RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 ARXQ96QS3 562 aa15.13■□□□□ 0.01
COL9A1-202ENST00000357250 GGT6Q6P531 493 aa15.13■□□□□ 0.01
COL9A1-202ENST00000357250 ZRSR1Q15695 479 aaKnown RBP15.12■□□□□ 0.01
COL9A1-202ENST00000357250 SYNJ1O43426 1573 aa15.12■□□□□ 0.01
COL9A1-202ENST00000357250 TNNT2P45379 298 aaPredicted RBP15.12■□□□□ 0.01
COL9A1-202ENST00000357250 NOP58Q9Y2X3 529 aaKnown RBP15.11■□□□□ 0.01
COL9A1-202ENST00000357250 CC2D1BQ5T0F9 858 aaKnown RBP15.11■□□□□ 0.01
COL9A1-202ENST00000357250 AQRO60306 1485 aaKnown RBP eCLIP15.1■□□□□ 0.01
COL9A1-202ENST00000357250 NUP155O75694 1391 aa15.09■□□□□ 0.01
COL9A1-202ENST00000357250 NEUROD2Q15784 382 aa15.08■□□□□ 0
COL9A1-202ENST00000357250 L3MBTL2Q969R5 705 aa15.08■□□□□ 0
COL9A1-202ENST00000357250 KTN1Q86UP2 1357 aaKnown RBP15.08■□□□□ 0
COL9A1-202ENST00000357250 SAFB2Q14151 953 aaKnown RBP eCLIP15.08■□□□□ 0
COL9A1-202ENST00000357250 RALBP1Q15311 655 aa15.08■□□□□ 0
COL9A1-202ENST00000357250 ZBTB7CA1YPR0 619 aa15.07■□□□□ 0
COL9A1-202ENST00000357250 DHX57Q6P158 1386 aaKnown RBP15.07■□□□□ 0
COL9A1-202ENST00000357250 FRAT1Q92837 279 aaPredicted RBP15.07■□□□□ 0
COL9A1-202ENST00000357250 GAPVD1Q14C86 1478 aa15.07■□□□□ 0
COL9A1-202ENST00000357250 PTMAP06454 111 aaKnown RBP15.06■□□□□ 0
COL9A1-202ENST00000357250 RGS3P49796 1198 aa15.05■□□□□ 0
COL9A1-202ENST00000357250 ZNF644Q9H582 1327 aaPredicted RBP15.05■□□□□ 0
COL9A1-202ENST00000357250 ANKRD30AQ9BXX3 1397 aa15.05■□□□□ 0
COL9A1-202ENST00000357250 RSPH4AQ5TD94 716 aa15.04■□□□□ -0
COL9A1-202ENST00000357250 U2SURPO15042 1029 aaKnown RBP15.04■□□□□ -0
COL9A1-202ENST00000357250 LAS1LQ9Y4W2 734 aaKnown RBP15.04■□□□□ -0
COL9A1-202ENST00000357250 MORC1Q86VD1 984 aa15.03■□□□□ -0
COL9A1-202ENST00000357250 CFTRP13569 1480 aa15.02■□□□□ -0
COL9A1-202ENST00000357250 CALD1Q05682 793 aaKnown RBP15.02□□□□□ -0.01
COL9A1-202ENST00000357250 KIF21BO75037 1637 aa15.02□□□□□ -0.01
COL9A1-202ENST00000357250 HSP90AB1P08238 724 aaKnown RBP15.01□□□□□ -0.01
COL9A1-202ENST00000357250 IPO8O15397 1037 aaKnown RBP15.01□□□□□ -0.01
COL9A1-202ENST00000357250 EFCAB2Q5VUJ9 269 aa15.01□□□□□ -0.01
COL9A1-202ENST00000357250 BICRAQ9NZM4 1560 aa15.01□□□□□ -0.01
COL9A1-202ENST00000357250 ROCK2O75116 1388 aaKnown RBP15.01□□□□□ -0.01
COL9A1-202ENST00000357250 CHMP4AQ9BY43 222 aa15.01□□□□□ -0.01
COL9A1-202ENST00000357250 B4GALNT3Q6L9W6 998 aa15□□□□□ -0.01
COL9A1-202ENST00000357250 ARAP1Q96P48 1450 aa15□□□□□ -0.01
COL9A1-202ENST00000357250 PHLDB1Q86UU1 1377 aa15□□□□□ -0.01
COL9A1-202ENST00000357250 KIF3BO15066 747 aa15□□□□□ -0.01
COL9A1-202ENST00000357250 HSCBQ8IWL3 235 aa15□□□□□ -0.01
COL9A1-202ENST00000357250 A0A0G2JS52 829 aa14.99□□□□□ -0.01
COL9A1-202ENST00000357250 EIF3AQ14152 1382 aaKnown RBP14.99□□□□□ -0.01
COL9A1-202ENST00000357250 NUTM2DQ5VT03 806 aaPredicted RBP14.98□□□□□ -0.01
COL9A1-202ENST00000357250 NRDCO43847 1150 aa14.98□□□□□ -0.01
COL9A1-202ENST00000357250 MCCP23508 829 aa14.98□□□□□ -0.01
COL9A1-202ENST00000357250 GOLGA6L6A8MZA4 724 aa14.98□□□□□ -0.01
COL9A1-202ENST00000357250 TRHP20396 242 aaPredicted RBP14.98□□□□□ -0.01
COL9A1-202ENST00000357250 PTMSP20962 102 aa14.97□□□□□ -0.01
COL9A1-202ENST00000357250 L1TD1Q5T7N2 865 aaKnown RBP14.97□□□□□ -0.01
COL9A1-202ENST00000357250 HDGFL2Q7Z4V5 671 aaPredicted RBP14.97□□□□□ -0.01
COL9A1-202ENST00000357250 SRPK2P78362 688 aaKnown RBP14.97□□□□□ -0.01
COL9A1-202ENST00000357250 STK26Q9P289 416 aa14.97□□□□□ -0.01
COL9A1-202ENST00000357250 TCERG1O14776 1098 aaKnown RBP14.96□□□□□ -0.01
COL9A1-202ENST00000357250 PDE3BQ13370 1112 aa14.96□□□□□ -0.01
COL9A1-202ENST00000357250 OS9Q13438 667 aaPredicted RBP14.96□□□□□ -0.01
COL9A1-202ENST00000357250 CC2D2AQ9P2K1 1620 aa14.96□□□□□ -0.01
COL9A1-202ENST00000357250 CUX1P39880 1505 aa14.96□□□□□ -0.02
COL9A1-202ENST00000357250 CCDC18Q5T9S5 1454 aa14.95□□□□□ -0.02
COL9A1-202ENST00000357250 DNTTIP2Q5QJE6 756 aaKnown RBP14.95□□□□□ -0.02
COL9A1-202ENST00000357250 PTPRGP23470 1445 aa14.94□□□□□ -0.02
COL9A1-202ENST00000357250 RCAN3Q9UKA8 241 aa14.94□□□□□ -0.02
COL9A1-202ENST00000357250 KCNJ4P48050 445 aa14.93□□□□□ -0.02
COL9A1-202ENST00000357250 FGD1P98174 961 aa14.92□□□□□ -0.02
COL9A1-202ENST00000357250 RWDD1Q9H446 243 aaPredicted RBP14.92□□□□□ -0.02
COL9A1-202ENST00000357250 SOX12O15370 315 aa14.92□□□□□ -0.02
COL9A1-202ENST00000357250 SPAG9O60271 1321 aaKnown RBP14.91□□□□□ -0.02
COL9A1-202ENST00000357250 RTF1Q92541 710 aaKnown RBP14.9□□□□□ -0.02
COL9A1-202ENST00000357250 NLRP13Q86W25 1043 aa14.9□□□□□ -0.02
COL9A1-202ENST00000357250 CYB5RLQ6IPT4 315 aa14.9□□□□□ -0.02
COL9A1-202ENST00000357250 RBM19Q9Y4C8 960 aaKnown RBP14.9□□□□□ -0.02
COL9A1-202ENST00000357250 GOLGA6L4A6NEF3 574 aa14.89□□□□□ -0.03
COL9A1-202ENST00000357250 PMFBP1Q8TBY8 1022 aa14.88□□□□□ -0.03
COL9A1-202ENST00000357250 LMOD2Q6P5Q4 547 aa14.88□□□□□ -0.03
COL9A1-202ENST00000357250 HDAC5Q9UQL6 1122 aa14.88□□□□□ -0.03
COL9A1-202ENST00000357250 PRXQ9BXM0 1461 aa14.88□□□□□ -0.03
COL9A1-202ENST00000357250 POLA1P09884 1462 aaPredicted RBP14.88□□□□□ -0.03
COL9A1-202ENST00000357250 TOPBP1Q92547 1522 aa14.86□□□□□ -0.03
COL9A1-202ENST00000357250 LRRC9Q6ZRR7 1453 aa14.85□□□□□ -0.03
COL9A1-202ENST00000357250 GBP4Q96PP9 640 aa14.85□□□□□ -0.03
COL9A1-202ENST00000357250 ST20-MTHFSA0A0A6YYL1 179 aa14.85□□□□□ -0.03
COL9A1-202ENST00000357250 FGD6Q6ZV73 1430 aa14.85□□□□□ -0.03
COL9A1-202ENST00000357250 NAP1L5Q96NT1 182 aaPredicted RBP14.85□□□□□ -0.03
COL9A1-202ENST00000357250 TERF2IPQ9NYB0 399 aa14.85□□□□□ -0.03
COL9A1-202ENST00000357250 U2AF1L5P0DN76 240 aaPredicted RBP14.84□□□□□ -0.03
COL9A1-202ENST00000357250 U2AF1Q01081 240 aaKnown RBP eCLIP14.84□□□□□ -0.03
COL9A1-202ENST00000357250 TOP2BQ02880 1626 aa14.84□□□□□ -0.03
COL9A1-202ENST00000357250 GOLGA2Q08379 1002 aa14.84□□□□□ -0.03
COL9A1-202ENST00000357250 CHAF1AQ13111 956 aaPredicted RBP14.84□□□□□ -0.03
COL9A1-202ENST00000357250 KIF15Q9NS87 1388 aa14.82□□□□□ -0.04
COL9A1-202ENST00000357250 HMGXB3Q12766 1538 aa14.82□□□□□ -0.04
COL9A1-202ENST00000357250 LMOD3Q0VAK6 560 aa14.81□□□□□ -0.04
COL9A1-202ENST00000357250 KIAA1211Q6ZU35 1233 aa14.81□□□□□ -0.04
COL9A1-202ENST00000357250 WASHC2CQ9Y4E1 1318 aa14.8□□□□□ -0.04
COL9A1-202ENST00000357250 MSNP26038 577 aaKnown RBP14.8□□□□□ -0.04
COL9A1-202ENST00000357250 PLCB2Q00722 1185 aa14.8□□□□□ -0.04
COL9A1-202ENST00000357250 UACAQ9BZF9 1416 aa14.8□□□□□ -0.04
COL9A1-202ENST00000357250 MYOM3Q5VTT5 1437 aa14.8□□□□□ -0.04
COL9A1-202ENST00000357250 HTATSF1O43719 755 aaKnown RBP14.79□□□□□ -0.04
COL9A1-202ENST00000357250 HMMRO75330 724 aa14.79□□□□□ -0.04
COL9A1-202ENST00000357250 NGEFQ8N5V2 710 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms