RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 KCNH8Q96L42 1107 aa14.96□□□□□ -0.01
CAPN3-205ENST00000357568 MYT1LQ9UL68 1186 aa14.96□□□□□ -0.01
CAPN3-205ENST00000357568 LRRC9Q6ZRR7 1453 aa14.96□□□□□ -0.01
CAPN3-205ENST00000357568 EPRSP07814 1512 aaKnown RBP14.96□□□□□ -0.02
CAPN3-205ENST00000357568 LRRIQ1Q96JM4 1722 aa14.96□□□□□ -0.02
CAPN3-205ENST00000357568 ERICH6BQ5W0A0 696 aa14.94□□□□□ -0.02
CAPN3-205ENST00000357568 ANP32CO43423 234 aa14.92□□□□□ -0.02
CAPN3-205ENST00000357568 DDX10Q13206 875 aaKnown RBP14.9□□□□□ -0.02
CAPN3-205ENST00000357568 BCANQ96GW7 911 aa14.9□□□□□ -0.02
CAPN3-205ENST00000357568 CDK13Q14004 1512 aaKnown RBP14.9□□□□□ -0.02
CAPN3-205ENST00000357568 ASXL2Q76L83 1435 aa14.88□□□□□ -0.03
CAPN3-205ENST00000357568 WDR7Q9Y4E6 1490 aa14.88□□□□□ -0.03
CAPN3-205ENST00000357568 ATP1B4Q9UN42 357 aaPredicted RBP14.88□□□□□ -0.03
CAPN3-205ENST00000357568 CDK11AQ9UQ88 783 aaPredicted RBP14.88□□□□□ -0.03
CAPN3-205ENST00000357568 ADRA2BP18089 450 aa14.87□□□□□ -0.03
CAPN3-205ENST00000357568 GLI2P10070 1586 aa14.86□□□□□ -0.03
CAPN3-205ENST00000357568 PHLDB1Q86UU1 1377 aa14.85□□□□□ -0.03
CAPN3-205ENST00000357568 PLEKHD1A6NEE1 506 aa14.84□□□□□ -0.03
CAPN3-205ENST00000357568 RTN4Q9NQC3 1192 aaKnown RBP14.84□□□□□ -0.03
CAPN3-205ENST00000357568 TROQ12816 1431 aaPredicted RBP14.84□□□□□ -0.03
CAPN3-205ENST00000357568 ABCC10Q5T3U5 1492 aa14.84□□□□□ -0.03
CAPN3-205ENST00000357568 EHBP1L1Q8N3D4 1523 aa14.83□□□□□ -0.04
CAPN3-205ENST00000357568 DIP2BQ9P265 1576 aa14.83□□□□□ -0.04
CAPN3-205ENST00000357568 ARID3CA6NKF2 412 aa14.81□□□□□ -0.04
CAPN3-205ENST00000357568 MSH5O43196 834 aa14.81□□□□□ -0.04
CAPN3-205ENST00000357568 KIF13AQ9H1H9 1805 aa14.8□□□□□ -0.04
CAPN3-205ENST00000357568 MAGI3Q5TCQ9 1506 aa14.8□□□□□ -0.04
CAPN3-205ENST00000357568 KIF14Q15058 1648 aa14.8□□□□□ -0.04
CAPN3-205ENST00000357568 ABCA9Q8IUA7 1624 aa14.79□□□□□ -0.04
CAPN3-205ENST00000357568 SIN3AQ96ST3 1273 aa14.79□□□□□ -0.04
CAPN3-205ENST00000357568 ITGAEP38570 1179 aa14.78□□□□□ -0.04
CAPN3-205ENST00000357568 MTUS2Q5JR59 1369 aa14.78□□□□□ -0.04
CAPN3-205ENST00000357568 MAP3K4Q9Y6R4 1608 aa14.77□□□□□ -0.05
CAPN3-205ENST00000357568 SUPT6HQ7KZ85 1726 aaKnown RBP14.76□□□□□ -0.05
CAPN3-205ENST00000357568 TONSLQ96HA7 1378 aa14.75□□□□□ -0.05
CAPN3-205ENST00000357568 TRIM52Q96A61 297 aa14.75□□□□□ -0.05
CAPN3-205ENST00000357568 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.75□□□□□ -0.05
CAPN3-205ENST00000357568 HFM1A2PYH4 1435 aa14.75□□□□□ -0.05
CAPN3-205ENST00000357568 ARAP3Q8WWN8 1544 aa14.73□□□□□ -0.05
CAPN3-205ENST00000357568 NCOA2Q15596 1464 aa14.73□□□□□ -0.05
CAPN3-205ENST00000357568 FAM69CQ0P6D2 419 aa14.72□□□□□ -0.05
CAPN3-205ENST00000357568 TTC37Q6PGP7 1564 aa14.72□□□□□ -0.05
CAPN3-205ENST00000357568 MYO5CQ9NQX4 1742 aa14.72□□□□□ -0.05
CAPN3-205ENST00000357568 PPP4R2Q9NY27 417 aa14.71□□□□□ -0.05
CAPN3-205ENST00000357568 PTPN23Q9H3S7 1636 aa14.71□□□□□ -0.05
CAPN3-205ENST00000357568 FGD6Q6ZV73 1430 aa14.7□□□□□ -0.06
CAPN3-205ENST00000357568 ITSN2Q9NZM3 1697 aa14.7□□□□□ -0.06
CAPN3-205ENST00000357568 FAM50AQ14320 339 aaKnown RBP14.69□□□□□ -0.06
CAPN3-205ENST00000357568 CD109Q6YHK3 1445 aa14.69□□□□□ -0.06
CAPN3-205ENST00000357568 CFAP74Q9C0B2 1584 aa14.69□□□□□ -0.06
CAPN3-205ENST00000357568 PREX2Q70Z35 1606 aa14.69□□□□□ -0.06
CAPN3-205ENST00000357568 PPRC1Q5VV67 1664 aaKnown RBP14.68□□□□□ -0.06
CAPN3-205ENST00000357568 CDC42BPAQ5VT25 1732 aa14.68□□□□□ -0.06
CAPN3-205ENST00000357568 TEX14Q8IWB6 1497 aa14.68□□□□□ -0.06
CAPN3-205ENST00000357568 PLCH2O75038 1416 aa14.67□□□□□ -0.06
CAPN3-205ENST00000357568 TRHP20396 242 aaPredicted RBP14.67□□□□□ -0.06
CAPN3-205ENST00000357568 CDC42BPBQ9Y5S2 1711 aa14.66□□□□□ -0.06
CAPN3-205ENST00000357568 GPATCH8Q9UKJ3 1502 aaKnown RBP14.65□□□□□ -0.06
CAPN3-205ENST00000357568 HNRNPUQ00839 825 aaKnown RBP eCLIP14.65□□□□□ -0.06
CAPN3-205ENST00000357568 NEO1Q92859 1461 aa14.64□□□□□ -0.07
CAPN3-205ENST00000357568 TSPOAP1O95153 1857 aa14.64□□□□□ -0.07
CAPN3-205ENST00000357568 CNTLNQ9NXG0 1405 aa14.64□□□□□ -0.07
CAPN3-205ENST00000357568 AKNAQ7Z591 1439 aa14.63□□□□□ -0.07
CAPN3-205ENST00000357568 NAIPQ13075 1403 aa14.62□□□□□ -0.07
CAPN3-205ENST00000357568 MYOM3Q5VTT5 1437 aa14.61□□□□□ -0.07
CAPN3-205ENST00000357568 MIA2Q96PC5 1412 aa14.61□□□□□ -0.07
CAPN3-205ENST00000357568 ARHGAP5Q13017 1502 aa14.61□□□□□ -0.07
CAPN3-205ENST00000357568 GCC2Q8IWJ2 1684 aa14.6□□□□□ -0.07
CAPN3-205ENST00000357568 ZBED9Q6R2W3 1325 aa14.6□□□□□ -0.07
CAPN3-205ENST00000357568 FANCAO15360 1455 aa14.6□□□□□ -0.07
CAPN3-205ENST00000357568 EFCAB2Q5VUJ9 269 aa14.59□□□□□ -0.07
CAPN3-205ENST00000357568 PLEKHH2Q8IVE3 1493 aa14.59□□□□□ -0.07
CAPN3-205ENST00000357568 POLR1AO95602 1720 aaPredicted RBP14.57□□□□□ -0.08
CAPN3-205ENST00000357568 HIRIP3Q9BW71 556 aaPredicted RBP14.57□□□□□ -0.08
CAPN3-205ENST00000357568 PTPRKQ15262 1439 aa14.56□□□□□ -0.08
CAPN3-205ENST00000357568 WASHC2AQ641Q2 1341 aa14.56□□□□□ -0.08
CAPN3-205ENST00000357568 SAMD9LQ8IVG5 1584 aa14.56□□□□□ -0.08
CAPN3-205ENST00000357568 CFDP1Q9UEE9 299 aaPredicted RBP14.56□□□□□ -0.08
CAPN3-205ENST00000357568 NCOA1Q15788 1441 aa14.56□□□□□ -0.08
CAPN3-205ENST00000357568 TCOF1Q13428 1488 aaKnown RBP14.56□□□□□ -0.08
CAPN3-205ENST00000357568 ABCC1P33527 1531 aa14.55□□□□□ -0.08
CAPN3-205ENST00000357568 KIAA1107Q9UPP5 1409 aa14.55□□□□□ -0.08
CAPN3-205ENST00000357568 DEKP35659 375 aaKnown RBP14.54□□□□□ -0.08
CAPN3-205ENST00000357568 NOP58Q9Y2X3 529 aaKnown RBP14.53□□□□□ -0.08
CAPN3-205ENST00000357568 ADGRL1O94910 1474 aa14.53□□□□□ -0.08
CAPN3-205ENST00000357568 CAMSAP2Q08AD1 1489 aa14.53□□□□□ -0.08
CAPN3-205ENST00000357568 EIF4G2P78344 907 aaKnown RBP eCLIP14.52□□□□□ -0.08
CAPN3-205ENST00000357568 HSPA5P11021 654 aaKnown RBP14.52□□□□□ -0.09
CAPN3-205ENST00000357568 ARHGEF5Q12774 1597 aa14.52□□□□□ -0.09
CAPN3-205ENST00000357568 SMG6Q86US8 1419 aaKnown RBP14.51□□□□□ -0.09
CAPN3-205ENST00000357568 KDM6BO15054 1643 aa14.51□□□□□ -0.09
CAPN3-205ENST00000357568 DENND4BO75064 1496 aaPredicted RBP14.5□□□□□ -0.09
CAPN3-205ENST00000357568 CCDC7Q96M83 1385 aa14.5□□□□□ -0.09
CAPN3-205ENST00000357568 RICTORQ6R327 1708 aa14.5□□□□□ -0.09
CAPN3-205ENST00000357568 RNF123Q5XPI4 1314 aa14.5□□□□□ -0.09
CAPN3-205ENST00000357568 PRKRIP1Q9H875 184 aaPredicted RBP14.49□□□□□ -0.09
CAPN3-205ENST00000357568 SCAPERQ9BY12 1400 aa14.49□□□□□ -0.09
CAPN3-205ENST00000357568 RSPH4AQ5TD94 716 aa14.49□□□□□ -0.09
CAPN3-205ENST00000357568 SYCP2Q9BX26 1530 aa14.49□□□□□ -0.09
CAPN3-205ENST00000357568 POGZQ7Z3K3 1410 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms