RNA–Protein interactions for RNA: ENST00000355653.7

VAT1-201, Transcript of vesicle amine transport 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-201ENST00000355653 ANP32AP39687 249 aaKnown RBP20.69■□□□□ 0.9
VAT1-201ENST00000355653 POLR3GLQ9BT43 218 aa20.69■□□□□ 0.9
VAT1-201ENST00000355653 KIF7Q2M1P5 1343 aa20.69■□□□□ 0.9
VAT1-201ENST00000355653 SAMD9Q5K651 1589 aa20.68■□□□□ 0.9
VAT1-201ENST00000355653 KDM6BO15054 1643 aa20.68■□□□□ 0.9
VAT1-201ENST00000355653 NBPF8Q3BBV2 869 aa20.68■□□□□ 0.9
VAT1-201ENST00000355653 HECW1Q76N89 1606 aa20.67■□□□□ 0.9
VAT1-201ENST00000355653 ABCA5Q8WWZ7 1642 aa20.67■□□□□ 0.9
VAT1-201ENST00000355653 LAMC3Q9Y6N6 1575 aa20.67■□□□□ 0.9
VAT1-201ENST00000355653 EHBP1L1Q8N3D4 1523 aa20.66■□□□□ 0.9
VAT1-201ENST00000355653 RTL5Q5HYW3 569 aaPredicted RBP20.64■□□□□ 0.89
VAT1-201ENST00000355653 IPO9Q96P70 1041 aaKnown RBP20.63■□□□□ 0.89
VAT1-201ENST00000355653 PDS5BQ9NTI5 1447 aa20.63■□□□□ 0.89
VAT1-201ENST00000355653 UGGT2Q9NYU1 1516 aa20.63■□□□□ 0.89
VAT1-201ENST00000355653 MAGI3Q5TCQ9 1506 aa20.62■□□□□ 0.89
VAT1-201ENST00000355653 ZBTB47Q9UFB7 747 aaPredicted RBP20.62■□□□□ 0.89
VAT1-201ENST00000355653 NUDCQ9Y266 331 aa20.62■□□□□ 0.89
VAT1-201ENST00000355653 SMG6Q86US8 1419 aaKnown RBP20.62■□□□□ 0.89
VAT1-201ENST00000355653 GCC2Q8IWJ2 1684 aa20.62■□□□□ 0.89
VAT1-201ENST00000355653 ZNF326Q5BKZ1 582 aaKnown RBP20.56■□□□□ 0.88
VAT1-201ENST00000355653 NPM2Q86SE8 214 aaKnown RBP20.55■□□□□ 0.88
VAT1-201ENST00000355653 TCOF1Q13428 1488 aaKnown RBP20.54■□□□□ 0.88
VAT1-201ENST00000355653 ARHGEF11O15085 1522 aa20.54■□□□□ 0.88
VAT1-201ENST00000355653 THOC2Q8NI27 1593 aaKnown RBP20.54■□□□□ 0.88
VAT1-201ENST00000355653 SLC4A1APQ9BWU0 796 aaKnown RBP20.54■□□□□ 0.88
VAT1-201ENST00000355653 RPRD2Q5VT52 1461 aaKnown RBP20.53■□□□□ 0.88
VAT1-201ENST00000355653 ANKRD30BQ9BXX2 1392 aa20.53■□□□□ 0.88
VAT1-201ENST00000355653 SPATA31E1Q6ZUB1 1445 aa20.53■□□□□ 0.88
VAT1-201ENST00000355653 TEX14Q8IWB6 1497 aa20.52■□□□□ 0.88
VAT1-201ENST00000355653 KIF21AQ7Z4S6 1674 aa20.5■□□□□ 0.87
VAT1-201ENST00000355653 RNF123Q5XPI4 1314 aa20.5■□□□□ 0.87
VAT1-201ENST00000355653 CDK13Q14004 1512 aaKnown RBP20.5■□□□□ 0.87
VAT1-201ENST00000355653 TARBP1Q13395 1621 aaKnown RBP20.49■□□□□ 0.87
VAT1-201ENST00000355653 DHX29Q7Z478 1369 aaKnown RBP20.49■□□□□ 0.87
VAT1-201ENST00000355653 EPRSP07814 1512 aaKnown RBP20.49■□□□□ 0.87
VAT1-201ENST00000355653 TMC1Q8TDI8 760 aa20.47■□□□□ 0.87
VAT1-201ENST00000355653 POLR1AO95602 1720 aaPredicted RBP20.45■□□□□ 0.86
VAT1-201ENST00000355653 ANO8Q9HCE9 1232 aaPredicted RBP20.45■□□□□ 0.86
VAT1-201ENST00000355653 LAS1LQ9Y4W2 734 aaKnown RBP20.44■□□□□ 0.86
VAT1-201ENST00000355653 IQGAP2Q13576 1575 aa20.43■□□□□ 0.86
VAT1-201ENST00000355653 USP47Q96K76 1375 aa20.43■□□□□ 0.86
VAT1-201ENST00000355653 PNISRQ8TF01 805 aaKnown RBP20.43■□□□□ 0.86
VAT1-201ENST00000355653 ZNF644Q9H582 1327 aaPredicted RBP20.43■□□□□ 0.86
VAT1-201ENST00000355653 MIA2Q96PC5 1412 aa20.43■□□□□ 0.86
VAT1-201ENST00000355653 IL27Q8NEV9 243 aa20.42■□□□□ 0.86
VAT1-201ENST00000355653 RTN4Q9NQC3 1192 aaKnown RBP20.42■□□□□ 0.86
VAT1-201ENST00000355653 SALL2Q9Y467 1007 aaPredicted RBP20.42■□□□□ 0.86
VAT1-201ENST00000355653 EXOC6Q8TAG9 804 aa20.4■□□□□ 0.86
VAT1-201ENST00000355653 DAPK1P53355 1430 aa20.4■□□□□ 0.86
VAT1-201ENST00000355653 NEFMP07197 916 aa20.38■□□□□ 0.85
VAT1-201ENST00000355653 BCORL1Q5H9F3 1711 aa20.38■□□□□ 0.85
VAT1-201ENST00000355653 PBRM1Q86U86 1689 aa20.37■□□□□ 0.85
VAT1-201ENST00000355653 RRP1P56182 461 aaKnown RBP20.37■□□□□ 0.85
VAT1-201ENST00000355653 WDR62O43379 1518 aa20.36■□□□□ 0.85
VAT1-201ENST00000355653 ADAMTS12P58397 1594 aa20.35■□□□□ 0.85
VAT1-201ENST00000355653 ABCC5O15440 1437 aa20.35■□□□□ 0.85
VAT1-201ENST00000355653 PDE4AP27815 886 aa20.34■□□□□ 0.85
VAT1-201ENST00000355653 ROCK1Q13464 1354 aa20.34■□□□□ 0.85
VAT1-201ENST00000355653 ZNF608Q9ULD9 1512 aaPredicted RBP20.33■□□□□ 0.85
VAT1-201ENST00000355653 TCERG1O14776 1098 aaKnown RBP20.33■□□□□ 0.84
VAT1-201ENST00000355653 RCAN3Q9UKA8 241 aa20.31■□□□□ 0.84
VAT1-201ENST00000355653 CARD11Q9BXL7 1154 aa20.29■□□□□ 0.84
VAT1-201ENST00000355653 MRC2Q9UBG0 1479 aa20.28■□□□□ 0.84
VAT1-201ENST00000355653 PKD2Q13563 968 aa20.28■□□□□ 0.84
VAT1-201ENST00000355653 DNMT1P26358 1616 aaKnown RBP20.28■□□□□ 0.84
VAT1-201ENST00000355653 PZPP20742 1482 aa20.27■□□□□ 0.84
VAT1-201ENST00000355653 BACH2Q9BYV9 841 aa20.27■□□□□ 0.84
VAT1-201ENST00000355653 KIF15Q9NS87 1388 aa20.27■□□□□ 0.84
VAT1-201ENST00000355653 MBD5Q9P267 1494 aa20.26■□□□□ 0.83
VAT1-201ENST00000355653 DISP1Q96F81 1524 aa20.26■□□□□ 0.83
VAT1-201ENST00000355653 ARID4BQ4LE39 1312 aaPredicted RBP20.26■□□□□ 0.83
VAT1-201ENST00000355653 MYBBP1AQ9BQG0 1328 aaKnown RBP20.26■□□□□ 0.83
VAT1-201ENST00000355653 SKAP1Q86WV1 359 aa20.26■□□□□ 0.83
VAT1-201ENST00000355653 ZNF777Q9ULD5 760 aaPredicted RBP20.26■□□□□ 0.83
VAT1-201ENST00000355653 NUP153P49790 1475 aaKnown RBP20.25■□□□□ 0.83
VAT1-201ENST00000355653 KDM5CP41229 1560 aa20.25■□□□□ 0.83
VAT1-201ENST00000355653 ROCK2O75116 1388 aaKnown RBP20.25■□□□□ 0.83
VAT1-201ENST00000355653 LRPPRCP42704 1394 aaKnown RBP20.25■□□□□ 0.83
VAT1-201ENST00000355653 KDM2AQ9Y2K7 1162 aa20.25■□□□□ 0.83
VAT1-201ENST00000355653 KIF14Q15058 1648 aa20.23■□□□□ 0.83
VAT1-201ENST00000355653 ST20-MTHFSA0A0A6YYL1 179 aa20.23■□□□□ 0.83
VAT1-201ENST00000355653 KIAA1107Q9UPP5 1409 aa20.23■□□□□ 0.83
VAT1-201ENST00000355653 KIAA0586Q9BVV6 1533 aa20.23■□□□□ 0.83
VAT1-201ENST00000355653 PLIN1O60240 522 aa20.23■□□□□ 0.83
VAT1-201ENST00000355653 USP35Q9P2H5 1018 aa20.23■□□□□ 0.83
VAT1-201ENST00000355653 BRD4O60885 1362 aaPredicted RBP20.23■□□□□ 0.83
VAT1-201ENST00000355653 PRG4Q92954 1404 aaPredicted RBP20.22■□□□□ 0.83
VAT1-201ENST00000355653 CFDP1Q9UEE9 299 aaPredicted RBP20.22■□□□□ 0.83
VAT1-201ENST00000355653 CDCA7LQ96GN5 454 aa20.21■□□□□ 0.83
VAT1-201ENST00000355653 PPM1GO15355 546 aaPredicted RBP20.2■□□□□ 0.82
VAT1-201ENST00000355653 KIAA0556O60303 1618 aa20.2■□□□□ 0.82
VAT1-201ENST00000355653 RALBP1Q15311 655 aa20.2■□□□□ 0.82
VAT1-201ENST00000355653 MS4A1P11836 297 aa20.19■□□□□ 0.82
VAT1-201ENST00000355653 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.19■□□□□ 0.82
VAT1-201ENST00000355653 IFT140Q96RY7 1462 aa20.18■□□□□ 0.82
VAT1-201ENST00000355653 FBLN2P98095 1184 aa20.18■□□□□ 0.82
VAT1-201ENST00000355653 RAPGEF6Q8TEU7 1601 aa20.15■□□□□ 0.82
VAT1-201ENST00000355653 GRIN2AQ12879 1464 aa20.14■□□□□ 0.81
VAT1-201ENST00000355653 SLC4A3P48751 1232 aa20.14■□□□□ 0.81
VAT1-201ENST00000355653 CHMP7Q8WUX9 453 aaPredicted RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms