RNA–Protein interactions for RNA: ENST00000356770.8

PBRM1-203, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 7,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-203ENST00000356770 CCDC34Q96HJ3 373 aa10.48□□□□□ -0.73
PBRM1-203ENST00000356770 PATL2C9JE40 543 aaKnown RBP10.48□□□□□ -0.73
PBRM1-203ENST00000356770 MARCH6O60337 910 aa10.48□□□□□ -0.73
PBRM1-203ENST00000356770 HTATSF1O43719 755 aaKnown RBP10.47□□□□□ -0.73
PBRM1-203ENST00000356770 CALRP27797 417 aaKnown RBP10.47□□□□□ -0.73
PBRM1-203ENST00000356770 APBB1O00213 710 aa10.47□□□□□ -0.73
PBRM1-203ENST00000356770 TAF7LQ5H9L4 462 aa10.47□□□□□ -0.73
PBRM1-203ENST00000356770 CHMP3Q9Y3E7 222 aa10.47□□□□□ -0.73
PBRM1-203ENST00000356770 SUPT16HQ9Y5B9 1047 aaKnown RBP10.47□□□□□ -0.73
PBRM1-203ENST00000356770 ERCC6Q03468 1493 aa10.46□□□□□ -0.74
PBRM1-203ENST00000356770 CFAP44Q96MT7 982 aa10.46□□□□□ -0.74
PBRM1-203ENST00000356770 CC2D1BQ5T0F9 858 aaKnown RBP10.45□□□□□ -0.74
PBRM1-203ENST00000356770 PES1O00541 588 aaKnown RBP10.45□□□□□ -0.74
PBRM1-203ENST00000356770 NOP58Q9Y2X3 529 aaKnown RBP10.45□□□□□ -0.74
PBRM1-203ENST00000356770 PAK3O75914 559 aaPredicted RBP10.44□□□□□ -0.74
PBRM1-203ENST00000356770 TPM3P06753 285 aa10.44□□□□□ -0.74
PBRM1-203ENST00000356770 CSB-PGBD3P0DP91 1061 aa10.43□□□□□ -0.74
PBRM1-203ENST00000356770 PHF23Q9BUL5 403 aaPredicted RBP10.43□□□□□ -0.74
PBRM1-203ENST00000356770 DCAF8L1A6NGE4 600 aa10.43□□□□□ -0.74
PBRM1-203ENST00000356770 TCEAL9Q9UHQ7 104 aa10.43□□□□□ -0.74
PBRM1-203ENST00000356770 SCRIBQ14160 1630 aa10.43□□□□□ -0.74
PBRM1-203ENST00000356770 CARD11Q9BXL7 1154 aa10.43□□□□□ -0.74
PBRM1-203ENST00000356770 FRAT2O75474 233 aaPredicted RBP10.42□□□□□ -0.74
PBRM1-203ENST00000356770 SYAP1Q96A49 352 aaPredicted RBP10.42□□□□□ -0.74
PBRM1-203ENST00000356770 GPATCH3Q96I76 525 aa10.41□□□□□ -0.74
PBRM1-203ENST00000356770 TPD52L1Q16890 204 aaPredicted RBP10.41□□□□□ -0.74
PBRM1-203ENST00000356770 SRPK2P78362 688 aaKnown RBP10.4□□□□□ -0.74
PBRM1-203ENST00000356770 PTMSP20962 102 aa10.4□□□□□ -0.74
PBRM1-203ENST00000356770 TSR1Q2NL82 804 aaKnown RBP10.4□□□□□ -0.74
PBRM1-203ENST00000356770 GZF1Q9H116 711 aaPredicted RBP10.4□□□□□ -0.74
PBRM1-203ENST00000356770 RRP12Q5JTH9 1297 aaKnown RBP10.39□□□□□ -0.75
PBRM1-203ENST00000356770 MIER1Q8N108 512 aa10.39□□□□□ -0.75
PBRM1-203ENST00000356770 GBP4Q96PP9 640 aa10.39□□□□□ -0.75
PBRM1-203ENST00000356770 HDGFP51858 240 aaKnown RBP10.39□□□□□ -0.75
PBRM1-203ENST00000356770 PLEKHD1A6NEE1 506 aa10.39□□□□□ -0.75
PBRM1-203ENST00000356770 CTDP1Q9Y5B0 961 aaPredicted RBP10.38□□□□□ -0.75
PBRM1-203ENST00000356770 TOMM22Q9NS69 142 aa10.38□□□□□ -0.75
PBRM1-203ENST00000356770 TRIM6-TRIM34B2RNG4 842 aa10.37□□□□□ -0.75
PBRM1-203ENST00000356770 GTF2E1P29083 439 aaPredicted RBP10.37□□□□□ -0.75
PBRM1-203ENST00000356770 CSPP1Q1MSJ5 1256 aa10.37□□□□□ -0.75
PBRM1-203ENST00000356770 B4GALNT3Q6L9W6 998 aa10.37□□□□□ -0.75
PBRM1-203ENST00000356770 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.37□□□□□ -0.752e-6■■■■■ 127.4
PBRM1-203ENST00000356770 MEX3CQ5U5Q3 659 aaKnown RBP10.36□□□□□ -0.75
PBRM1-203ENST00000356770 CWC22Q9HCG8 908 aaKnown RBP10.36□□□□□ -0.75
PBRM1-203ENST00000356770 TPM2P07951 284 aa10.36□□□□□ -0.75
PBRM1-203ENST00000356770 SAFB2Q14151 953 aaKnown RBP eCLIP10.36□□□□□ -0.75
PBRM1-203ENST00000356770 CCAR2Q8N163 923 aaKnown RBP10.36□□□□□ -0.75
PBRM1-203ENST00000356770 TRIM34Q9BYJ4 488 aa10.35□□□□□ -0.75
PBRM1-203ENST00000356770 RAD21O60216 631 aa10.35□□□□□ -0.75
PBRM1-203ENST00000356770 MSH5O43196 834 aa10.35□□□□□ -0.75
PBRM1-203ENST00000356770 SF3A1Q15459 793 aaKnown RBP10.35□□□□□ -0.75
PBRM1-203ENST00000356770 CCDC70Q6NSX1 233 aa10.35□□□□□ -0.75
PBRM1-203ENST00000356770 PPP4R2Q9NY27 417 aa10.35□□□□□ -0.75
PBRM1-203ENST00000356770 IPO8O15397 1037 aaKnown RBP10.33□□□□□ -0.76
PBRM1-203ENST00000356770 MORC1Q86VD1 984 aa10.33□□□□□ -0.76
PBRM1-203ENST00000356770 KLHL34Q8N239 644 aa10.32□□□□□ -0.76
PBRM1-203ENST00000356770 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.32□□□□□ -0.76
PBRM1-203ENST00000356770 PCMTD1Q96MG8 357 aaPredicted RBP10.31□□□□□ -0.76
PBRM1-203ENST00000356770 STK26Q9P289 416 aa10.31□□□□□ -0.76
PBRM1-203ENST00000356770 TPM1P09493 284 aa10.31□□□□□ -0.76
PBRM1-203ENST00000356770 AKAP17AQ02040 695 aaKnown RBP10.31□□□□□ -0.76
PBRM1-203ENST00000356770 NOL8Q76FK4 1167 aaKnown RBP10.31□□□□□ -0.76
PBRM1-203ENST00000356770 PHF14O94880 888 aa10.31□□□□□ -0.76
PBRM1-203ENST00000356770 ITPRIPQ8IWB1 547 aa10.3□□□□□ -0.76
PBRM1-203ENST00000356770 TMF1P82094 1093 aa10.3□□□□□ -0.76
PBRM1-203ENST00000356770 CFDP1Q9UEE9 299 aaPredicted RBP10.29□□□□□ -0.76
PBRM1-203ENST00000356770 SPAG9O60271 1321 aaKnown RBP10.29□□□□□ -0.76
PBRM1-203ENST00000356770 H3BQV1 296 aa10.29□□□□□ -0.76
PBRM1-203ENST00000356770 IFFO2Q5TF58 517 aa10.29□□□□□ -0.76
PBRM1-203ENST00000356770 RSF1Q96T23 1441 aaPredicted RBP10.29□□□□□ -0.76
PBRM1-203ENST00000356770 CALD1Q05682 793 aaKnown RBP10.29□□□□□ -0.76
PBRM1-203ENST00000356770 KANK1Q14678 1352 aa10.29□□□□□ -0.76
PBRM1-203ENST00000356770 ODF2Q5BJF6 829 aa10.29□□□□□ -0.76
PBRM1-203ENST00000356770 DEKP35659 375 aaKnown RBP10.28□□□□□ -0.76
PBRM1-203ENST00000356770 HDGFL2Q7Z4V5 671 aaPredicted RBP10.28□□□□□ -0.76
PBRM1-203ENST00000356770 KIF16BQ96L93 1317 aa10.28□□□□□ -0.76
PBRM1-203ENST00000356770 GPS2Q13227 327 aa10.28□□□□□ -0.76
PBRM1-203ENST00000356770 NOL10Q9BSC4 688 aaKnown RBP10.28□□□□□ -0.76
PBRM1-203ENST00000356770 STK31Q9BXU1 1019 aa10.28□□□□□ -0.76
PBRM1-203ENST00000356770 AMOTL1Q8IY63 956 aa10.27□□□□□ -0.76
PBRM1-203ENST00000356770 KIF3AQ9Y496 699 aa10.27□□□□□ -0.76
PBRM1-203ENST00000356770 SLKQ9H2G2 1235 aaPredicted RBP10.27□□□□□ -0.76
PBRM1-203ENST00000356770 GOLGA6L19H0YKK7 550 aa10.27□□□□□ -0.77
PBRM1-203ENST00000356770 CCDC43Q96MW1 224 aaKnown RBP10.27□□□□□ -0.77
PBRM1-203ENST00000356770 SLC4A10Q6U841 1118 aa10.26□□□□□ -0.77
PBRM1-203ENST00000356770 CHMP4AQ9BY43 222 aa10.26□□□□□ -0.77
PBRM1-203ENST00000356770 FOXD4L5Q5VV16 416 aaPredicted RBP10.26□□□□□ -0.77
PBRM1-203ENST00000356770 FOXD4L4Q8WXT5 416 aaPredicted RBP10.26□□□□□ -0.77
PBRM1-203ENST00000356770 FBXW7Q969H0 707 aa10.26□□□□□ -0.77
PBRM1-203ENST00000356770 HDAC5Q9UQL6 1122 aa10.26□□□□□ -0.77
PBRM1-203ENST00000356770 FOXD4L1Q9NU39 408 aa10.26□□□□□ -0.77
PBRM1-203ENST00000356770 PAF1Q8N7H5 531 aa10.25□□□□□ -0.77
PBRM1-203ENST00000356770 CT47A1Q5JQC4 288 aaPredicted RBP10.25□□□□□ -0.77
PBRM1-203ENST00000356770 FAM184AQ8NB25 1140 aa10.25□□□□□ -0.77
PBRM1-203ENST00000356770 MFAP1P55081 439 aaKnown RBP10.25□□□□□ -0.77
PBRM1-203ENST00000356770 GOLGA6L3A6NEY3 463 aa10.24□□□□□ -0.77
PBRM1-203ENST00000356770 SYNE3Q6ZMZ3 975 aa10.24□□□□□ -0.77
PBRM1-203ENST00000356770 SAMD1Q6SPF0 538 aaPredicted RBP10.24□□□□□ -0.77
PBRM1-203ENST00000356770 R3HCC1Q9Y3T6 440 aaKnown RBP10.24□□□□□ -0.77
PBRM1-203ENST00000356770 IPO7O95373 1038 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms