RNA–Protein interactions for RNA: ENST00000355445.7

TMEM116-201, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-201ENST00000355445 EEA1Q15075 1411 aa13.28□□□□□ -0.28
TMEM116-201ENST00000355445 RANGAP1P46060 587 aaPredicted RBP13.28□□□□□ -0.28
TMEM116-201ENST00000355445 TTC37Q6PGP7 1564 aa13.28□□□□□ -0.28
TMEM116-201ENST00000355445 EFCAB5A4FU69 1503 aa13.26□□□□□ -0.29
TMEM116-201ENST00000355445 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.26□□□□□ -0.29
TMEM116-201ENST00000355445 CFAP74Q9C0B2 1584 aa13.26□□□□□ -0.29
TMEM116-201ENST00000355445 U3KPZ7 1027 aaPredicted RBP13.26□□□□□ -0.29
TMEM116-201ENST00000355445 DENND4BO75064 1496 aaPredicted RBP13.25□□□□□ -0.29
TMEM116-201ENST00000355445 PCF11O94913 1555 aaKnown RBP13.25□□□□□ -0.29
TMEM116-201ENST00000355445 RIMS1Q86UR5 1692 aaKnown RBP13.25□□□□□ -0.29
TMEM116-201ENST00000355445 FANCAO15360 1455 aa13.24□□□□□ -0.29
TMEM116-201ENST00000355445 ZMYM4Q5VZL5 1548 aa13.23□□□□□ -0.29
TMEM116-201ENST00000355445 LMTK3Q96Q04 1460 aa13.23□□□□□ -0.29
TMEM116-201ENST00000355445 SIGLEC1Q9BZZ2 1709 aa13.23□□□□□ -0.29
TMEM116-201ENST00000355445 CDK13Q14004 1512 aaKnown RBP13.23□□□□□ -0.29
TMEM116-201ENST00000355445 AKNAQ7Z591 1439 aa13.23□□□□□ -0.29
TMEM116-201ENST00000355445 ARID4BQ4LE39 1312 aaPredicted RBP13.22□□□□□ -0.29
TMEM116-201ENST00000355445 PLEKHD1A6NEE1 506 aa13.21□□□□□ -0.3
TMEM116-201ENST00000355445 ZFYVE16Q7Z3T8 1539 aa13.2□□□□□ -0.3
TMEM116-201ENST00000355445 YEATS2Q9ULM3 1422 aa13.19□□□□□ -0.3
TMEM116-201ENST00000355445 APLP2Q06481 763 aa13.18□□□□□ -0.3
TMEM116-201ENST00000355445 FOXD4L1Q9NU39 408 aa13.18□□□□□ -0.3
TMEM116-201ENST00000355445 HECW1Q76N89 1606 aa13.18□□□□□ -0.3
TMEM116-201ENST00000355445 FBXO41Q8TF61 875 aa13.17□□□□□ -0.3
TMEM116-201ENST00000355445 POGZQ7Z3K3 1410 aa13.16□□□□□ -0.3
TMEM116-201ENST00000355445 MAGI2Q86UL8 1455 aa13.16□□□□□ -0.3
TMEM116-201ENST00000355445 FER1L4A9Z1Z3 1794 aa13.15□□□□□ -0.3
TMEM116-201ENST00000355445 MYO5CQ9NQX4 1742 aa13.14□□□□□ -0.31
TMEM116-201ENST00000355445 PLCH2O75038 1416 aa13.14□□□□□ -0.31
TMEM116-201ENST00000355445 KIF14Q15058 1648 aa13.13□□□□□ -0.31
TMEM116-201ENST00000355445 MYCNP04198 464 aaPredicted RBP13.13□□□□□ -0.31
TMEM116-201ENST00000355445 SCAPERQ9BY12 1400 aa13.13□□□□□ -0.31
TMEM116-201ENST00000355445 ARHGAP35Q9NRY4 1499 aa13.12□□□□□ -0.31
TMEM116-201ENST00000355445 HSPA2P54652 639 aa13.11□□□□□ -0.31
TMEM116-201ENST00000355445 SAMD1Q6SPF0 538 aaPredicted RBP13.11□□□□□ -0.31
TMEM116-201ENST00000355445 ARHGEF12Q9NZN5 1544 aa13.11□□□□□ -0.31
TMEM116-201ENST00000355445 FMN1Q68DA7 1419 aa13.11□□□□□ -0.31
TMEM116-201ENST00000355445 LRRIQ1Q96JM4 1722 aa13.09□□□□□ -0.31
TMEM116-201ENST00000355445 MLECQ14165 292 aa13.09□□□□□ -0.31
TMEM116-201ENST00000355445 EHMT2Q96KQ7 1210 aa13.09□□□□□ -0.31
TMEM116-201ENST00000355445 C9orf84Q5VXU9 1444 aa13.09□□□□□ -0.31
TMEM116-201ENST00000355445 ATP10AO60312 1499 aa13.08□□□□□ -0.32
TMEM116-201ENST00000355445 KDM5CP41229 1560 aa13.07□□□□□ -0.32
TMEM116-201ENST00000355445 TROQ12816 1431 aaPredicted RBP13.07□□□□□ -0.32
TMEM116-201ENST00000355445 ATP1B4Q9UN42 357 aaPredicted RBP13.06□□□□□ -0.32
TMEM116-201ENST00000355445 ZNF518AQ6AHZ1 1483 aa13.06□□□□□ -0.32
TMEM116-201ENST00000355445 PREX1Q8TCU6 1659 aa13.06□□□□□ -0.32
TMEM116-201ENST00000355445 ARHGAP5Q13017 1502 aa13.06□□□□□ -0.32
TMEM116-201ENST00000355445 UBTFP17480 764 aaKnown RBP13.05□□□□□ -0.32
TMEM116-201ENST00000355445 EFCAB2Q5VUJ9 269 aa13.05□□□□□ -0.32
TMEM116-201ENST00000355445 DIP2CQ9Y2E4 1556 aa13.04□□□□□ -0.32
TMEM116-201ENST00000355445 ABCA6Q8N139 1617 aa13.04□□□□□ -0.32
TMEM116-201ENST00000355445 CDC42BPBQ9Y5S2 1711 aa13.03□□□□□ -0.32
TMEM116-201ENST00000355445 CLIP1P30622 1438 aa13.03□□□□□ -0.32
TMEM116-201ENST00000355445 CDK11AQ9UQ88 783 aaPredicted RBP13.03□□□□□ -0.32
TMEM116-201ENST00000355445 REREQ9P2R6 1566 aa13.02□□□□□ -0.32
TMEM116-201ENST00000355445 PREX2Q70Z35 1606 aa13.02□□□□□ -0.32
TMEM116-201ENST00000355445 ABCC1P33527 1531 aa13.01□□□□□ -0.33
TMEM116-201ENST00000355445 ITSN2Q9NZM3 1697 aa13□□□□□ -0.33
TMEM116-201ENST00000355445 CAPN15O75808 1086 aa13□□□□□ -0.33
TMEM116-201ENST00000355445 AFAP1Q8N556 730 aa13□□□□□ -0.33
TMEM116-201ENST00000355445 CEBPAP49715 358 aaPredicted RBP12.99□□□□□ -0.33
TMEM116-201ENST00000355445 STRCQ7RTU9 1775 aa12.99□□□□□ -0.33
TMEM116-201ENST00000355445 C3P01024 1663 aa12.98□□□□□ -0.33
TMEM116-201ENST00000355445 MLH3Q9UHC1 1453 aa12.98□□□□□ -0.33
TMEM116-201ENST00000355445 ZBTB22O15209 634 aa12.97□□□□□ -0.33
TMEM116-201ENST00000355445 CERKQ8TCT0 537 aa12.97□□□□□ -0.33
TMEM116-201ENST00000355445 CCDC18Q5T9S5 1454 aa12.97□□□□□ -0.33
TMEM116-201ENST00000355445 CASKIN1Q8WXD9 1431 aa12.97□□□□□ -0.33
TMEM116-201ENST00000355445 TRAPPC8Q9Y2L5 1435 aa12.97□□□□□ -0.33
TMEM116-201ENST00000355445 CDC42BPAQ5VT25 1732 aa12.97□□□□□ -0.33
TMEM116-201ENST00000355445 AGLP35573 1532 aa12.96□□□□□ -0.33
TMEM116-201ENST00000355445 UHRF1BP1Q6BDS2 1440 aa12.96□□□□□ -0.33
TMEM116-201ENST00000355445 KIDINS220Q9ULH0 1771 aa12.95□□□□□ -0.34
TMEM116-201ENST00000355445 MYT1LQ9UL68 1186 aa12.95□□□□□ -0.34
TMEM116-201ENST00000355445 SPINK5Q9NQ38 1064 aaPredicted RBP12.93□□□□□ -0.34
TMEM116-201ENST00000355445 ZNF219Q9P2Y4 722 aaPredicted RBP12.93□□□□□ -0.34
TMEM116-201ENST00000355445 FYCO1Q9BQS8 1478 aa12.92□□□□□ -0.34
TMEM116-201ENST00000355445 SAMD9LQ8IVG5 1584 aa12.92□□□□□ -0.34
TMEM116-201ENST00000355445 SYCP2Q9BX26 1530 aa12.9□□□□□ -0.34
TMEM116-201ENST00000355445 MROH2AA6NES4 1674 aa12.89□□□□□ -0.35
TMEM116-201ENST00000355445 SETD1BQ9UPS6 1966 aaKnown RBP12.88□□□□□ -0.35
TMEM116-201ENST00000355445 GPATCH8Q9UKJ3 1502 aaKnown RBP12.87□□□□□ -0.35
TMEM116-201ENST00000355445 PTPRTO14522 1441 aa12.87□□□□□ -0.35
TMEM116-201ENST00000355445 CNTLNQ9NXG0 1405 aa12.87□□□□□ -0.35
TMEM116-201ENST00000355445 INO80Q9ULG1 1556 aaPredicted RBP12.87□□□□□ -0.35
TMEM116-201ENST00000355445 PLXNC1O60486 1568 aa12.86□□□□□ -0.35
TMEM116-201ENST00000355445 SUPT6HQ7KZ85 1726 aaKnown RBP12.86□□□□□ -0.35
TMEM116-201ENST00000355445 ATP7AQ04656 1500 aa12.86□□□□□ -0.35
TMEM116-201ENST00000355445 ESF1Q9H501 851 aaKnown RBP12.86□□□□□ -0.35
TMEM116-201ENST00000355445 NCOA1Q15788 1441 aa12.86□□□□□ -0.35
TMEM116-201ENST00000355445 LTBP4Q8N2S1 1624 aa12.85□□□□□ -0.35
TMEM116-201ENST00000355445 ZNF777Q9ULD5 760 aaPredicted RBP12.85□□□□□ -0.35
TMEM116-201ENST00000355445 CLTCQ00610 1675 aaKnown RBP12.84□□□□□ -0.35
TMEM116-201ENST00000355445 CAMSAP1Q5T5Y3 1602 aa12.83□□□□□ -0.36
TMEM116-201ENST00000355445 MYO3AQ8NEV4 1616 aa12.83□□□□□ -0.36
TMEM116-201ENST00000355445 NPATQ14207 1427 aa12.83□□□□□ -0.36
TMEM116-201ENST00000355445 ZNF142P52746 1687 aaPredicted RBP12.82□□□□□ -0.36
TMEM116-201ENST00000355445 SPAG9O60271 1321 aaKnown RBP12.82□□□□□ -0.36
TMEM116-201ENST00000355445 KIAA1107Q9UPP5 1409 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms