RNA–Protein interactions for RNA: ENST00000357508.5

C1orf228-201, Transcript of Uncharacterized protein C1orf228, humanhuman

TSL 1 (best)

Gene C1orf228, Length 2,113 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf228-201ENST00000357508 NEUROD1Q13562 356 aa37.76■■■■□ 3.64
C1orf228-201ENST00000357508 TIMELESSQ9UNS1 1208 aa37.76■■■■□ 3.64
C1orf228-201ENST00000357508 GPATCH8Q9UKJ3 1502 aaKnown RBP37.74■■■■□ 3.63
C1orf228-201ENST00000357508 ABCC5O15440 1437 aa37.73■■■■□ 3.63
C1orf228-201ENST00000357508 KDM5BQ9UGL1 1544 aa37.73■■■■□ 3.63
C1orf228-201ENST00000357508 ZNF644Q9H582 1327 aaPredicted RBP37.71■■■■□ 3.63
C1orf228-201ENST00000357508 CAMSAP2Q08AD1 1489 aa37.71■■■■□ 3.63
C1orf228-201ENST00000357508 ROCK1Q13464 1354 aa37.7■■■■□ 3.63
C1orf228-201ENST00000357508 ZCCHC11Q5TAX3 1644 aaKnown RBP37.69■■■■□ 3.62
C1orf228-201ENST00000357508 CDC42BPAQ5VT25 1732 aa37.68■■■■□ 3.62
C1orf228-201ENST00000357508 ABCC10Q5T3U5 1492 aa37.63■■■■□ 3.61
C1orf228-201ENST00000357508 CFDP1Q9UEE9 299 aaPredicted RBP37.63■■■■□ 3.61
C1orf228-201ENST00000357508 CROCC2H7BZ55 1655 aa37.62■■■■□ 3.61
C1orf228-201ENST00000357508 ADGBQ8N7X0 1667 aa37.61■■■■□ 3.61
C1orf228-201ENST00000357508 MIER1Q8N108 512 aa37.6■■■■□ 3.61
C1orf228-201ENST00000357508 DENND4BO75064 1496 aaPredicted RBP37.59■■■■□ 3.61
C1orf228-201ENST00000357508 PPP1R15AO75807 674 aaPredicted RBP37.53■■■■□ 3.6
C1orf228-201ENST00000357508 RIMBP3CA6NJZ7 1639 aa37.53■■■■□ 3.6
C1orf228-201ENST00000357508 RIMBP3BA6NNM3 1639 aa37.53■■■■□ 3.6
C1orf228-201ENST00000357508 RIMBP3Q9UFD9 1639 aa37.53■■■■□ 3.6
C1orf228-201ENST00000357508 TONSLQ96HA7 1378 aa37.51■■■■□ 3.6
C1orf228-201ENST00000357508 TRIM52Q96A61 297 aa37.51■■■■□ 3.59
C1orf228-201ENST00000357508 KCNH8Q96L42 1107 aa37.48■■■■□ 3.59
C1orf228-201ENST00000357508 ACIN1Q9UKV3 1341 aaKnown RBP37.47■■■■□ 3.59
C1orf228-201ENST00000357508 ADGRL2O95490 1459 aa37.47■■■■□ 3.59
C1orf228-201ENST00000357508 ZNF777Q9ULD5 760 aaPredicted RBP37.45■■■■□ 3.59
C1orf228-201ENST00000357508 CYB5RLQ6IPT4 315 aa37.45■■■■□ 3.59
C1orf228-201ENST00000357508 NCOA1Q15788 1441 aa37.42■■■■□ 3.58
C1orf228-201ENST00000357508 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.42■■■■□ 3.58
C1orf228-201ENST00000357508 MPHOSPH9Q99550 1183 aa37.42■■■■□ 3.58
C1orf228-201ENST00000357508 NPM1P06748 294 aaKnown RBP eCLIP37.4■■■■□ 3.58
C1orf228-201ENST00000357508 WDR7Q9Y4E6 1490 aa37.39■■■■□ 3.58
C1orf228-201ENST00000357508 TTC37Q6PGP7 1564 aa37.39■■■■□ 3.58
C1orf228-201ENST00000357508 PREX2Q70Z35 1606 aa37.38■■■■□ 3.57
C1orf228-201ENST00000357508 CDC42BPBQ9Y5S2 1711 aa37.38■■■■□ 3.57
C1orf228-201ENST00000357508 ASXL2Q76L83 1435 aa37.36■■■■□ 3.57
C1orf228-201ENST00000357508 SHANK2Q9UPX8 1470 aa37.35■■■■□ 3.57
C1orf228-201ENST00000357508 CENPBP07199 599 aaPredicted RBP37.31■■■■□ 3.56
C1orf228-201ENST00000357508 ANKRD30AQ9BXX3 1397 aa37.3■■■■□ 3.56
C1orf228-201ENST00000357508 ARHGEF5Q12774 1597 aa37.3■■■■□ 3.56
C1orf228-201ENST00000357508 SAMD9LQ8IVG5 1584 aa37.27■■■■□ 3.56
C1orf228-201ENST00000357508 C9orf84Q5VXU9 1444 aa37.24■■■■□ 3.55
C1orf228-201ENST00000357508 PZPP20742 1482 aa37.23■■■■□ 3.55
C1orf228-201ENST00000357508 ANKRD30BQ9BXX2 1392 aa37.21■■■■□ 3.55
C1orf228-201ENST00000357508 MYO5CQ9NQX4 1742 aa37.21■■■■□ 3.55
C1orf228-201ENST00000357508 MBD5Q9P267 1494 aa37.2■■■■□ 3.55
C1orf228-201ENST00000357508 FOXD1Q16676 465 aa37.19■■■■□ 3.54
C1orf228-201ENST00000357508 PLCH2O75038 1416 aa37.19■■■■□ 3.54
C1orf228-201ENST00000357508 ARHGAP5Q13017 1502 aa37.19■■■■□ 3.54
C1orf228-201ENST00000357508 SCAF1Q9H7N4 1312 aaKnown RBP37.17■■■■□ 3.54
C1orf228-201ENST00000357508 ANKRD50Q9ULJ7 1429 aa37.17■■■■□ 3.54
C1orf228-201ENST00000357508 SLC4A1APQ9BWU0 796 aaKnown RBP37.16■■■■□ 3.54
C1orf228-201ENST00000357508 RPRD2Q5VT52 1461 aaKnown RBP37.15■■■■□ 3.54
C1orf228-201ENST00000357508 YTHDC1Q96MU7 727 aaKnown RBP37.13■■■■□ 3.53
C1orf228-201ENST00000357508 CCDC141Q6ZP82 1450 aa37.12■■■■□ 3.53
C1orf228-201ENST00000357508 ABCA9Q8IUA7 1624 aa37.12■■■■□ 3.53
C1orf228-201ENST00000357508 HNRNPMP52272 730 aaKnown RBP eCLIP37.12■■■■□ 3.53
C1orf228-201ENST00000357508 TSPY4P0CV99 314 aa37.1■■■■□ 3.53
C1orf228-201ENST00000357508 TSPY10P0CW01 314 aa37.1■■■■□ 3.53
C1orf228-201ENST00000357508 EFCAB2Q5VUJ9 269 aa37.06■■■■□ 3.52
C1orf228-201ENST00000357508 SYCP2Q9BX26 1530 aa37.06■■■■□ 3.52
C1orf228-201ENST00000357508 HIRIP3Q9BW71 556 aaPredicted RBP37.05■■■■□ 3.52
C1orf228-201ENST00000357508 TEX14Q8IWB6 1497 aa37.04■■■■□ 3.52
C1orf228-201ENST00000357508 ARAP3Q8WWN8 1544 aa37.03■■■■□ 3.52
C1orf228-201ENST00000357508 MAST1Q9Y2H9 1570 aa37.02■■■■□ 3.52
C1orf228-201ENST00000357508 KDM5DQ9BY66 1539 aa37.02■■■■□ 3.52
C1orf228-201ENST00000357508 KIAA1107Q9UPP5 1409 aa37.02■■■■□ 3.52
C1orf228-201ENST00000357508 KIF15Q9NS87 1388 aa37.02■■■■□ 3.52
C1orf228-201ENST00000357508 RSPH4AQ5TD94 716 aa37.01■■■■□ 3.52
C1orf228-201ENST00000357508 L3MBTL2Q969R5 705 aa37.01■■■■□ 3.52
C1orf228-201ENST00000357508 DDX10Q13206 875 aaKnown RBP36.98■■■■□ 3.51
C1orf228-201ENST00000357508 PLEKHH2Q8IVE3 1493 aa36.97■■■■□ 3.51
C1orf228-201ENST00000357508 ARHGEF12Q9NZN5 1544 aa36.95■■■■□ 3.5
C1orf228-201ENST00000357508 FANCAO15360 1455 aa36.93■■■■□ 3.5
C1orf228-201ENST00000357508 CD109Q6YHK3 1445 aa36.91■■■■□ 3.5
C1orf228-201ENST00000357508 NUP155O75694 1391 aa36.9■■■■□ 3.5
C1orf228-201ENST00000357508 ABCC1P33527 1531 aa36.9■■■■□ 3.5
C1orf228-201ENST00000357508 PKD2Q13563 968 aa36.9■■■■□ 3.5
C1orf228-201ENST00000357508 PLXNC1O60486 1568 aa36.88■■■■□ 3.49
C1orf228-201ENST00000357508 TRAPPC8Q9Y2L5 1435 aa36.81■■■■□ 3.48
C1orf228-201ENST00000357508 UNC13BO14795 1591 aa36.79■■■■□ 3.48
C1orf228-201ENST00000357508 HSPA5P11021 654 aaKnown RBP36.79■■■■□ 3.48
C1orf228-201ENST00000357508 NBPF8Q3BBV2 869 aa36.78■■■■□ 3.48
C1orf228-201ENST00000357508 GLI2P10070 1586 aa36.77■■■■□ 3.48
C1orf228-201ENST00000357508 ADGRL1O94910 1474 aa36.76■■■■□ 3.48
C1orf228-201ENST00000357508 FAM135AQ9P2D6 1515 aa36.76■■■■□ 3.47
C1orf228-201ENST00000357508 EIF4G2P78344 907 aaKnown RBP eCLIP36.74■■■■□ 3.47
C1orf228-201ENST00000357508 FAM69CQ0P6D2 419 aa36.74■■■■□ 3.47
C1orf228-201ENST00000357508 GTF3C3Q9Y5Q9 886 aa36.74■■■■□ 3.47
C1orf228-201ENST00000357508 DIP2BQ9P265 1576 aa36.73■■■■□ 3.47
C1orf228-201ENST00000357508 AFAP1Q8N556 730 aa36.73■■■■□ 3.47
C1orf228-201ENST00000357508 SCAPERQ9BY12 1400 aa36.73■■■■□ 3.47
C1orf228-201ENST00000357508 MAP3K4Q9Y6R4 1608 aa36.72■■■■□ 3.47
C1orf228-201ENST00000357508 DUOX2Q9NRD8 1548 aa36.7■■■■□ 3.47
C1orf228-201ENST00000357508 CFAP74Q9C0B2 1584 aa36.66■■■■□ 3.46
C1orf228-201ENST00000357508 IQGAP3Q86VI3 1631 aa36.64■■■■□ 3.46
C1orf228-201ENST00000357508 SPAG9O60271 1321 aaKnown RBP36.63■■■■□ 3.45
C1orf228-201ENST00000357508 WASHC2AQ641Q2 1341 aa36.62■■■■□ 3.45
C1orf228-201ENST00000357508 POLR1AO95602 1720 aaPredicted RBP36.61■■■■□ 3.45
C1orf228-201ENST00000357508 NEO1Q92859 1461 aa36.61■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms