COL20A1-201ENST00000358894 PRDM2Q13029 1718 aa16.18■□□□□ 0.18
COL20A1-201ENST00000358894 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.17■□□□□ 0.18
COL20A1-201ENST00000358894 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.17■□□□□ 0.18
COL20A1-201ENST00000358894 GRIN2BQ13224 1484 aa16.16■□□□□ 0.18
COL20A1-201ENST00000358894 STAG3Q9UJ98 1225 aa16.16■□□□□ 0.18
COL20A1-201ENST00000358894 CCDC184Q52MB2 194 aa16.16■□□□□ 0.18
COL20A1-201ENST00000358894 MAPKBP1O60336 1514 aa16.15■□□□□ 0.18
COL20A1-201ENST00000358894 NUDCQ9Y266 331 aa16.15■□□□□ 0.18
COL20A1-201ENST00000358894 EHBP1L1Q8N3D4 1523 aa16.15■□□□□ 0.18
COL20A1-201ENST00000358894 CDCA8Q53HL2 280 aa16.15■□□□□ 0.18
COL20A1-201ENST00000358894 CDK13Q14004 1512 aaKnown RBP16.15■□□□□ 0.18
COL20A1-201ENST00000358894 TNNT2P45379 298 aaPredicted RBP16.15■□□□□ 0.18
COL20A1-201ENST00000358894 NEUROD2Q15784 382 aa16.15■□□□□ 0.18
COL20A1-201ENST00000358894 KTN1Q86UP2 1357 aaKnown RBP16.14■□□□□ 0.17
COL20A1-201ENST00000358894 ERICH6BQ5W0A0 696 aa16.14■□□□□ 0.17
COL20A1-201ENST00000358894 CNTLNQ9NXG0 1405 aa16.13■□□□□ 0.17
COL20A1-201ENST00000358894 URB2Q14146 1524 aaKnown RBP16.13■□□□□ 0.17
COL20A1-201ENST00000358894 NEFMP07197 916 aa16.12■□□□□ 0.17
COL20A1-201ENST00000358894 ZBED9Q6R2W3 1325 aa16.12■□□□□ 0.17
COL20A1-201ENST00000358894 RALBP1Q15311 655 aa16.12■□□□□ 0.17
COL20A1-201ENST00000358894 PRG4Q92954 1404 aaPredicted RBP16.11■□□□□ 0.17
COL20A1-201ENST00000358894 EFCAB2Q5VUJ9 269 aa16.1■□□□□ 0.17
COL20A1-201ENST00000358894 LAS1LQ9Y4W2 734 aaKnown RBP16.1■□□□□ 0.17
COL20A1-201ENST00000358894 PTPRGP23470 1445 aa16.1■□□□□ 0.17
COL20A1-201ENST00000358894 RCAN3Q9UKA8 241 aa16.1■□□□□ 0.17
COL20A1-201ENST00000358894 PTPRKQ15262 1439 aa16.1■□□□□ 0.17
COL20A1-201ENST00000358894 EPRSP07814 1512 aaKnown RBP16.09■□□□□ 0.17
COL20A1-201ENST00000358894 SUPT6HQ7KZ85 1726 aaKnown RBP16.09■□□□□ 0.17
COL20A1-201ENST00000358894 ANKRD50Q9ULJ7 1429 aa16.09■□□□□ 0.17
COL20A1-201ENST00000358894 NOP58Q9Y2X3 529 aaKnown RBP16.08■□□□□ 0.17
COL20A1-201ENST00000358894 NLRP13Q86W25 1043 aa16.08■□□□□ 0.16
COL20A1-201ENST00000358894 MIA2Q96PC5 1412 aa16.08■□□□□ 0.16
COL20A1-201ENST00000358894 CUL7Q14999 1698 aa16.08■□□□□ 0.16
COL20A1-201ENST00000358894 C11orf95C9JLR9 678 aaPredicted RBP16.08■□□□□ 0.16
COL20A1-201ENST00000358894 CCDC144AA2RUR9 1427 aa16.07■□□□□ 0.16
COL20A1-201ENST00000358894 KIF15Q9NS87 1388 aa16.06■□□□□ 0.16
COL20A1-201ENST00000358894 RGS3P49796 1198 aa16.06■□□□□ 0.16
COL20A1-201ENST00000358894 RSPH4AQ5TD94 716 aa16.06■□□□□ 0.16
COL20A1-201ENST00000358894 MRC2Q9UBG0 1479 aa16.04■□□□□ 0.16
COL20A1-201ENST00000358894 HECW1Q76N89 1606 aa16.04■□□□□ 0.16
COL20A1-201ENST00000358894 LAMC3Q9Y6N6 1575 aa16.04■□□□□ 0.16
COL20A1-201ENST00000358894 DAPK1P53355 1430 aa16.04■□□□□ 0.16
COL20A1-201ENST00000358894 MYBBP1AQ9BQG0 1328 aaKnown RBP16.04■□□□□ 0.16
COL20A1-201ENST00000358894 PANK3Q9H999 370 aa16.04■□□□□ 0.16
COL20A1-201ENST00000358894 KIF3BO15066 747 aa16.03■□□□□ 0.16
COL20A1-201ENST00000358894 PTPN23Q9H3S7 1636 aa16.03■□□□□ 0.16
COL20A1-201ENST00000358894 GGT6Q6P531 493 aa16.02■□□□□ 0.16
COL20A1-201ENST00000358894 SNAPC4Q5SXM2 1469 aa16.02■□□□□ 0.16
COL20A1-201ENST00000358894 IQGAP2Q13576 1575 aa16.01■□□□□ 0.15
COL20A1-201ENST00000358894 SPAG9O60271 1321 aaKnown RBP16.01■□□□□ 0.15
COL20A1-201ENST00000358894 PLPPR3Q6T4P5 718 aa16.01■□□□□ 0.15
COL20A1-201ENST00000358894 FRAT1Q92837 279 aaPredicted RBP16.01■□□□□ 0.15
COL20A1-201ENST00000358894 ANO8Q9HCE9 1232 aaPredicted RBP16.01■□□□□ 0.15
COL20A1-201ENST00000358894 TROQ12816 1431 aaPredicted RBP16■□□□□ 0.15
COL20A1-201ENST00000358894 KANK1Q14678 1352 aa16■□□□□ 0.15
COL20A1-201ENST00000358894 SLC24A1O60721 1099 aa16■□□□□ 0.15
COL20A1-201ENST00000358894 SAFB2Q14151 953 aaKnown RBP eCLIP16■□□□□ 0.15
COL20A1-201ENST00000358894 ESF1Q9H501 851 aaKnown RBP16■□□□□ 0.15
COL20A1-201ENST00000358894 UPF2Q9HAU5 1272 aaKnown RBP15.99■□□□□ 0.15
COL20A1-201ENST00000358894 IFT140Q96RY7 1462 aa15.98■□□□□ 0.15
COL20A1-201ENST00000358894 PLIN1O60240 522 aa15.98■□□□□ 0.15
COL20A1-201ENST00000358894 CFAP53Q96M91 514 aa15.97■□□□□ 0.15
COL20A1-201ENST00000358894 ANKRD30BQ9BXX2 1392 aa15.97■□□□□ 0.15
COL20A1-201ENST00000358894 CCDC146Q8IYE0 955 aa15.96■□□□□ 0.15
COL20A1-201ENST00000358894 KIAA1107Q9UPP5 1409 aa15.96■□□□□ 0.15
COL20A1-201ENST00000358894 PPM1GO15355 546 aaPredicted RBP15.96■□□□□ 0.15
COL20A1-201ENST00000358894 EXOC6Q8TAG9 804 aa15.96■□□□□ 0.15
COL20A1-201ENST00000358894 KIAA0586Q9BVV6 1533 aa15.96■□□□□ 0.15
COL20A1-201ENST00000358894 ABCC5O15440 1437 aa15.96■□□□□ 0.15
COL20A1-201ENST00000358894 NBPF1Q3BBV0 1214 aa15.95■□□□□ 0.14
COL20A1-201ENST00000358894 ZNF608Q9ULD9 1512 aaPredicted RBP15.95■□□□□ 0.14
COL20A1-201ENST00000358894 PLB1Q6P1J6 1458 aa15.94■□□□□ 0.14
COL20A1-201ENST00000358894 MORC1Q86VD1 984 aa15.93■□□□□ 0.14
COL20A1-201ENST00000358894 C9orf84Q5VXU9 1444 aa15.93■□□□□ 0.14
COL20A1-201ENST00000358894 DDRGK1Q96HY6 314 aa15.92■□□□□ 0.14
COL20A1-201ENST00000358894 ROCK1Q13464 1354 aa15.91■□□□□ 0.14
COL20A1-201ENST00000358894 U2SURPO15042 1029 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms