RNA–Protein interactions for RNA: ENST00000355648.8

PHACTR3-201, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-201ENST00000355648 CLCN1P35523 988 aa14.35□□□□□ -0.11
PHACTR3-201ENST00000355648 HNRNPUL2Q1KMD3 747 aaKnown RBP14.35□□□□□ -0.11
PHACTR3-201ENST00000355648 DCAF11Q8TEB1 546 aa14.35□□□□□ -0.11
PHACTR3-201ENST00000355648 ANP32CO43423 234 aa14.34□□□□□ -0.11
PHACTR3-201ENST00000355648 CHMP4BQ9H444 224 aaKnown RBP14.34□□□□□ -0.11
PHACTR3-201ENST00000355648 NFKBIBQ15653 356 aa14.33□□□□□ -0.12
PHACTR3-201ENST00000355648 FGD5Q6ZNL6 1462 aa14.33□□□□□ -0.12
PHACTR3-201ENST00000355648 ATXN8OSP0DMR3 200 aa14.32□□□□□ -0.12
PHACTR3-201ENST00000355648 STAC3Q96MF2 364 aa14.32□□□□□ -0.12
PHACTR3-201ENST00000355648 DNMBPQ6XZF7 1577 aa14.32□□□□□ -0.12
PHACTR3-201ENST00000355648 TOPBP1Q92547 1522 aa14.32□□□□□ -0.12
PHACTR3-201ENST00000355648 DHX57Q6P158 1386 aaKnown RBP14.31□□□□□ -0.12
PHACTR3-201ENST00000355648 TPM2P07951 284 aa14.3□□□□□ -0.12
PHACTR3-201ENST00000355648 KIF21AQ7Z4S6 1674 aa14.3□□□□□ -0.12
PHACTR3-201ENST00000355648 DDRGK1Q96HY6 314 aa14.3□□□□□ -0.12
PHACTR3-201ENST00000355648 URB2Q14146 1524 aaKnown RBP14.29□□□□□ -0.12
PHACTR3-201ENST00000355648 PPP1R15AO75807 674 aaPredicted RBP14.29□□□□□ -0.12
PHACTR3-201ENST00000355648 KIF27Q86VH2 1401 aa14.28□□□□□ -0.12
PHACTR3-201ENST00000355648 DDX10Q13206 875 aaKnown RBP14.28□□□□□ -0.12
PHACTR3-201ENST00000355648 L1TD1Q5T7N2 865 aaKnown RBP14.27□□□□□ -0.12
PHACTR3-201ENST00000355648 DNAJC5Q9H3Z4 198 aa14.27□□□□□ -0.12
PHACTR3-201ENST00000355648 CEP162Q5TB80 1403 aa14.27□□□□□ -0.12
PHACTR3-201ENST00000355648 CHMP4AQ9BY43 222 aa14.26□□□□□ -0.13
PHACTR3-201ENST00000355648 IFNLR1Q8IU57 520 aaPredicted RBP14.26□□□□□ -0.13
PHACTR3-201ENST00000355648 POLA1P09884 1462 aaPredicted RBP14.26□□□□□ -0.13
PHACTR3-201ENST00000355648 SMAP1Q8IYB5 467 aaPredicted RBP14.25□□□□□ -0.13
PHACTR3-201ENST00000355648 CUX2O14529 1486 aa14.25□□□□□ -0.13
PHACTR3-201ENST00000355648 GOLGA3Q08378 1498 aa14.25□□□□□ -0.13
PHACTR3-201ENST00000355648 HNRNPUQ00839 825 aaKnown RBP eCLIP14.25□□□□□ -0.13
PHACTR3-201ENST00000355648 KIF21BO75037 1637 aa14.24□□□□□ -0.13
PHACTR3-201ENST00000355648 TNIKQ9UKE5 1360 aa14.24□□□□□ -0.13
PHACTR3-201ENST00000355648 RAD54L2Q9Y4B4 1467 aa14.24□□□□□ -0.13
PHACTR3-201ENST00000355648 FTSJ3Q8IY81 847 aaKnown RBP14.23□□□□□ -0.13
PHACTR3-201ENST00000355648 MAP7D2Q96T17 732 aa14.23□□□□□ -0.13
PHACTR3-201ENST00000355648 RAPGEF2Q9Y4G8 1499 aa14.22□□□□□ -0.13
PHACTR3-201ENST00000355648 SPRYD3Q8NCJ5 442 aa14.21□□□□□ -0.14
PHACTR3-201ENST00000355648 PRXQ9BXM0 1461 aa14.2□□□□□ -0.14
PHACTR3-201ENST00000355648 TEX2Q8IWB9 1127 aa14.2□□□□□ -0.14
PHACTR3-201ENST00000355648 IGF1RP08069 1367 aa14.19□□□□□ -0.14
PHACTR3-201ENST00000355648 DHX37Q8IY37 1157 aaKnown RBP14.19□□□□□ -0.14
PHACTR3-201ENST00000355648 ARID4BQ4LE39 1312 aaPredicted RBP14.19□□□□□ -0.14
PHACTR3-201ENST00000355648 ABCA10Q8WWZ4 1543 aa14.19□□□□□ -0.14
PHACTR3-201ENST00000355648 TCERG1O14776 1098 aaKnown RBP14.18□□□□□ -0.14
PHACTR3-201ENST00000355648 UTP14CQ5TAP6 766 aaKnown RBP14.18□□□□□ -0.14
PHACTR3-201ENST00000355648 MRC2Q9UBG0 1479 aa14.17□□□□□ -0.14
PHACTR3-201ENST00000355648 CHRM1P11229 460 aaPredicted RBP14.17□□□□□ -0.14
PHACTR3-201ENST00000355648 VASPP50552 380 aaPredicted RBP14.17□□□□□ -0.14
PHACTR3-201ENST00000355648 SLC4A2P04920 1241 aa14.17□□□□□ -0.14
PHACTR3-201ENST00000355648 ZFP91Q96JP5 570 aaPredicted RBP14.15□□□□□ -0.14
PHACTR3-201ENST00000355648 ERICH3Q5RHP9 1530 aa14.14□□□□□ -0.15
PHACTR3-201ENST00000355648 MS4A1P11836 297 aa14.14□□□□□ -0.15
PHACTR3-201ENST00000355648 BCCIPQ9P287 314 aaKnown RBP eCLIP14.14□□□□□ -0.15
PHACTR3-201ENST00000355648 ERCC6Q03468 1493 aa14.14□□□□□ -0.15
PHACTR3-201ENST00000355648 SAMD1Q6SPF0 538 aaPredicted RBP14.14□□□□□ -0.15
PHACTR3-201ENST00000355648 VGFO15240 615 aaPredicted RBP14.12□□□□□ -0.15
PHACTR3-201ENST00000355648 PDE4AP27815 886 aa14.12□□□□□ -0.15
PHACTR3-201ENST00000355648 BACH2Q9BYV9 841 aa14.12□□□□□ -0.15
PHACTR3-201ENST00000355648 CARMIL1Q5VZK9 1371 aa14.11□□□□□ -0.15
PHACTR3-201ENST00000355648 TDRD9Q8NDG6 1382 aaKnown RBP14.11□□□□□ -0.15
PHACTR3-201ENST00000355648 WDR97A6NE52 1622 aa14.11□□□□□ -0.15
PHACTR3-201ENST00000355648 TRHP20396 242 aaPredicted RBP14.11□□□□□ -0.15
PHACTR3-201ENST00000355648 MTERF4Q7Z6M4 381 aaKnown RBP14.1□□□□□ -0.15
PHACTR3-201ENST00000355648 TMEM51Q9NW97 253 aa14.1□□□□□ -0.15
PHACTR3-201ENST00000355648 TARBP1Q13395 1621 aaKnown RBP14.09□□□□□ -0.15
PHACTR3-201ENST00000355648 WDR62O43379 1518 aa14.09□□□□□ -0.15
PHACTR3-201ENST00000355648 TNNT2P45379 298 aaPredicted RBP14.09□□□□□ -0.15
PHACTR3-201ENST00000355648 TERF1P54274 439 aa14.07□□□□□ -0.16
PHACTR3-201ENST00000355648 DMTNQ08495 405 aa14.07□□□□□ -0.16
PHACTR3-201ENST00000355648 GAPVD1Q14C86 1478 aa14.06□□□□□ -0.16
PHACTR3-201ENST00000355648 FRAT2O75474 233 aaPredicted RBP14.06□□□□□ -0.16
PHACTR3-201ENST00000355648 ABCA5Q8WWZ7 1642 aa14.05□□□□□ -0.16
PHACTR3-201ENST00000355648 CLIP1P30622 1438 aa14.05□□□□□ -0.16
PHACTR3-201ENST00000355648 SECISBP2LQ93073 1101 aaKnown RBP14.05□□□□□ -0.16
PHACTR3-201ENST00000355648 KIF20AO95235 890 aa14.05□□□□□ -0.16
PHACTR3-201ENST00000355648 BRPF1P55201 1214 aaPredicted RBP14.05□□□□□ -0.16
PHACTR3-201ENST00000355648 ZNF830Q96NB3 372 aaPredicted RBP14.05□□□□□ -0.16
PHACTR3-201ENST00000355648 ZHX1Q9UKY1 873 aaPredicted RBP14.05□□□□□ -0.16
PHACTR3-201ENST00000355648 ZBED9Q6R2W3 1325 aa14.04□□□□□ -0.16
PHACTR3-201ENST00000355648 PPP4R3BQ5MIZ7 849 aa14.04□□□□□ -0.16
PHACTR3-201ENST00000355648 RNF123Q5XPI4 1314 aa14.04□□□□□ -0.16
PHACTR3-201ENST00000355648 THOC2Q8NI27 1593 aaKnown RBP14.04□□□□□ -0.16
PHACTR3-201ENST00000355648 TAF3Q5VWG9 929 aa14.03□□□□□ -0.16
PHACTR3-201ENST00000355648 ESPNB1AK53 854 aa14.02□□□□□ -0.17
PHACTR3-201ENST00000355648 AQRO60306 1485 aaKnown RBP eCLIP14.01□□□□□ -0.17
PHACTR3-201ENST00000355648 IFT140Q96RY7 1462 aa14.01□□□□□ -0.17
PHACTR3-201ENST00000355648 CUL7Q14999 1698 aa14□□□□□ -0.17
PHACTR3-201ENST00000355648 MYCNP04198 464 aaPredicted RBP13.99□□□□□ -0.17
PHACTR3-201ENST00000355648 PLCD3Q8N3E9 789 aa13.99□□□□□ -0.17
PHACTR3-201ENST00000355648 ANP32BQ92688 251 aaKnown RBP13.99□□□□□ -0.17
PHACTR3-201ENST00000355648 PIAS4Q8N2W9 510 aaPredicted RBP13.98□□□□□ -0.17
PHACTR3-201ENST00000355648 SIN3AQ96ST3 1273 aa13.98□□□□□ -0.17
PHACTR3-201ENST00000355648 GTPBP4Q9BZE4 634 aaKnown RBP13.98□□□□□ -0.17
PHACTR3-201ENST00000355648 ZNF608Q9ULD9 1512 aaPredicted RBP13.98□□□□□ -0.17
PHACTR3-201ENST00000355648 GOLGA6L3A6NEY3 463 aa13.97□□□□□ -0.17
PHACTR3-201ENST00000355648 XRCC6P12956 609 aaKnown RBP eCLIP13.97□□□□□ -0.17
PHACTR3-201ENST00000355648 CCDC9Q9Y3X0 531 aaKnown RBP13.97□□□□□ -0.17
PHACTR3-201ENST00000355648 SMG6Q86US8 1419 aaKnown RBP13.96□□□□□ -0.17
PHACTR3-201ENST00000355648 KIAA1211Q6ZU35 1233 aa13.96□□□□□ -0.17
PHACTR3-201ENST00000355648 RNF216Q9NWF9 866 aaPredicted RBP13.96□□□□□ -0.17
PHACTR3-201ENST00000355648 FSD2A1L4K1 749 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms