RNA–Protein interactions for RNA: ENST00000357903.7

APP-204, Transcript of amyloid beta precursor protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APP, Length 3,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-204ENST00000357903 KIAA0586Q9BVV6 1533 aa22.27■■□□□ 1.16
APP-204ENST00000357903 GRIN2AQ12879 1464 aa22.27■■□□□ 1.16
APP-204ENST00000357903 SUPT16HQ9Y5B9 1047 aaKnown RBP22.27■■□□□ 1.16
APP-204ENST00000357903 MAGI3Q5TCQ9 1506 aa22.25■■□□□ 1.15
APP-204ENST00000357903 SENP3Q9H4L4 574 aaPredicted RBP22.25■■□□□ 1.15
APP-204ENST00000357903 MRS2Q9HD23 443 aa22.25■■□□□ 1.15
APP-204ENST00000357903 NUP155O75694 1391 aa22.24■■□□□ 1.15
APP-204ENST00000357903 PTPN23Q9H3S7 1636 aa22.24■■□□□ 1.15
APP-204ENST00000357903 PTPRGP23470 1445 aa22.23■■□□□ 1.15
APP-204ENST00000357903 DCAF11Q8TEB1 546 aa22.23■■□□□ 1.15
APP-204ENST00000357903 SALL2Q9Y467 1007 aaPredicted RBP22.22■■□□□ 1.15
APP-204ENST00000357903 HECW1Q76N89 1606 aa22.22■■□□□ 1.15
APP-204ENST00000357903 NBPF8Q3BBV2 869 aa22.2■■□□□ 1.14
APP-204ENST00000357903 ADAMTS12P58397 1594 aa22.19■■□□□ 1.14
APP-204ENST00000357903 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.19■■□□□ 1.14
APP-204ENST00000357903 CARD11Q9BXL7 1154 aa22.18■■□□□ 1.14
APP-204ENST00000357903 PBRM1Q86U86 1689 aa22.17■■□□□ 1.14
APP-204ENST00000357903 SAMD9Q5K651 1589 aa22.15■■□□□ 1.14
APP-204ENST00000357903 WASHC2AQ641Q2 1341 aa22.14■■□□□ 1.14
APP-204ENST00000357903 ANKRD30AQ9BXX3 1397 aa22.14■■□□□ 1.13
APP-204ENST00000357903 NUP153P49790 1475 aaKnown RBP22.14■■□□□ 1.13
APP-204ENST00000357903 DAPK1P53355 1430 aa22.13■■□□□ 1.13
APP-204ENST00000357903 UGGT2Q9NYU1 1516 aa22.13■■□□□ 1.13
APP-204ENST00000357903 EIF4G3O43432 1585 aaKnown RBP22.12■■□□□ 1.13
APP-204ENST00000357903 C11orf95C9JLR9 678 aaPredicted RBP22.11■■□□□ 1.13
APP-204ENST00000357903 SYNJ2O15056 1496 aa22.11■■□□□ 1.13
APP-204ENST00000357903 ABCC5O15440 1437 aa22.11■■□□□ 1.13
APP-204ENST00000357903 TROQ12816 1431 aaPredicted RBP22.11■■□□□ 1.13
APP-204ENST00000357903 DISP1Q96F81 1524 aa22.1■■□□□ 1.13
APP-204ENST00000357903 MIA2Q96PC5 1412 aa22.09■■□□□ 1.13
APP-204ENST00000357903 CHGAP10645 457 aaKnown RBP22.08■■□□□ 1.12
APP-204ENST00000357903 CCDC184Q52MB2 194 aa22.07■■□□□ 1.12
APP-204ENST00000357903 ARHGEF11O15085 1522 aa22.06■■□□□ 1.12
APP-204ENST00000357903 WDR62O43379 1518 aa22.05■■□□□ 1.12
APP-204ENST00000357903 CCER2I3L3R5 266 aa22.03■■□□□ 1.12
APP-204ENST00000357903 MAGI1Q96QZ7 1491 aaPredicted RBP22.03■■□□□ 1.12
APP-204ENST00000357903 ANKRD50Q9ULJ7 1429 aa22.02■■□□□ 1.12
APP-204ENST00000357903 KIAA0556O60303 1618 aa22.01■■□□□ 1.11
APP-204ENST00000357903 TMC1Q8TDI8 760 aa22.01■■□□□ 1.11
APP-204ENST00000357903 LRRIQ1Q96JM4 1722 aa22.01■■□□□ 1.11
APP-204ENST00000357903 KDM6BO15054 1643 aa21.99■■□□□ 1.11
APP-204ENST00000357903 KIF15Q9NS87 1388 aa21.99■■□□□ 1.11
APP-204ENST00000357903 ST20-MTHFSA0A0A6YYL1 179 aa21.98■■□□□ 1.11
APP-204ENST00000357903 CAMSAP2Q08AD1 1489 aa21.98■■□□□ 1.11
APP-204ENST00000357903 RAPGEF6Q8TEU7 1601 aa21.97■■□□□ 1.11
APP-204ENST00000357903 NPM1P06748 294 aaKnown RBP eCLIP21.96■■□□□ 1.11
APP-204ENST00000357903 KIF7Q2M1P5 1343 aa21.96■■□□□ 1.11
APP-204ENST00000357903 GPATCH8Q9UKJ3 1502 aaKnown RBP21.95■■□□□ 1.1
APP-204ENST00000357903 AFAP1Q8N556 730 aa21.95■■□□□ 1.1
APP-204ENST00000357903 ANKRD30BQ9BXX2 1392 aa21.95■■□□□ 1.1
APP-204ENST00000357903 CEP170Q5SW79 1584 aa21.94■■□□□ 1.1
APP-204ENST00000357903 NCOA1Q15788 1441 aa21.93■■□□□ 1.1
APP-204ENST00000357903 PRKRIP1Q9H875 184 aaPredicted RBP21.93■■□□□ 1.1
APP-204ENST00000357903 ATP10BO94823 1461 aa21.92■■□□□ 1.1
APP-204ENST00000357903 EFCAB2Q5VUJ9 269 aa21.92■■□□□ 1.1
APP-204ENST00000357903 C9orf84Q5VXU9 1444 aa21.91■■□□□ 1.1
APP-204ENST00000357903 CC2D1BQ5T0F9 858 aaKnown RBP21.9■■□□□ 1.1
APP-204ENST00000357903 USP47Q96K76 1375 aa21.89■■□□□ 1.1
APP-204ENST00000357903 CCDC7Q96M83 1385 aa21.89■■□□□ 1.09
APP-204ENST00000357903 AKNAQ7Z591 1439 aa21.88■■□□□ 1.09
APP-204ENST00000357903 TCOF1Q13428 1488 aaKnown RBP21.87■■□□□ 1.09
APP-204ENST00000357903 ROCK2O75116 1388 aaKnown RBP21.86■■□□□ 1.09
APP-204ENST00000357903 NBPF1Q3BBV0 1214 aa21.86■■□□□ 1.09
APP-204ENST00000357903 KIF14Q15058 1648 aa21.86■■□□□ 1.09
APP-204ENST00000357903 ROCK1Q13464 1354 aa21.85■■□□□ 1.09
APP-204ENST00000357903 KIF3BO15066 747 aa21.85■■□□□ 1.09
APP-204ENST00000357903 SPAG9O60271 1321 aaKnown RBP21.82■■□□□ 1.08
APP-204ENST00000357903 ARHGAP5Q13017 1502 aa21.82■■□□□ 1.08
APP-204ENST00000357903 KIAA1107Q9UPP5 1409 aa21.81■■□□□ 1.08
APP-204ENST00000357903 GGT6Q6P531 493 aa21.81■■□□□ 1.08
APP-204ENST00000357903 NUP160Q12769 1436 aa21.8■■□□□ 1.08
APP-204ENST00000357903 CCDC144AA2RUR9 1427 aa21.77■■□□□ 1.08
APP-204ENST00000357903 B4GALNT3Q6L9W6 998 aa21.77■■□□□ 1.08
APP-204ENST00000357903 RPRD2Q5VT52 1461 aaKnown RBP21.76■■□□□ 1.07
APP-204ENST00000357903 NUTM2DQ5VT03 806 aaPredicted RBP21.75■■□□□ 1.07
APP-204ENST00000357903 RSPH4AQ5TD94 716 aa21.75■■□□□ 1.07
APP-204ENST00000357903 DENND4BO75064 1496 aaPredicted RBP21.75■■□□□ 1.07
APP-204ENST00000357903 CNTLNQ9NXG0 1405 aa21.74■■□□□ 1.07
APP-204ENST00000357903 TSHZ2Q9NRE2 1034 aa21.73■■□□□ 1.07
APP-204ENST00000357903 PZPP20742 1482 aa21.69■■□□□ 1.06
APP-204ENST00000357903 DNMT1P26358 1616 aaKnown RBP21.68■■□□□ 1.06
APP-204ENST00000357903 PLPPR3Q6T4P5 718 aa21.67■■□□□ 1.06
APP-204ENST00000357903 ERICH6Q7L0X2 663 aa21.67■■□□□ 1.06
APP-204ENST00000357903 TNNT2P45379 298 aaPredicted RBP21.65■■□□□ 1.06
APP-204ENST00000357903 SAFB2Q14151 953 aaKnown RBP eCLIP21.64■■□□□ 1.05
APP-204ENST00000357903 PLEKHH2Q8IVE3 1493 aa21.64■■□□□ 1.05
APP-204ENST00000357903 PANK3Q9H999 370 aa21.63■■□□□ 1.05
APP-204ENST00000357903 CCDC141Q6ZP82 1450 aa21.62■■□□□ 1.05
APP-204ENST00000357903 ERCC6L2Q5T890 1561 aa21.61■■□□□ 1.05
APP-204ENST00000357903 TMF1P82094 1093 aa21.61■■□□□ 1.05
APP-204ENST00000357903 CYB5RLQ6IPT4 315 aa21.61■■□□□ 1.05
APP-204ENST00000357903 OSCARQ8IYS5 282 aa21.6■■□□□ 1.05
APP-204ENST00000357903 GCC2Q8IWJ2 1684 aa21.6■■□□□ 1.05
APP-204ENST00000357903 KNSTRNQ9Y448 316 aa21.59■■□□□ 1.05
APP-204ENST00000357903 SYCP2Q9BX26 1530 aa21.59■■□□□ 1.05
APP-204ENST00000357903 CCDC136Q96JN2 1154 aa21.59■■□□□ 1.05
APP-204ENST00000357903 SCAPERQ9BY12 1400 aa21.58■■□□□ 1.05
APP-204ENST00000357903 ITSN2Q9NZM3 1697 aa21.56■■□□□ 1.04
APP-204ENST00000357903 TEX14Q8IWB6 1497 aa21.55■■□□□ 1.04
APP-204ENST00000357903 MLECQ14165 292 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms