RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 PTPRKQ15262 1439 aa19.21■□□□□ 0.67
SIRPA-202ENST00000358771 EPRSP07814 1512 aaKnown RBP19.21■□□□□ 0.67
SIRPA-202ENST00000358771 CC2D1BQ5T0F9 858 aaKnown RBP19.21■□□□□ 0.67
SIRPA-202ENST00000358771 IFT140Q96RY7 1462 aa19.21■□□□□ 0.67
SIRPA-202ENST00000358771 WASHC2AQ641Q2 1341 aa19.19■□□□□ 0.66
SIRPA-202ENST00000358771 CCDC136Q96JN2 1154 aa19.18■□□□□ 0.66
SIRPA-202ENST00000358771 NBPF8Q3BBV2 869 aa19.17■□□□□ 0.66
SIRPA-202ENST00000358771 EHBP1L1Q8N3D4 1523 aa19.17■□□□□ 0.66
SIRPA-202ENST00000358771 ST20-MTHFSA0A0A6YYL1 179 aa19.16■□□□□ 0.66
SIRPA-202ENST00000358771 MYT1Q01538 1121 aa19.16■□□□□ 0.66
SIRPA-202ENST00000358771 IQGAP2Q13576 1575 aa19.16■□□□□ 0.66
SIRPA-202ENST00000358771 B4GALNT3Q6L9W6 998 aa19.15■□□□□ 0.66
SIRPA-202ENST00000358771 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.15■□□□□ 0.66
SIRPA-202ENST00000358771 MAPKBP1O60336 1514 aa19.14■□□□□ 0.66
SIRPA-202ENST00000358771 EFCAB2Q5VUJ9 269 aa19.14■□□□□ 0.65
SIRPA-202ENST00000358771 PRKRIP1Q9H875 184 aaPredicted RBP19.14■□□□□ 0.65
SIRPA-202ENST00000358771 PLB1Q6P1J6 1458 aa19.13■□□□□ 0.65
SIRPA-202ENST00000358771 KIAA0586Q9BVV6 1533 aa19.12■□□□□ 0.65
SIRPA-202ENST00000358771 ROCK2O75116 1388 aaKnown RBP19.12■□□□□ 0.65
SIRPA-202ENST00000358771 SUPT6HQ7KZ85 1726 aaKnown RBP19.11■□□□□ 0.65
SIRPA-202ENST00000358771 NPM2Q86SE8 214 aaKnown RBP19.09■□□□□ 0.65
SIRPA-202ENST00000358771 ANKRD50Q9ULJ7 1429 aa19.09■□□□□ 0.65
SIRPA-202ENST00000358771 WDR43Q15061 677 aaKnown RBP eCLIP19.08■□□□□ 0.65
SIRPA-202ENST00000358771 MIA2Q96PC5 1412 aa19.08■□□□□ 0.65
SIRPA-202ENST00000358771 KIF7Q2M1P5 1343 aa19.08■□□□□ 0.65
SIRPA-202ENST00000358771 HECW1Q76N89 1606 aa19.08■□□□□ 0.64
SIRPA-202ENST00000358771 PLPPR3Q6T4P5 718 aa19.08■□□□□ 0.64
SIRPA-202ENST00000358771 STAG3Q9UJ98 1225 aa19.08■□□□□ 0.64
SIRPA-202ENST00000358771 KIF15Q9NS87 1388 aa19.07■□□□□ 0.64
SIRPA-202ENST00000358771 USP47Q96K76 1375 aa19.07■□□□□ 0.64
SIRPA-202ENST00000358771 TROQ12816 1431 aaPredicted RBP19.07■□□□□ 0.64
SIRPA-202ENST00000358771 CCDC184Q52MB2 194 aa19.07■□□□□ 0.64
SIRPA-202ENST00000358771 GGT6Q6P531 493 aa19.07■□□□□ 0.64
SIRPA-202ENST00000358771 KIF3BO15066 747 aa19.06■□□□□ 0.64
SIRPA-202ENST00000358771 DAPK1P53355 1430 aa19.06■□□□□ 0.64
SIRPA-202ENST00000358771 KNSTRNQ9Y448 316 aa19.06■□□□□ 0.64
SIRPA-202ENST00000358771 TSHZ2Q9NRE2 1034 aa19.05■□□□□ 0.64
SIRPA-202ENST00000358771 PTPN23Q9H3S7 1636 aa19.05■□□□□ 0.64
SIRPA-202ENST00000358771 C11orf95C9JLR9 678 aaPredicted RBP19.05■□□□□ 0.64
SIRPA-202ENST00000358771 DAXXQ9UER7 740 aaPredicted RBP19.04■□□□□ 0.64
SIRPA-202ENST00000358771 GRIN2AQ12879 1464 aa19.04■□□□□ 0.64
SIRPA-202ENST00000358771 CCDC7Q96M83 1385 aa19.04■□□□□ 0.64
SIRPA-202ENST00000358771 CANXP27824 592 aaKnown RBP19.03■□□□□ 0.64
SIRPA-202ENST00000358771 SPAG9O60271 1321 aaKnown RBP19.03■□□□□ 0.64
SIRPA-202ENST00000358771 THOC2Q8NI27 1593 aaKnown RBP19.03■□□□□ 0.64
SIRPA-202ENST00000358771 RSPH4AQ5TD94 716 aa19.02■□□□□ 0.64
SIRPA-202ENST00000358771 TNNT2P45379 298 aaPredicted RBP19.02■□□□□ 0.63
SIRPA-202ENST00000358771 TMF1P82094 1093 aa19.02■□□□□ 0.63
SIRPA-202ENST00000358771 KIF21AQ7Z4S6 1674 aa19.01■□□□□ 0.63
SIRPA-202ENST00000358771 ABCC5O15440 1437 aa19■□□□□ 0.63
SIRPA-202ENST00000358771 PPP4R2Q9NY27 417 aa19■□□□□ 0.63
SIRPA-202ENST00000358771 CCDC144AA2RUR9 1427 aa18.99■□□□□ 0.63
SIRPA-202ENST00000358771 AFAP1Q8N556 730 aa18.99■□□□□ 0.63
SIRPA-202ENST00000358771 CTTNBP2Q8WZ74 1663 aa18.97■□□□□ 0.63
SIRPA-202ENST00000358771 BCL11AQ9H165 835 aa18.97■□□□□ 0.63
SIRPA-202ENST00000358771 SAFB2Q14151 953 aaKnown RBP eCLIP18.95■□□□□ 0.62
SIRPA-202ENST00000358771 NEUROD2Q15784 382 aa18.95■□□□□ 0.62
SIRPA-202ENST00000358771 RBM19Q9Y4C8 960 aaKnown RBP18.95■□□□□ 0.62
SIRPA-202ENST00000358771 ARHGEF11O15085 1522 aa18.94■□□□□ 0.62
SIRPA-202ENST00000358771 SYNJ2O15056 1496 aa18.94■□□□□ 0.62
SIRPA-202ENST00000358771 NBPF1Q3BBV0 1214 aa18.93■□□□□ 0.62
SIRPA-202ENST00000358771 NUTM2DQ5VT03 806 aaPredicted RBP18.93■□□□□ 0.62
SIRPA-202ENST00000358771 C9orf84Q5VXU9 1444 aa18.93■□□□□ 0.62
SIRPA-202ENST00000358771 ANKRD30BQ9BXX2 1392 aa18.93■□□□□ 0.62
SIRPA-202ENST00000358771 ANP32AP39687 249 aaKnown RBP18.92■□□□□ 0.62
SIRPA-202ENST00000358771 ESF1Q9H501 851 aaKnown RBP18.92■□□□□ 0.62
SIRPA-202ENST00000358771 CNTLNQ9NXG0 1405 aa18.92■□□□□ 0.62
SIRPA-202ENST00000358771 CFAP43Q8NDM7 1665 aa18.91■□□□□ 0.62
SIRPA-202ENST00000358771 UGGT2Q9NYU1 1516 aa18.91■□□□□ 0.62
SIRPA-202ENST00000358771 CDCA8Q53HL2 280 aa18.9■□□□□ 0.62
SIRPA-202ENST00000358771 NUP153P49790 1475 aaKnown RBP18.9■□□□□ 0.62
SIRPA-202ENST00000358771 PANK3Q9H999 370 aa18.9■□□□□ 0.62
SIRPA-202ENST00000358771 KANK1Q14678 1352 aa18.9■□□□□ 0.62
SIRPA-202ENST00000358771 KTN1Q86UP2 1357 aaKnown RBP18.9■□□□□ 0.62
SIRPA-202ENST00000358771 KIAA1107Q9UPP5 1409 aa18.89■□□□□ 0.61
SIRPA-202ENST00000358771 CAMSAP2Q08AD1 1489 aa18.88■□□□□ 0.61
SIRPA-202ENST00000358771 NCOA1Q15788 1441 aa18.88■□□□□ 0.61
SIRPA-202ENST00000358771 ABCA5Q8WWZ7 1642 aa18.88■□□□□ 0.61
SIRPA-202ENST00000358771 ROCK1Q13464 1354 aa18.87■□□□□ 0.61
SIRPA-202ENST00000358771 RTL5Q5HYW3 569 aaPredicted RBP18.87■□□□□ 0.61
SIRPA-202ENST00000358771 MAGI1Q96QZ7 1491 aaPredicted RBP18.86■□□□□ 0.61
SIRPA-202ENST00000358771 RALBP1Q15311 655 aa18.86■□□□□ 0.61
SIRPA-202ENST00000358771 MLECQ14165 292 aa18.85■□□□□ 0.61
SIRPA-202ENST00000358771 ARHGAP5Q13017 1502 aa18.85■□□□□ 0.61
SIRPA-202ENST00000358771 MAGI3Q5TCQ9 1506 aa18.84■□□□□ 0.61
SIRPA-202ENST00000358771 ADAMTS12P58397 1594 aa18.84■□□□□ 0.61
SIRPA-202ENST00000358771 NLRP13Q86W25 1043 aa18.83■□□□□ 0.61
SIRPA-202ENST00000358771 AKNAQ7Z591 1439 aa18.83■□□□□ 0.61
SIRPA-202ENST00000358771 STK26Q9P289 416 aa18.83■□□□□ 0.61
SIRPA-202ENST00000358771 NUDCQ9Y266 331 aa18.83■□□□□ 0.6
SIRPA-202ENST00000358771 NBR1Q14596 966 aa18.83■□□□□ 0.6
SIRPA-202ENST00000358771 GPATCH8Q9UKJ3 1502 aaKnown RBP18.82■□□□□ 0.6
SIRPA-202ENST00000358771 ZBED9Q6R2W3 1325 aa18.82■□□□□ 0.6
SIRPA-202ENST00000358771 TRAK1Q9UPV9 953 aa18.8■□□□□ 0.6
SIRPA-202ENST00000358771 MYBBP1AQ9BQG0 1328 aaKnown RBP18.79■□□□□ 0.6
SIRPA-202ENST00000358771 PPM1GO15355 546 aaPredicted RBP18.78■□□□□ 0.6
SIRPA-202ENST00000358771 DISP1Q96F81 1524 aa18.78■□□□□ 0.6
SIRPA-202ENST00000358771 WDR62O43379 1518 aa18.77■□□□□ 0.6
SIRPA-202ENST00000358771 NEFMP07197 916 aa18.77■□□□□ 0.6
SIRPA-202ENST00000358771 RCAN3Q9UKA8 241 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms